Elan008525.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Eriosoma lanigerum
Gene Symbol
Hr39
Assembly
GCA_013282895.1
Location
scaffold:53967428-53971780[-]

Transcription Factor Domain

TF Family
SF-like
Domain
zf-C4|SF-like
PFAM
AnimalTFDB
TF Group
Zinc-Coordinating Group
Description
The ligand binding domain of nuclear receptor steroidogenic factor 1 (SF-1): SF-1, a member of the nuclear hormone receptor superfamily, is an essential regulator of endocrine development and function and is considered a master regulator of reproduction. Most nuclear receptors function as homodimer or heterodimers, however SF-1 binds to its target genes as a monomer, recognizing the variations of the DNA sequence motif, T/CCA AGGTCA. SF-1 functions cooperatively with other transcription factors to modulate gene expression. Phospholipids have been determined as potential ligands of SF-1. Like other members of the nuclear receptor (NR) superfamily of ligand-activated transcription factors, SF-1 has a central well conserved DNA binding domain (DBD), a variable N-terminal domain, a flexible hinge and a C-terminal ligand binding domain (LBD). [1, 8, 3, 11, 6, 5, 12, 10, 9, 2, 4, 7]
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 4 2 2.8e+04 -6.1 9.6 49 142 273 307 118 344 0.53
2 4 2 2.8e+04 -5.7 8.6 49 104 273 329 231 374 0.56
3 4 1e-06 0.015 15.4 0.1 1 57 444 500 444 540 0.62
4 4 7e-71 9.8e-67 226.8 0.0 202 408 552 753 495 753 0.90

Sequence Information

Coding Sequence
ATGCCTTGCCGTGTCGACCGGTCCGCGTATTGGCCATTTCACTCTGCTGTCAGGTCACGCGCAACCGGTTTCCAACGTCCACCGCTGCTGCAGTTGTTGCTTCACCGTGTGCAACACGCCGGGGGCAAAGTGTTGGTGATTAGTGTAAACGGCGATACCAAGATGTGGGGCCACAGCGTACAAGTATCATCGGGTCCAGTCACCGTAACGTCGATTAATTTGATCACCCCTTGTTTGCCAAACACACAGATCACGACAATAAAAGAGGAACCTCATGACAAGGATGGTACAACGACTGAAATGAAAGAGGATGTCATCGACGAAGTAGGTTCTGAGTGTGATCGGGAGGTGAGTAAGATAGATTTCTCTGGAGTGACTATGAGGAGTAAGAAGATGAGAGCGGTCGAAGAAAACATGCCTCGGCCGATGTCCTGGGAAGGAGAATTGTCCGATTCGGAAATGAAACAAGAAGAAGACAGGACTGCGGATGCGCAAACTGGAAATCAAAAATATTTGTTGCCGCGAAACGAGAACCAACAATCTCCAATCAAGCGCATCGTTTACAACGACAATAACTTGGTTGACCGCGTGATGGAGCACGTCAAGAGCAAAGTATCGTCATCGAATAGCGAAATTCCGTTACTCGTCGATAAATTGTTGGGCGGCGGTTACAGCCCGTTACTGCAACACAGGACGAACGGAGTCAAACACCCATCGCACATTCCACCGACTCAAAGCCCTGACTCGGCCATACACTCTTGTTGCTCACCTGCTCAGTCGCCGATTACTTCGAGACACAATCCTCCCTCGTCCTCAGGGTTTTCGTCCCCGTCCACGTTCACGCCGTCGTCGTTATCCAGGAACAATAGCGATGCATCGCAATACGGTGGATCGCAACATAGTTCGTGTTATAGTCAAAGTTATTCTTCGGTATCAGTTTCGCCTACTCAGTTTTCTCCAACACAGTCTCCAATCCAACCGAGACACATACAGAGAAATTTCCATGAATATACCGTGGCAGAGGAAACTAACGGATATGAAGAAAAAATGTCAATGTCGGACATTGGTCAACAGCATGGCATTACATCTGGTATATCAAGACAACAATTGATTAACAGTCCCTGTCCGATTTGTGGCGATAAAATATCAGGCTTTCACTATGGTATATTTTCGTGTGAAAGCTGCAAAGGATTTTTCAAGCGCACAGTGCAAAATCACAAGAATTACGTGTGTTTACATGGTTCCGCATGTTTGATTACAATAGCTACTCGCAAAAAGTGCCCAGCCTGTCGTTTTGACAAGTGCTTAAATATGGGTATGAAACTGGAAGCTATTAGAGTTGATCGAACAAGAGGTGGACGTAGCACTTATCCCTTTACTTACACTATACCGCCATCTAATATTCAATCGCAACACAATGGACAGCACTCTGGTATGGCCAATTCCATAGACAATAAAGTCAAGCAGGAAGAACGAGCGTGCAGATCTCCACCACAAGAAATGGCTAGACTGATCCCTCCGTTATTACAAGAAATAATGGAAGTGGAACATTTATGGACTTATAACGAAGGCTCATTCGAATCATCGAGTGCAAGTGGAAGTTCTTTGAATCACATTGGTGGTGCCAAGGAAATAGCTAAGAGTCGATTAATGGCTGAAAATTCAGGAACGGATTTTCTTTCTAATTTATGCAACATTGCTGACCATCGGCTGTACAAAATAGTAAAATGGTGTAAATCATTACCATTATTTAAAAATATTTCGATTGACGATCAAATATCATTATTGATAAATGCTTGGTGTGAGCTATTGTTGTTCAGTTGTTGTTATCGGTCGGTAAGCAGTCCGGGAGAGATACGAGTCAGTCTAGGCAAGTCTATTTCTTTGGATCAAGCGAGAGATTTAGGTTTAGCACCTTGTATCGAACGTATGTTAAATTTCACTCAACACCTGAGACGTTTGAGAGTGGATCGATATGAATATGTCGCCATGAAAGTCATTGTGCTATTATCATCAGATACAAATGATCTGAAAGAACCGGAAAAAGTCCGTGCATCCCAGGAAAAAGCATTGCATGCATTGCAACAATATACTCTAGCACATTATCCTGATATGCCGTCCAAATTCGGAGAATTGTTACTGCGGATACCTGATTTGCAACGTACTTGTCAGGTCGGAAAAGAAATGTTGTCAATAAAAGGGAAAGAAGGTGAAGGACAAAGCTTTAATCTCTTAATGGAGTTGTTGAGAGGCGATCATTAA
Protein Sequence
MPCRVDRSAYWPFHSAVRSRATGFQRPPLLQLLLHRVQHAGGKVLVISVNGDTKMWGHSVQVSSGPVTVTSINLITPCLPNTQITTIKEEPHDKDGTTTEMKEDVIDEVGSECDREVSKIDFSGVTMRSKKMRAVEENMPRPMSWEGELSDSEMKQEEDRTADAQTGNQKYLLPRNENQQSPIKRIVYNDNNLVDRVMEHVKSKVSSSNSEIPLLVDKLLGGGYSPLLQHRTNGVKHPSHIPPTQSPDSAIHSCCSPAQSPITSRHNPPSSSGFSSPSTFTPSSLSRNNSDASQYGGSQHSSCYSQSYSSVSVSPTQFSPTQSPIQPRHIQRNFHEYTVAEETNGYEEKMSMSDIGQQHGITSGISRQQLINSPCPICGDKISGFHYGIFSCESCKGFFKRTVQNHKNYVCLHGSACLITIATRKKCPACRFDKCLNMGMKLEAIRVDRTRGGRSTYPFTYTIPPSNIQSQHNGQHSGMANSIDNKVKQEERACRSPPQEMARLIPPLLQEIMEVEHLWTYNEGSFESSSASGSSLNHIGGAKEIAKSRLMAENSGTDFLSNLCNIADHRLYKIVKWCKSLPLFKNISIDDQISLLINAWCELLLFSCCYRSVSSPGEIRVSLGKSISLDQARDLGLAPCIERMLNFTQHLRRLRVDRYEYVAMKVIVLLSSDTNDLKEPEKVRASQEKALHALQQYTLAHYPDMPSKFGELLLRIPDLQRTCQVGKEMLSIKGKEGEGQSFNLLMELLRGDH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00340610;
90% Identity
iTF_00941576;
80% Identity
iTF_00670339;