Ehay048566.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Eretmocerus hayati
Gene Symbol
-
Assembly
GCA_029851415.1
Location
CM056744.1:35347277-35361353[+]

Transcription Factor Domain

TF Family
zf-LITAF-like
Domain
zf-LITAF-like domain
PFAM
PF10601
TF Group
Zinc-Coordinating Group
Description
Members of this family display a conserved zinc ribbon structure [3] with the motif C-XX-C- separated from the more C-terminal HX-C(P)X-C-X4-G-R motif by a variable region of usually 25-30 (hydrophobic) residues. Although it belongs to one of the zinc finger's fold groups (zinc ribbon), this particular domain was first identified in LPS-induced tumour necrosis alpha factor (LITAF) which is produced in mammalian cells after being challenged with lipopolysaccharide (LPS)[2]. The hydrophobic region probably inserts into the membrane rather than traversing it. Such an insertion brings together the N- and C-terminal C-XX-C motifs to form a compact Zn2+-binding structure [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 20 0.1 1e+03 1.6 0.0 6 38 38 70 33 80 0.74
2 20 0.1 1.1e+03 1.6 0.0 6 38 91 123 86 132 0.73
3 20 0.1 1.1e+03 1.6 0.0 6 38 144 176 139 185 0.73
4 20 0.1 1.1e+03 1.6 0.0 6 38 197 229 192 238 0.73
5 20 0.1 1.1e+03 1.6 0.0 6 38 250 282 245 291 0.73
6 20 0.1 1.1e+03 1.6 0.0 6 38 303 335 298 344 0.73
7 20 0.1 1.1e+03 1.6 0.0 6 38 356 388 351 397 0.73
8 20 0.1 1.1e+03 1.6 0.0 6 38 409 441 404 450 0.73
9 20 0.1 1.1e+03 1.6 0.0 6 38 462 494 457 503 0.73
10 20 0.1 1.1e+03 1.6 0.0 6 38 515 547 510 556 0.73
11 20 0.1 1.1e+03 1.6 0.0 6 38 568 600 563 609 0.73
12 20 0.1 1.1e+03 1.6 0.0 6 38 621 653 616 662 0.73
13 20 0.1 1.1e+03 1.6 0.0 6 38 674 706 669 715 0.73
14 20 0.1 1.1e+03 1.6 0.0 6 38 727 759 722 768 0.73
15 20 0.099 1e+03 1.7 0.0 6 38 780 812 775 824 0.74
16 20 0.38 3.9e+03 -0.2 0.0 6 30 833 857 828 873 0.69
17 20 0.1 1.1e+03 1.6 0.0 6 38 886 918 881 927 0.73
18 20 0.099 1e+03 1.7 0.0 6 38 939 971 934 983 0.74
19 20 0.35 3.6e+03 -0.1 0.0 6 30 992 1016 987 1033 0.68
20 20 4.1 4.2e+04 -3.5 0.0 7 21 1046 1060 1041 1062 0.75

Sequence Information

Coding Sequence
ATGAATCATCCTTCAGGCGTCTGGGTTTCAGCTCTGCAGTTCCTCACCAGCTCTCCACGTGGGTGCATAGGCGCGCCGAAAGCCCAAGCAACATCGCAGTGGAGACGAAGTATCAAGGCGCCCAGTTGTACGCGCGCAGTCACAACCAAGAACAAAGAATCCGCAGCGGAAGCGGGCGTCTGGGTTTCAGCTCTGCAGTTCCTCACCAGCTCTCCACGTGGGTGCATAGGCGCGCCGAAAGCCCAAGCAACATCGCAGTGGAGACGAAGTATCAAGGCGCCCAGTTGTACGCGCGCAGTCACAACCAAGAACAAAGAATCCGCAGCGGAAGCGGGCGTCTGGGTTTCAGCTCTGCAGTTCCTCACCAGCTCTCCACGTGGGTGCATAGGCGCGCCGAAAGCCCAAGCAACATCGCAGTGGAGACGAAGTATCAAGGCGCCCAGTTGTACGCGTGCAGTCACAACCAAGAACAAAGAATCCGCAGCGGAAGCGGGCGTCTGGGTTTCAGCTCTGCAGTTCCTCACCAGCTCTCCACGTGGGTGCATAGGCGCGCCGAAAGCCCAAGCAACATCGCAGTGGAGACGAAGTATCAAGGCGCCCAGTTGTACGCGCGCAGTCACAACCAAGAACAAAGAATCCGCAGCGGAAGCGGGCGTCTGGGTTTCAGCTCTGCAGTTCCTCACCAGCTCTCCACGTGGGTGCATAGGCGCGCCGAAAGCCCAAGCAACATCGCAGTGGAGACGAAGTATCAAGGCGCCCAGTTGTACGCGTGCAGTCACAACCAAGAACAAAGAATCCGCAGCGGAAGCGGGCGTCTGGGTTTCAGCTCTGCAGTTCCTCACCAGCTCTCCACGTGGGTGCATAGGCGCGCCGAAAGCCCAAGCAACATCGCAGTGGAGACGAAGTATCAAGGCGCCCAGTTGTACGCGCGCAGTCACAACCAAGAACAAAGAATCCGCAGCGGAAGCGGGCGTCTGGGTTTCAGCTCTGCAGTTCCTCACCAGCTCTCCACGTGGGTGCATAGGCGCGCCGAAAGCCCAAGCAACATCGCAGTGGAGACGAAGTATCAAGGCGCCCAGTTGTACGCGCGCAGTCACAACCAAGAACAAAGAATCCGCAGCGGAAGCGGGCGTCTGGGTTTCAGCTCTGCAGTTCCTCACCAGCTCTCCACGTGGGTGCATAGGCGCGCCGAAAGCCCAAGCAACATCGCAGTGGAGACGAAGTATCAAGGCGCCCAGTTGTACGCGTGCAGTCACAACCAAGAACAAAGAATCCGCAGCGGAAGCGGGCGTCTGGGTTTCAGCTCTGCAGTTCCTCACCAGCTCTCCACGTGGGTGCATAGGCGCGCCGAAAGCCCAAGCAACATCGCAGTGGAGACGAAGTATCAAGGCGCCCAGTTGTACGCGCGCAGTCACAACCAAGAACAAAGAATCCGCAGCGGAAGCGGGCGTCTGGGTTTCAGCTCTGCAGTTCCTCACCAGCTCTCCACGTGGGTGCATAGGCGCGCCGAAAGCCCAAGCAACATCGCAGTGGAGACGAAGTATCAAGGCGCCCAGTTGTACGCGTGCAGTCACAACCAAGAACAAAGAATCCGCAGCGGAAGCGGGCGTCTGGGTTTCAGCTCTGCAGTTCCTTACCAGCTCTCCACGTGGGTGCATAGGCGCGCCGAAAGCCCAAGCAACATCGCAGTGGAGACGAAGTATCAAGGCGCCCAGTTGTACGCGCGCAGTCACAACCAAGAACAAAGAATCCGCAGCGGAAGCGGGCGTCTGGGTTTCAGCTCTGCAGTTCCTCACCAGCTCTCCACGTGGGTGCATAGGCGCGCCGAAAGCCCAAGCAACATCGCAGTGGAGACGAAGTATCAAGGCGCCCAGTTGTACGCGCGCAGTCACAACCAAGAACAAAGAATCCGCAGCGGAAGCGGGCGTCTGGGTTTCAGCTCTGCAGTTCCTCACCAGCTCTCCACGTGGGTGCATAGGCGCGCCGAAAGCCCAAGCAACATCGCAGTGGAGACGAAGTATCAAGGCGCCCAGTTGTACGCGTGCAGTCACAACCAAGAACAAAGAATCCGCAGCGGAAGCGGGCGTCTGGGTTTCAGCTCTGCAGTTCCTCACCAGCTCTCCACGTGGGTGCATAGGCGCGCCGAAAGCCCAAGCAACATCGCAGTGGAGACGAAGTATCAAGGCGCCCAGTTGTACGCGCGCAGTCACAACCAAGAACAAAGAATCCGCAGCGGAAGCGGGCGTCTGGGTTTCAGCTCTGCAGTTCCTCACCAGCTCTCCACGTGGGTGCATAGGCGCGCCGAAAGCCCAAGCAACATCGCAGTGGAGACGAAGTATCAAGGCGCCCAGTTGTACGCGCGCAGTCACAACCAAGAACAAAGAATCCGCAGCGGAAGCGGGCGTCTGGGTTTCAGCTCTGCAGTTCCTCACCAGCTCTCCACGTGGGTGCATAGGCGCGCCGAAAGCCCAAGCAACATCGCAGTGGAGACGGAGTATCAAGGCGCCCAGTTGTACGCGCGCAGTCACAACCAAGAACAAAGAATCCGCAGCGGAAGCGGGCGTCTGGGTTCCAGCTCTGCAGTTCCTCACCAGCTCTCCACGTGGGTGCATAGGCGCGCCGAAAGCCCAAGCAACATCGCAGTGGAGACGAAGTATCAAGGCGCCCAGTTGTACGCGTGCAGTCACAACCAAGAACAAAGAATCCGCAGCGGAAGCGGGCGTCTGGGTTTCAGCTCTGCAGTTCCTCACCAGCTCTCCACGTGGGTGCATAGGCGCGCCGAAAGCCCAAGCAACATCGCAGTGGAGACGAAGTATCAAGGCGCCCAGTTGTACGCGTGCAGTCACAACCAAGAACAAAGAATCCGCAGCGGAAGCGGGCGTCTGGGTTTCAGCTCTGCAGTTCCTCACCAGCTCTCCACGTGGGTGCATAGGCGCGCCGAAAGCCCAAGCAACATCGCAGTGGAGACGAAGTATCAAGGCGCCCAGTTGTACGCGCGCAGTCACAACCAAGAACAAAGAATCCGCAGCGGAAGCGGGCGTCTGGGTTCCAGCTCTGCAGTTCCTCACCAGCTCTCCACGTGGGTGCATTGGCGCGCCGAAAGCCCAAGCAACATCGGAGTGGAGACGAAGTATCAAGGCGCCCAGTTGTACGCGCGCAGTCTCTACCAAGAGCAAGGAATCCGCAGCGGAAACCGGTGAGTCATAG
Protein Sequence
MNHPSGVWVSALQFLTSSPRGCIGAPKAQATSQWRRSIKAPSCTRAVTTKNKESAAEAGVWVSALQFLTSSPRGCIGAPKAQATSQWRRSIKAPSCTRAVTTKNKESAAEAGVWVSALQFLTSSPRGCIGAPKAQATSQWRRSIKAPSCTRAVTTKNKESAAEAGVWVSALQFLTSSPRGCIGAPKAQATSQWRRSIKAPSCTRAVTTKNKESAAEAGVWVSALQFLTSSPRGCIGAPKAQATSQWRRSIKAPSCTRAVTTKNKESAAEAGVWVSALQFLTSSPRGCIGAPKAQATSQWRRSIKAPSCTRAVTTKNKESAAEAGVWVSALQFLTSSPRGCIGAPKAQATSQWRRSIKAPSCTRAVTTKNKESAAEAGVWVSALQFLTSSPRGCIGAPKAQATSQWRRSIKAPSCTRAVTTKNKESAAEAGVWVSALQFLTSSPRGCIGAPKAQATSQWRRSIKAPSCTRAVTTKNKESAAEAGVWVSALQFLTSSPRGCIGAPKAQATSQWRRSIKAPSCTRAVTTKNKESAAEAGVWVSALQFLTSSPRGCIGAPKAQATSQWRRSIKAPSCTRAVTTKNKESAAEAGVWVSALQFLTSSPRGCIGAPKAQATSQWRRSIKAPSCTRAVTTKNKESAAEAGVWVSALQFLTSSPRGCIGAPKAQATSQWRRSIKAPSCTRAVTTKNKESAAEAGVWVSALQFLTSSPRGCIGAPKAQATSQWRRSIKAPSCTRAVTTKNKESAAEAGVWVSALQFLTSSPRGCIGAPKAQATSQWRRSIKAPSCTRAVTTKNKESAAEAGVWVSALQFLTSSPRGCIGAPKAQATSQWRRSIKAPSCTRAVTTKNKESAAEAGVWVPALQFLTSSPRGCIGAPKAQATSQWRRSIKAPSCTRAVTTKNKESAAEAGVWVSALQFLTSSPRGCIGAPKAQATSQWRRSIKAPSCTRAVTTKNKESAAEAGVWVSALQFLTSSPRGCIGAPKAQATSQWRRSIKAPSCTRAVTTKNKESAAEAGVWVPALQFLTSSPRGCIGAPKAQATSEWRRSIKAPSCTRAVSTKSKESAAETGES

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-