Ehay001083.1
Basic Information
- Insect
- Eretmocerus hayati
- Gene Symbol
- -
- Assembly
- GCA_029851415.1
- Location
- CM056741.1:17348230-17350872[-]
Transcription Factor Domain
- TF Family
- zf-GAGA
- Domain
- zf-GAGA domain
- PFAM
- PF09237
- TF Group
- Zinc-Coordinating Group
- Description
- Members of this family bind to a 5'-GAGAG-3' DNA consensus binding site, and contain a Cys2-His2 zinc finger core as well as an N-terminal extension containing two highly basic regions. The zinc finger core binds in the DNA major groove and recognises the first three GAG bases of the consensus in a manner similar to that seen in other classical zinc finger-DNA complexes. The second basic region forms a helix that interacts in the major groove recognising the last G of the consensus, while the first basic region wraps around the DNA in the minor groove and recognises the A in the fourth position of the consensus sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 17 0.11 1.8e+03 0.9 0.0 26 45 10 29 7 35 0.87 2 17 0.03 4.6e+02 2.7 0.1 18 45 29 56 21 60 0.87 3 17 0.0016 24 6.8 0.3 13 52 81 120 78 121 0.90 4 17 0.057 8.8e+02 1.9 0.0 23 43 119 139 115 143 0.90 5 17 0.0087 1.3e+02 4.5 0.0 26 46 206 226 199 229 0.81 6 17 0.078 1.2e+03 1.4 1.0 21 44 285 312 282 317 0.59 7 17 2.2e-06 0.034 16.0 0.2 5 47 325 368 322 372 0.81 8 17 0.068 1e+03 1.6 0.1 23 45 371 393 368 399 0.84 9 17 0.00026 3.9 9.4 0.1 19 46 424 451 418 458 0.90 10 17 0.34 5.3e+03 -0.6 0.0 24 48 457 480 452 486 0.86 11 17 0.96 1.5e+04 -2.1 0.1 26 44 487 505 479 515 0.86 12 17 0.33 5.1e+03 -0.6 0.0 21 46 510 535 496 541 0.79 13 17 0.24 3.7e+03 -0.1 0.0 21 46 568 593 560 598 0.83 14 17 0.0049 75 5.3 0.0 21 44 680 703 670 709 0.90 15 17 0.027 4.1e+02 2.9 0.1 21 49 739 767 736 770 0.92 16 17 0.029 4.4e+02 2.8 0.1 27 47 801 821 795 848 0.85 17 17 1 1.6e+04 -2.1 0.0 27 49 856 878 852 880 0.74
Sequence Information
- Coding Sequence
- ATGCATACAGTAATTGACAAACTCTTCTCATGCACGATTTGCGATGCTAAACTCAAGAACGAAGCCTCGATGAGTCGCCATATGAAGTCCCATGACAGAAAACCAATACCTTGCAACGTTTGCAATCAGACATTCAAAACCGAGAGATCCTTATTTTCCCATCTGAAAGAGCATTACAAGGGTGGTGAGCTGTTGTCATGCAAGgtctgtggaaaatttttcgaggtcAAAGAAGAGTTTGAGAAACATAAGGAGATGCACCAAAGTGGACGAAGTCACGAATGTGAAACTTGCGGGAAATCCTTCAGACAGAAATCGCTGCTGCGCAAACACATGCGTGTACATGAAAATGTGAAACCTTTCAAGTGTGACGTGTGCGGCAAGGATTTTCGTACAAGAGGAAACTTGAAAAGGCATTCAATGTGGCACACAAGAGAAGGACTTCTATCATGCAAGCTCTGTGGTAAAGGTTTCCCTCATAAAGACAATTTGACAAGACATATGAGAACACACACTGGAGAAAAGCTGTATTCATGCGACATCTGCGGTAAAAAATTTGGCTACAAGTACAGTTTGATGTTGCATTCAAAATTGCACACAGGTGAAAAGCTCCATCCATGTACGATTTGCGATAAGAGCTTTCTTGCCCAGTCAAATCTACGAAAACATATGGAAGTACACGAAAGAGGCAATTATCTACCCTGCACTGagtgtgatgaaaaatttgctcaCAAGAAAACTCTACTTGCTCACATGAAAACACACTTGCCTGAGAAATTTCCTTCGTGTAAAAACTGCGGTAAAATCTTCAAAGTGAAGCTTGCTCTCAAAACCCATGTATTAACTCGCGAGTGTGAGGAACCTTATCGTTGCGACATTTGTGGCCAGAGTTATGTACGCAAGATTCGGTTAGAAAGGCACATAATCCGTCACTCGGAAGTCCCTCAGATTTTTCATTGTGACATGTGTAAAAAAAGCTTCCATACCAAGGGTCAGATTGAAACACATTTACGTTCGCACACGACTGAGAAACCGTTTTCATGCAAAATCTGCGATgctaaattcaaaattgaatgctcCATGAGACGTCATTTAGAATTACACGCCACAGAGCCTATATCATGCAAGGTTTGCCATGAGACTTTTAAGAGTAAAAGATCATTGTTCACTCATATGAGAGAACACTTTAAAGGTGGAAAACTGTTATCATGTGAGGTCTGTGGAAAGTTATTCGAGTTTGAAGATGAATTGAAGGAGCATAAAAAGGACCACCAAAGTGAGCGGAATCATCAGTGTAATACTTGCGGTAAGGTCTTTGGTCAGAAAAAAACACTACGCAATCATCTGCGTGTGCACGAAAATTTGATGCCATTCAAGTGCGAAGTTTGTGACAAAAACTTTCGCACCAAGGGAAATTTGAAATTGCATTCAATGCGGCATACAGGAGATGGACTagtttcatgtaaaatttgtaATAGAAGTTTTACCCATAAGAGCAATTTGACACACCATATGAGGTCACACACTGGTGAAAAGCGTTACTCTTGTGAAATCTGCGACAAGAGTTTCGTGGATAAATATAATCTATCAAAACATTATGCGATTCATCAAACCAAGAAATCTCAGGCCTTCAAGTGTAAGTTTTGTGACAAAATATTCATAGCTCCAGTCGATCTGAAACAGCATGAACAAACGCACACAGGTGAAAGACCCTTTCTGTGTCACATCTGTGGCAAGGACTTTCGATTTCGAAAGGGTCTGACGGTTCACATGAAAATACATCGAAGAGACAAGTTCTTCCCGTGCAATATTTGTGACAAAAAGTTCATCGCACAAGAAACTTTAGATGCGCACATGGCTGCGCATGCGGGTAAAAGACTATTCCCGTGTATAGAGTGTGAAAAGGGCTATAATAACAAGTTCGCTCTCAAAAACCATATGCTGACTCACGAGGGTAAAGAGCCCTTCTGCTGTGACTATTGTAAGAAGCGTTTTGTATCCAAAAAAGGTCTTGAAATTCACATTAGGATTCATACTGGAGAAAAGCCTTTTGCATGTAAAATCTGCGATAGCCGCTTCACCCAGGGCAGTGGTTTGAGAACACACATGAGGCAGCACCAGAATCCAGACGAAAAGGCCTATGTACCGTGCAAAGTGTGCGGAAAGCGTCTGGGTAACAAAGACTCATTGAAAATGCACATGACAATACATACGGGTGAGAAACCTTTCCAATGTGcagattgtggaaaaaccttTAGGCGGAGAAGTGATCTTGTTGCTCACTTGCGGTTGATGCACATGAATGAGAGACtattctcttgcaaaatttgtggCTCAAGTTTTGCGCGTAAGTCGAGTCTCACGCAACACATGGTGATACACAATAAAACTTGCTTCAAATGCGCTGACTGTGGAAAGAAATTGCCTCGTGAGAGATCCTTGAAACGTCATATGGAATTACATGAACGCTACAAATCTACAACTTGCAAAGTCTGTGGACGAGCTTTTCCAGGCAAAGATCATCTGGACAAACATGTTAAACTGCACGATGGTCAGATTTTCCCATGCAACTATTGCGACAAGATGTTTTTCACAACGGGAGGGTTAAATCGGCATTTGAAGAAGAAACATGGAGGCAAGTGA
- Protein Sequence
- MHTVIDKLFSCTICDAKLKNEASMSRHMKSHDRKPIPCNVCNQTFKTERSLFSHLKEHYKGGELLSCKVCGKFFEVKEEFEKHKEMHQSGRSHECETCGKSFRQKSLLRKHMRVHENVKPFKCDVCGKDFRTRGNLKRHSMWHTREGLLSCKLCGKGFPHKDNLTRHMRTHTGEKLYSCDICGKKFGYKYSLMLHSKLHTGEKLHPCTICDKSFLAQSNLRKHMEVHERGNYLPCTECDEKFAHKKTLLAHMKTHLPEKFPSCKNCGKIFKVKLALKTHVLTRECEEPYRCDICGQSYVRKIRLERHIIRHSEVPQIFHCDMCKKSFHTKGQIETHLRSHTTEKPFSCKICDAKFKIECSMRRHLELHATEPISCKVCHETFKSKRSLFTHMREHFKGGKLLSCEVCGKLFEFEDELKEHKKDHQSERNHQCNTCGKVFGQKKTLRNHLRVHENLMPFKCEVCDKNFRTKGNLKLHSMRHTGDGLVSCKICNRSFTHKSNLTHHMRSHTGEKRYSCEICDKSFVDKYNLSKHYAIHQTKKSQAFKCKFCDKIFIAPVDLKQHEQTHTGERPFLCHICGKDFRFRKGLTVHMKIHRRDKFFPCNICDKKFIAQETLDAHMAAHAGKRLFPCIECEKGYNNKFALKNHMLTHEGKEPFCCDYCKKRFVSKKGLEIHIRIHTGEKPFACKICDSRFTQGSGLRTHMRQHQNPDEKAYVPCKVCGKRLGNKDSLKMHMTIHTGEKPFQCADCGKTFRRRSDLVAHLRLMHMNERLFSCKICGSSFARKSSLTQHMVIHNKTCFKCADCGKKLPRERSLKRHMELHERYKSTTCKVCGRAFPGKDHLDKHVKLHDGQIFPCNYCDKMFFTTGGLNRHLKKKHGGK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00668951;
- 90% Identity
- iTF_00668951;
- 80% Identity
- iTF_00668951;