Basic Information

Insect: Eriosoma lanigerum
Gene Symbol: -
Assembly: GCA_013282895.1
Location: scaffold:7728025-7738145[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 4.5e-06 0.0006 20.7 3.6 1 23 237 259 237 259 0.98

2 14 0.00046 0.061 14.4 3.7 1 23 265 287 265 287 0.97

3 14 0.0012 0.16 13.1 1.8 1 23 374 396 374 397 0.94

4 14 0.00015 0.019 16.0 1.0 1 23 431 453 431 453 0.98

5 14 0.17 23 6.3 2.6 2 23 471 492 470 492 0.91

6 14 0.027 3.6 8.9 0.1 2 23 503 525 502 525 0.92

7 14 8.4e-05 0.011 16.7 2.1 1 23 532 554 532 554 0.98

8 14 0.0014 0.19 12.9 3.5 3 23 561 581 560 581 0.93

9 14 0.0087 1.2 10.4 0.0 3 23 588 608 586 608 0.95

10 14 2e-05 0.0026 18.7 0.2 1 23 624 646 624 646 0.98

11 14 0.00014 0.019 16.0 0.2 3 23 654 674 652 674 0.97

12 14 1.5e-05 0.002 19.1 0.1 1 23 680 702 680 703 0.95

13 14 0.00021 0.027 15.5 1.3 1 23 716 738 716 738 0.95

14 14 3.7e-06 0.00049 21.0 0.1 2 23 1014 1036 1013 1036 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	4.5e-06	0.0006	20.7	3.6	1	23	237	259	237	259	0.98
2	14	0.00046	0.061	14.4	3.7	1	23	265	287	265	287	0.97
3	14	0.0012	0.16	13.1	1.8	1	23	374	396	374	397	0.94
4	14	0.00015	0.019	16.0	1.0	1	23	431	453	431	453	0.98
5	14	0.17	23	6.3	2.6	2	23	471	492	470	492	0.91
6	14	0.027	3.6	8.9	0.1	2	23	503	525	502	525	0.92
7	14	8.4e-05	0.011	16.7	2.1	1	23	532	554	532	554	0.98
8	14	0.0014	0.19	12.9	3.5	3	23	561	581	560	581	0.93
9	14	0.0087	1.2	10.4	0.0	3	23	588	608	586	608	0.95
10	14	2e-05	0.0026	18.7	0.2	1	23	624	646	624	646	0.98
11	14	0.00014	0.019	16.0	0.2	3	23	654	674	652	674	0.97
12	14	1.5e-05	0.002	19.1	0.1	1	23	680	702	680	703	0.95
13	14	0.00021	0.027	15.5	1.3	1	23	716	738	716	738	0.95
14	14	3.7e-06	0.00049	21.0	0.1	2	23	1014	1036	1013	1036	0.96

Sequence Information

Coding Sequence: ATGCAGTCGGCATTACACAATTTTACGCCATTGTCGGCAGATTTGAAGTCGCAAATTGCGAACACTCGCAAAAATTTGGTGTTACTTCCCTTGAAAATCATGGACATTGATTTTGTGGAAGAAATTGTGCCTATCCACCCTGATGACCAAGCACTAGATTATAATAGGACAGATGTTTTATGTTCGAACGATGTTGATGTCTCAGCTATCAAAACTGAGTATTTCGATACTGATGATATAAATGACGCTATGTCGTCTGACAATTGTTTAGTACAAACCATAGACCCTTCATATTTCACTCACAGTGGTACACGCAAAAATGAGCTTAACAACATGACTAGAGCAGTCATGGAATCCGTGCCATATGCTGATGGATTGCAATACTTAGCTGCCATATCTTCATTTAGTGATAATTTTAAGGAAATGGACCCAGGACGACAAATCAAAGAAGAGAATGTTTTATTTGAGTCTAGTGATGATGAAGGTCAACAAATGTGTCATGAAGAATATCAAGATTATTTTGATGTTCAAGAAGAAGTTGTTGTTCAAGAATGCCCTGAGCAAGAAGTAATTACTCAAAGTTGGGATATTAATCGCTCTACTAATATTGATACTATATTAGATGAAGAAGTTCAATGTTTATCATCAGCAATTGATGATGATATTCCAATACCAGAAGGTGAAGAAGCATCATCTACTGTCAATCCATATCCATGTGATTTCTGTAGTCGAAGATTCAATAGAAAATCTCATTTAATGAATCATATGGTTACTCATCAATCAGAGCGCCCTTTTTGTTGTGCATTATGTGGTGTTCGTTATCGACGTAAATGTGATTTAGCCAATCATATGAAAATACATATAGGTCCTGAGAATACCTCGGAAAATGATAACCAACATACATCTGTATCAAAAGTAATGAACAAATTAATGTTCGTGGATCCAATACGTAAAAAAAGTGTATCAGCCGATGAAGATAATGAAGAAAAAGAAGATATGTATCAAGAACAAAAACATCGTGGTCGTGGTCGAGGAAAAGGACGAGGTAGAGGAAGAGGTCGTCCAATAAAAGATCGTTTATTGACTCTTGGTTGGAATTCTGAATTATATTCTAAACCACATACATGTAATCCATGTGGAATTTCATTTACACGTGAAAAAGCACTTCTCAATCATGCCCGTCTTCATCATATTGATGATTGTGTAAATATTATAACTACCCAAAAAACAAATTCAGATAGCTATGAGCTAACAATATTGTCTAATCCTGATACTGATGAACCTGTTAATTACCCTTGTGATTCATGTGGATCAGTTTTTGATAGATTTGATTTCTTGAAGCGTCATCAAAGGCAACATATGAAAAAAGAACTTGGAAACGTTGAAGAAGAAATTTATGAAGAAGCACACATGTGTATTCATTGTGGATTGTTCTTTAAGTCTATGCGAGAGTTAGAAATTCATACTGAACAGCATTTAATTCCTACAAATATTTCAGAAAAATCAAAATGTTTAGCTTGTGGTGAAACATTTGAAAGCACTGATGAACTGTCAGACCATGTGTTACAAATGCATAATGATTCATTACCTGAATATTCTTGTAAACTTTGTGGGAAACAGTGTAAAGATGATAAAGCTCTCCAAAAACATTTAATGGTTCATGATACATCTGATAATAAATGTATAATGTGTGGCAAAAGATTCCATTCTAGAGCACGGCTTAAACGGCATATGATAACACATCGTGAAAAAGGAGTTATTTGTGACATATGTGGTGAAGAAGTACCTGACAAACGTGCACTTATTAATCATAAAGCAAGTCATGCAAATACTATAAGTGTTTCACGGAATTCATTAACTGAAAAAATATTTCCTTGTACAAGTTGTGGAAAAGTATTTGGATCCAGGTCATCTCAACAAATCCACATAAGAATACATACAGGAGAGCGACCTTATGGTTGCAGATATTGTGACAAAGCTTTTGCTGATGGTGGTACACTCAGAAAACATGAACGAATACATACTGGTGAAAAACCATACGCTTGTCCAGTTTGCCCAAAAGCATTCAATCAGAGAGTTGTATTACGTGAACATATCCGAGCACATCATGCTGGTACTGAAGCGAGAGGTGGTAAAGTCAATTTTTTTGAGTGTAAAGTGTGTGGTTATTTGTTTCGATCTTCAGCAGAGCTTTGTACACATTTAGTACAACATAGTGATGAAAATACAGCAAAATCTAGAGTAGTTCCTGTTGGACCTCGTAAATATAAACGGCGTAGCAAATTGGGTAATTGTAAAGATACATGGTGTTTAGTAGAAAAAGTGTTTACAGTCATGTCAGGTCAGTCAGAGACAGAAAGTTGTGAAGATGAACCAATGGCTACAGTAGAAGAACAAGCTGTACAGTCGATTATTGATCAGGATGAATTGTCATACAATGCTAAATCTTTAACTAGTCCTAGTAAATGTCCAGTTAAATCATACAAGATTGTTAATGGAAAATTGGTTAAAAATGAACAAAAATCTTTTAAACAAGTCTCATTAGGATCAAAGTATGTTTTCAAACCTGAGCCTGTACCAAAGAAGCATATGTTTGTACTAAAAGATGGCGAGTGTACCAGAACGTGTTCAACAGCTCTTTATTATTCCTCAAAATCTGATCCAGTAGATACTGATTCACCATTAGGAGAAGAGTCTAAAGAAAATGATAATCCAGAAGATCCTGAAGATCAGATATCTGTTGAAGATATGGATTTAACGAATATTAAGATTGAACCAAATAATGATCAGTCAGATTTTGAAGCGCAAGATTATGAGAACATTTGTAGCAACATTGAGTATGACAATCAAGAGGAAGTTGAGTATTTCATACAGAATAGTGGTGAATATGGTGCTCAAGAAGATTTAATACTGGAAGCTGTGAATGATGAAAGTTTAATTGAGACTGAATTAGTGTTTGATTCAGATTATGTTGAGGAAGTTGGTGCTAATATTGAGTTAAGTACTGAAGAAATGGCACCAGTATACTTAGAAACTATTTCTTGTGATATTTGTGATGAAGTATTTGAGGATAGAAAAGAACTTATGAGACACATTCAAACTATGCACATCGGATAA
Protein Sequence: MQSALHNFTPLSADLKSQIANTRKNLVLLPLKIMDIDFVEEIVPIHPDDQALDYNRTDVLCSNDVDVSAIKTEYFDTDDINDAMSSDNCLVQTIDPSYFTHSGTRKNELNNMTRAVMESVPYADGLQYLAAISSFSDNFKEMDPGRQIKEENVLFESSDDEGQQMCHEEYQDYFDVQEEVVVQECPEQEVITQSWDINRSTNIDTILDEEVQCLSSAIDDDIPIPEGEEASSTVNPYPCDFCSRRFNRKSHLMNHMVTHQSERPFCCALCGVRYRRKCDLANHMKIHIGPENTSENDNQHTSVSKVMNKLMFVDPIRKKSVSADEDNEEKEDMYQEQKHRGRGRGKGRGRGRGRPIKDRLLTLGWNSELYSKPHTCNPCGISFTREKALLNHARLHHIDDCVNIITTQKTNSDSYELTILSNPDTDEPVNYPCDSCGSVFDRFDFLKRHQRQHMKKELGNVEEEIYEEAHMCIHCGLFFKSMRELEIHTEQHLIPTNISEKSKCLACGETFESTDELSDHVLQMHNDSLPEYSCKLCGKQCKDDKALQKHLMVHDTSDNKCIMCGKRFHSRARLKRHMITHREKGVICDICGEEVPDKRALINHKASHANTISVSRNSLTEKIFPCTSCGKVFGSRSSQQIHIRIHTGERPYGCRYCDKAFADGGTLRKHERIHTGEKPYACPVCPKAFNQRVVLREHIRAHHAGTEARGGKVNFFECKVCGYLFRSSAELCTHLVQHSDENTAKSRVVPVGPRKYKRRSKLGNCKDTWCLVEKVFTVMSGQSETESCEDEPMATVEEQAVQSIIDQDELSYNAKSLTSPSKCPVKSYKIVNGKLVKNEQKSFKQVSLGSKYVFKPEPVPKKHMFVLKDGECTRTCSTALYYSSKSDPVDTDSPLGEESKENDNPEDPEDQISVEDMDLTNIKIEPNNDQSDFEAQDYENICSNIEYDNQEEVEYFIQNSGEYGAQEDLILEAVNDESLIETELVFDSDYVEEVGANIELSTEEMAPVYLETISCDICDEVFEDRKELMRHIQTMHIG

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01170068;
90% Identity: -
80% Identity: -