Basic Information

Gene Symbol
ct
Assembly
GCA_955652365.1
Location
OY019132.1:207861-220874[-]

Transcription Factor Domain

TF Family
CUT
Domain
Homeobox|CUT
PFAM
PF02376
TF Group
Helix-turn-helix
Description
The CUT domain is a DNA-binding motif which can bind independently or in cooperation with the homeodomain, often found downstream of the CUT domain. Multiple copies of the CUT domain can exist in one protein (eg Swiss:P10180).
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 1.7e-26 1.6e-22 80.0 0.0 3 71 539 608 537 614 0.94
2 3 7.8e-32 7.6e-28 97.0 0.0 3 77 959 1034 957 1036 0.96
3 3 8.8e-31 8.5e-27 93.7 0.0 3 77 1176 1251 1174 1253 0.96

Sequence Information

Coding Sequence
ATGTTGACTTCGAACTTCCTTAATCGCGTGCTCCTTCCGATGAGAAATGGCGAAGAAGAAGGGAGTATAAGAATTAAAGCACTTATAGACGAGGTTAACCGACTGCAAACCCTCCAAGAAACCCACATTGTACAAATAAAAAGACTTGAAGATAATCTAGAAGCGAAGCGTCAACAGATTCTAAGACTGGAAGCACGCCTCGAGCAGAAGCATCCTTTAAAGAGTGATGTTCCACCTGCGCCAAAACCAAGTCCAGACCTTTACCGGGGGGATGAGGATGCCTCATCCTCGGCAACAGACCCTTCTGCATTGACGACAGTTGCCAATGCAGAtgaattacaaataaaaaaggaaaatcaGACACCACTTGGAATCGACATCACAAGCCAGTCAGttgcggttgctgctgctgctgttgccgccGCAGCCAACGATCCCAAGCAGTTCCAGGAACTTTTGCTTGAGAGAACCAAGGCATTGGCAGCTGCAGCACATGCCTCCACCGAGGCGCTAAAATCCGAAGGAATATCCAGTGACACGACATCGGCAGATACCAATAGGGACACTGCTGAGAATGAACCACTTAATTCTGATCAGAACGACCCAAATCACCAACAGGAGCAGCAACAGAAGCTGCGACCCCAGTCAAAATCAATTGAACCTGAAATGCCCACAAATCAGGTCACATCGTCGTCCAACTTTCAGAGCGTTGACCAGTTCGGATCTCTGCTAGGTGGTGAGCTGGCCCATTCTTACTGGCGCCGTGGCTTTGATTTGTCAGGCGAGCTGAAGTTGCTACCGCCGCCACATCACTTGGCCCTCGCACCACCGACCTCGCTGCCATCTGCACAACAGCCGTCACCAGCAGCAGTCGCCCCCGTGTCGATAGCACACCCACCGCCATCgataacagcaacaacaaacccAACGCCAAAAACGCCAACATCaatctttcaaaatttcccaTCTATGCTTTCGTGCCGATCGCCTCCACCACTCTCAATGTCGGCCACAGGACCATCAACCGCTACCCTCTTGAGTCAGCTAGTTAATTCAACCTTCTCATCAAACTCAACTCCTTCTCTTCGAACAGATACCCACTCTGCGTTAACGACATCAAGCACAACTACCACTGGCACCCACCTGCAGCAGCTTCATCAGCAGCACCATCAGCATCATCACCAGCAtcagcagcaccagcaccaacaacagcaacaaaccaCTGCTCTAcaacatcatcagcagcagccaCAACATCAGCATCAAGATTATGAAAAAGCCAACAGCCATCAAGACTCATCGTCCACGGCGAGCACACCCAATCTCCAAGATCAGCGCTCCAATGACGAACATTTAACTGGCGGAAACATTAAGTCCTCCAAGGAGGACAATAATAATTCCCTGGGTTCCCTCGCACATCTACCACCAGCATTCTTACCGGGGCTGCCATTCCAATTCCAAGATCGTGGTCACTTCCGTTTTGCCGAAGACATCCAACTTCCTCCGGGTGCATCAATGGCAGGCCGTCTCGGGGAATCCCTCATTCCCAAAGGGGATCCTATGGAGGCAAAACTTCAGGAAATGCTCCGCTATAATATGGACAAGTATGCCAATCAGAGCCTGGACACACTACACATATCAAGACGTGTACGCGAGCTGCTCTCCGTCCACAACATCGGACAGAGGCTTTTTGCCAAATACATCCTCGGCCTCAGTCAAGGTACTGTGTCTGAACTCCTGTCCAAGCCAAAGCCCTGGGATAAGCTTACGGAGAAAGGTCGTGACAGCTACCGCAAAATGCACGCCTGGGGATGTGATGATAACGCTGTGATGTTACTCAAGTCTCTGATACCGAAAAAAGACTCAGGCATACCACAATACGGTCGAAACGAGGACTCTATGTCGGACGATCGTATAGCGCATATCTTAAACGAAGCTTCCAGCCTTATGAAGACCCCTCAGGGATCGGGTGCACAACTGCAGCAACAAATTCAACATGAAGCTCAacgtcaacaacaacagcaacaacatcaccaGCAGGCTTCTTCCGTCGAGGATTCGCATAGTAATGAGGACTCTAAATCTCCCCATGCCTCCTGCATCTCTCCATTTTACAAGGACTCAGCTTCACATCAGCAGCGGCAAGATATTCATCGGCGAAGCGTAAAACCTGACGATATGTCGCAAGACAAGGTTGCGCGCATTTACCAGGAAGAGTTAGCAAAGCTGATGACACGCACTCCGCGTGATGCATTTCCAAGTTTTCTATTTCCACACTTTTTCAGTGGGGCTGGTGGCCTACCGCCCACCAACAGTGCAATTCCTCCCGACGATAATATTCGTATCACTTTGGAAGCATACCACCGCGAGATGGcaaaattacaacaaaatagTAGTGGAAATATACCcaattttccaacattttctagcCTTATGGCGCTACAACAGCAAGTTTTAAACGGAGCCCAAGATCTATCCGTCCCGAAAGAGAACGAAATGAAAGTTAATGGCCAACGGAACTCTCTGGAACCATGCGAGAATAATCAAACCAAAGAATCCAGCGATGAGGCTGCACTGCGCCATTCGAGCGCATTTAGTCTAGTTCGCAATAAACCAGAATCTACGTCGGTGCCGAATTCGAATGCTAATACAAACACAAATTCGGCTGCTCCCAGTCCTCTCAGTAATTCAATTCTGCCGCCCGCGATGACACCCACAGACGACTTCTCCACTGCAGCCAGTCCATTGCAACGAATGGCGTCCATCACCAACTCGTTGATTACGCAGCCTCCGGTGACACCGCATCATACCCAGCCACAGCGACCAACGAAAGCTGTTCTTCCACCCATTACACAGCAGCAATTTGACATGTTTAACAATCTAAATACGGAAGAAATTGTCCGTCGAGTGAAAGAGGCCTTGTCACAGTACTCTATTAGCCAGAGACTGTTTGGAGAATCTGTTCTTGGTCTGTCGCAAGGCTCTGTATCGGATCTACTTGCAAGACCTAAACCATGGCACATGCTTACCCAAAAGGGTCGGGAACCCTTCATCCGTATGAAAATGTTTCTGGAAGACGAGAATGCCGTTCATAAACTAGTCGCTAGCCAGTACAAGATTGCTCCCGAGAAGCTTATGCGTACCGGTAGCTACAGTGGAAGTCCGCAAATACCTCAAGGCCTTGCCAACAAAATGAACAGCATCCCAATGCAGAAAATGATGAACGAGTTAAAGATGCAGGAGCCGCAGGCGCAGCATATAATGCAGCAGATGCAGGCAGCTTCTGCAATGGCAGTAGCTGCGGCCGCTGGACATATGCAAAATGCACAACATCAGGGCATGCTGCTAACTACACCAGGGCTTCCACCGCAGCACACCATAAGCCTTCAGCAAGCGGCTGCCGCAGCTGCAACCGAAAAGAAGCCTATGATGATGCCAATTCACTCACCACATCAAACTAACGCCATGCGTACCAGCATGCACCAACACATGTCACCAACTGTGTATGAGATGGCTGCACTCACGCAAGACCTTGACACACAGGTCATTACCACCAAGATAAAGGAAGCTCTTCTTGCAAACAACATAGGCCAGAAAATTTTTGGAGAAGCAGTACTAGGTTTATCTCAAGGTTCTGTTTCTGAACTGCTCTCGAAACCGAAACCATGGCACATGCTCAGCATAAAGGGTCGAGAGCCATTTATTAGAATGCAACTTTGGCTATCAGATGCTAACAATGTGGAACGATTGCAGGTACTTAAGAACGAGCGCCGAGAAGCCAGCAAACGGCGGCGTTCCACTGGGCCCAACCAGCAGGACAATAGTTCAGACACCAGTAGTAACGATACCGCCGATTTTTACACCAGCAGTCCTGGGCCAGGTTCAGTAGGATCTGTGGGTGCGCCACCGAACAAAAAGCAACGAGTTCTGTTTTCAGAAGAGCAAAAAGAAGCCCTGCGCTTGGCATTCGCCCTCGATCCATACCCAAATGTGGGAACAATCGAATTTCTCGCCAACGAACTCGGTTTAGCCACACGTACAATTACGAACTGGTTCCATAATCACCGCATGCGCCTCAAGCAGCAGGTTCCACATGGTCAACCGACGGAGCCCGTACCAAGCCGCGAAAATACCAACGCAACACCCTTCGATCCCGTCCAATTCCGTATACTCCTTAATCAAAGACTGATGGAATTGCAGAAAGAGCGTATGGGCCTGAGTAACGCACCTATTCCCTACCCACCTTATTTCGCCGCCAATCCGAATCTCGCGGCATTAATTGGACGGGGTCTCCTCCCCGGAGGAGGCGAACCAGATCTACAAGCACTAAACAACGCCTTCAAGGAACAAATGAGTGGTCTAGATCTTTCATTAAAGCGAGAGCGCGACGACGACTTTGAAGATGATGGCGAAGGTGACAGCCACCTGTCTGATAATGAGTCCATCAACGGAAGCGACGAAAAGTCTGAGTTAAGCGAAACACCGCGGTCATCACTCTCCGGAGGGGGAGCCCAGTCACGCACATCACGTCGAAAGCCCGCCGCCCCGCAGTGGGTTAATCCTGAGTGGCAAGGAGACGGAAAGACTGGTCTCATACCACCGCTTCCAGGGGGTCCTGCAGATAAAGAGGTCATAATCAATGGCGTCTGTGTAATGCAACAGCAAGCGGCCGACTACAGTCGAAAGCCAACCGTTGCAGCCGCAGACGATGAGGAAGAGGTCGCATCCGATGGCAACGAAGACGAACCTTCAAACCACAATCGCACCCAGTCCTCCGATTGTGAGGAACCCCCCACAGATATCGATCAGCGATTCATGGAGCCTGAGGTGCGAATCAAACAGGAAGACTGTGACAGCAACGATAGCCATCAGGAAAACCACGACACCGACGTGAGAAAACAACCCATCCACCAGGAGGACGATGATGACACGCCTGGTGTATGGAACTACTAG
Protein Sequence
MLTSNFLNRVLLPMRNGEEEGSIRIKALIDEVNRLQTLQETHIVQIKRLEDNLEAKRQQILRLEARLEQKHPLKSDVPPAPKPSPDLYRGDEDASSSATDPSALTTVANADELQIKKENQTPLGIDITSQSVAVAAAAVAAAANDPKQFQELLLERTKALAAAAHASTEALKSEGISSDTTSADTNRDTAENEPLNSDQNDPNHQQEQQQKLRPQSKSIEPEMPTNQVTSSSNFQSVDQFGSLLGGELAHSYWRRGFDLSGELKLLPPPHHLALAPPTSLPSAQQPSPAAVAPVSIAHPPPSITATTNPTPKTPTSIFQNFPSMLSCRSPPPLSMSATGPSTATLLSQLVNSTFSSNSTPSLRTDTHSALTTSSTTTTGTHLQQLHQQHHQHHHQHQQHQHQQQQQTTALQHHQQQPQHQHQDYEKANSHQDSSSTASTPNLQDQRSNDEHLTGGNIKSSKEDNNNSLGSLAHLPPAFLPGLPFQFQDRGHFRFAEDIQLPPGASMAGRLGESLIPKGDPMEAKLQEMLRYNMDKYANQSLDTLHISRRVRELLSVHNIGQRLFAKYILGLSQGTVSELLSKPKPWDKLTEKGRDSYRKMHAWGCDDNAVMLLKSLIPKKDSGIPQYGRNEDSMSDDRIAHILNEASSLMKTPQGSGAQLQQQIQHEAQRQQQQQQHHQQASSVEDSHSNEDSKSPHASCISPFYKDSASHQQRQDIHRRSVKPDDMSQDKVARIYQEELAKLMTRTPRDAFPSFLFPHFFSGAGGLPPTNSAIPPDDNIRITLEAYHREMAKLQQNSSGNIPNFPTFSSLMALQQQVLNGAQDLSVPKENEMKVNGQRNSLEPCENNQTKESSDEAALRHSSAFSLVRNKPESTSVPNSNANTNTNSAAPSPLSNSILPPAMTPTDDFSTAASPLQRMASITNSLITQPPVTPHHTQPQRPTKAVLPPITQQQFDMFNNLNTEEIVRRVKEALSQYSISQRLFGESVLGLSQGSVSDLLARPKPWHMLTQKGREPFIRMKMFLEDENAVHKLVASQYKIAPEKLMRTGSYSGSPQIPQGLANKMNSIPMQKMMNELKMQEPQAQHIMQQMQAASAMAVAAAAGHMQNAQHQGMLLTTPGLPPQHTISLQQAAAAAATEKKPMMMPIHSPHQTNAMRTSMHQHMSPTVYEMAALTQDLDTQVITTKIKEALLANNIGQKIFGEAVLGLSQGSVSELLSKPKPWHMLSIKGREPFIRMQLWLSDANNVERLQVLKNERREASKRRRSTGPNQQDNSSDTSSNDTADFYTSSPGPGSVGSVGAPPNKKQRVLFSEEQKEALRLAFALDPYPNVGTIEFLANELGLATRTITNWFHNHRMRLKQQVPHGQPTEPVPSRENTNATPFDPVQFRILLNQRLMELQKERMGLSNAPIPYPPYFAANPNLAALIGRGLLPGGGEPDLQALNNAFKEQMSGLDLSLKRERDDDFEDDGEGDSHLSDNESINGSDEKSELSETPRSSLSGGGAQSRTSRRKPAAPQWVNPEWQGDGKTGLIPPLPGGPADKEVIINGVCVMQQQAADYSRKPTVAAADDEEEVASDGNEDEPSNHNRTQSSDCEEPPTDIDQRFMEPEVRIKQEDCDSNDSHQENHDTDVRKQPIHQEDDDDTPGVWNY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00671394;
90% Identity
iTF_00670844;
80% Identity
iTF_00670844;