Ehay028531.1
Basic Information
- Insect
- Eretmocerus hayati
- Gene Symbol
- -
- Assembly
- GCA_029851415.1
- Location
- CM056742.1:139124213-139171220[+]
Transcription Factor Domain
- TF Family
- MBD
- Domain
- MBD domain
- PFAM
- PF01429
- TF Group
- Unclassified Structure
- Description
- The Methyl-CpG binding domain (MBD) binds to DNA that contains one or more symmetrically methylated CpGs [2]. DNA methylation in animals is associated with alterations in chromatin structure and silencing of gene expression. MBD has negligible non-specific affinity for DNA. In vitro foot-printing with MeCP2 showed the MBD can protect a 12 nucleotide region surrounding a methyl CpG pair [2]. MBDs are found in several Methyl-CpG binding proteins and also DNA demethylase [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 5 0.12 1.4e+03 0.7 0.1 16 29 352 365 350 378 0.81 2 5 1.6e-05 0.2 13.0 0.1 8 38 386 413 378 427 0.84 3 5 0.0011 13 7.2 0.1 42 71 433 462 431 465 0.89 4 5 1.1e-06 0.013 16.8 0.0 8 41 1020 1050 1014 1065 0.84 5 5 6e-08 0.00074 20.8 0.0 42 74 1088 1120 1085 1123 0.93
Sequence Information
- Coding Sequence
- atgaaactGTCGATAGTATTTTGCTGTCTAGTTTTAGCAATTGTAGCTGTAAAATGCAGCCCATTACCAGAACAAAAAGCCACAGATGATCTTAGCCCTCTTAACGAAaacgacgacgacgatgaaagAGGCGATAGGGATAAGAGGAAAATTGGTGTTATTAAGTTAGGCATTACCAATGGCATTCTCAACTTTGTTTTCGGGaaaCTGGATGCCTTCTTAGACGCTAAAACAAAATCGCTCGTTATACTGGACGAAAGTAACAAAGCCAAAAATGCTGCATTCGATATCGATCCTAACCAATCAGCTACGGGCGAATTCATCACCAAGGTCCTTGGGCAAAAGGCGAAAGCAGCATCAAATAGTATTGGACCACTTGTGAATGCCGGTTCGACCTTCTTAAGTACAGCCAAGCAGGGCATTGCCGGTGCATTTATATCGAAATTTGCGCCTCTCAGCTCATTGTCAAGTGGATTGGCTGGTGGTCTTTCTGGTGGCTCCAACAGTGGAGCTGGAGGTGAAGATGGAAACGGTGATGGTGGAAACGGAGGTGGCTCCGGAGGTAGCAACAGTGGAAGTTTCCTATCTGGTCTTATAGGCAGTTTGAGCAGTGGTAGCGGTGGTCTAAGCGGTGGTCTTAGCGGTGGAAGCAGTGGTGGCCAAGGAGCAAGTGCCAGTGACAATGACGACGACAACGGTGTAGCATTCGAGCTTGATCCGATACCCGACTCAGATTTTCCTACCGCGACAACGTCAGATTCAAAATCCAGCACGGGCTTCGCCAATCTTGGCGTTGCAAACGGGAAGAAAAAACGAGCAACGACTGCACGAACTACAACAACGACCGAGGATATTGTTATATTCAACAGGGACAAAGTGTCTTTAGACATACCATCACAAGCAAGTAAGGGCCGTTCACGAAAGCCACCACGGAAACGCCGAAAAATAGGCCACCGTGAAGAgaagattgaaagaaaaaactTGATCGCGCTTGATAATGAAGTAGGAGATAACTCTGTCAAAATCAGCAGTACAGAACAGCTCCGAGAAACTAGAAGAACATTCAGAATAAGGAAAAATGGAACGAGTTATTATGAAGGAAGTCGCGTTCGTCTTAAGAATCAAACTCATATCGATAGAGAGAACCCCATTTATCATGCTCCATTCAATTTTGGTTGGAAACGAGAGGTAGTCCATCGTTTGAATGGGAAATTTATTGATGTATACTACTATCCTCCCAAGATTGAAGAAGATAAAAAGGAAAGTAAAAAACAAACCATGCACAAAATGGTATCAAAACTGAGGAGTTACACAGAAATAGCAAAgtatcTGGAAGTTTTCTACAAAAATCGAGCATTGACGATAGATAATTTCACATTCGTCAAGGAATCTCTTGGTTTCAATGATCCTGAGAAAGATGTGGTTCGTTGTGCGAAAGACATGTTTGCGAAAGAAAAATCAAAGGAAACCACTTTTGATCAAGTACCTCTGATAGAAACACGGAAACGGTCGGAAGTGCCGCAGATAGAAAAAATGTTGGATGGGAAATCAAAACTGAATGGTCTAACTGAAAAATGTCCCAACAAGCTGGTAACGTCGAAAATCAAGTATTGTCCGAATGACAAGGTCCCAGAAACCTCAAGTTTTGTACCTCCAGAAGAGAACAGATCACCTCAAGTGTCCACCTCGACCGAACAAATGCCCTTCACATCTCAGAAAGATCTTAATGTTACGGATAGTCGAAAAAAAAGTGCAGAAACTCCACTGCTAAGTTCATCAAAGTCATCCATTGGTTTTAATAAAATCCTCGATATTTTGCTAACCAGACAACTTCGTGCACGAGTTCATCAGCCCCTTTACGATGAGGATTTGATCATGAGGAAACTTCGATACGTGCCTGTAACCAAAGTCTCTCGACGAAAATCACGTGCTGGAGGTCTCAATGGCATCAAGCGTCAAGCCAAGAGTTCTCCGATCACTCCTATCCTATGCGTGGTTTCATCGAGTGTACAAGATGCCTCGCTCAATATTCCTTTATCATCTACGGCATCGGAGAGTTGTCAAGTGAATCCTGCATTCCTCGACGTTGATCCATTGGCTTTACCAGAACCGAAATCAAATTTGCGATCGGAAACGAGTCCGACGAGGGAATCTCAACTTGATGAACAAATGGCTGAATCTCATGATCAGATTAGCTCAACATTTGATTCAATTAGCAGGGAAATGAGTACTTCTAATGAAGGATTCAAGATCGAGCCCGAAGTTTATGTCGTTGGACCCAACAGTAATATTCTCGATGGTAGAGATTTTGTTTGCATCAGTGACGATTGCTCGGGGGAAATATTTCAATTGAAAGTCTTCATGAGAGAAGTGAACTCTTTGAATGATGAGGTGGAGATTCGACGATTTAGCATCGAATTTGATGCTGCTCCTATCTATACTCGTCTCTGTATGACGCTTGAGAATATTTTCCCCAATCTCAAAAATAGATCTTTCACGCTGGAATGGGAAGATTCTGAAGGAGATAGAGTTTCAATTTCGAGTTCCGTAGAACTCAGAGAAGCTATAGAATCAATGAGAAATTGTAAGGTGATGAAATTTTACTTAACAGCTGGTGGCTGCGATACGCTGTCGAGCTCGATTACTAGGGCAAAGAATATTTCATTAAAACCTTACGATGTGAGATTTGCAAGAATGGAGGAGATCGAGATTCAAATCCagaagaatattgaaaaggGACATTTTCTTGATTATGAACATGCCGATACGGAGTCAGAATTCAGATCTCAACAAAAATGCCGCAGTGTACCTTTGAGAAAACGAAGTACAGATACCGCTCCTCTGGCAAATGGAGGACAGACTGATTTTGTCTACTCTGATGATGGAATCAAGGGCAAGGGAAACAAGTCAGAGGAAACATTCTCTCCTGAACGAAAAAGATCCAAAAGACCTCGTGGTTCGTCTGATtcagaaaagtcaaaaaagggtctCGACAGTGATCGCAGGTTAAGTCGTTCTAACAATCGCGAATCACTTGATGTAACGAATCCTTTGTACCATTTACCATTCGCTTATGGGTGGAGACGAGAGCTAGTTAATCGTGTTGATGGTCGTCACTCGGATGTCTATTATTACCCTCCTAAGCATGAAAATACAGATACCAAGAAATCTCAAGAATCACTTGCAACTAACgaagttggaaaaaaaaataaggaTAAAGATAAGAAAACATTTCCAAGAAATCAATACAAGACCTGTCCCAAACTGAGAAGCTACGTTGAAATAGCCAAGTATTTACAATCTCACCCCGAATATTCGAATTTGAAGGTGGAAAACTTTACATTCACCAAGCAATTATTGTTGGGTCATGTCAATTCTGATAGAGAATGTGTTCGTCAGGCAGTCCCCAACTGGGACAGAGgacgaaaaaaagaagaaaaattgaaaGGCTCGCAAAAATCATCACGAAAATCTGACTCAAACGATCAGATTCCTGTTGGATCAATGCTGAACGCAGGAGATCAATCGCTCTTATTTCAGAATTCATTTGTCACTACAGAAGAAGCTCTTCAAAGTGGATATTCGGGAGACGATAGATTCACAATAGAGGTTGATCCTCATGCCATCGGGAATCCAACAGTCCTAAGTTCCATACCTTCATCGGAGATCCAATCACGGGAGGCATCTACCTCGTCAGAGCAAAAGGAAAATCAAGATAACGTCTTTCAAACTTTATCACCTAAGCTATCAGATTCATCCATTGCCAAGAACCGCAAGCGACACAAAGAATCTCCAGCAAATGGCCGTTTAAGCACGTCTCACACGGTAGTATCAGACGCTTCATCAACCACGATTTTTCCAACAAGTGAGACATCGCAAAATATTGATAGGGTTATTCAGCATGTCTCGTCGGTTGACTTCAATCCATTGAATTCGTCTCATGTTCAACCAAACATCCCCGCACAAGAAGTTTCAGCACAAGAATTTCAATCTGATAAGTCTTCGGTTGAAGAACAGACACCCGTTAATCAGAACCAAATTAGTTCAACATTAGATTCAATGAGCAAAAATTTGAACACCGAACCCGAGGAAATCAAAACTGAGCCAGAGATCTGTATTGTTGAACCGGAACTGCAACCCAAGATTGAAAATATGGAAACGACAGAGTTCGGAAACGTCAATCAGAGATGCACACCAGAGATCTACCAATTCAAGGTCTttatgaaagaagaaaatgctCCAGATGACAAAGTCGAAATTCGGAGGTTTAGCACTAGTTTTGATGCCACTCCCATGTACACTCATCTTTGCAATATGCTACTGACTGTTTTCCCGAACCTCAAGAACGCATCTTTCACACTCGAGTGGAAAGGGATCCACAGTAGACCCAAACATTTCACCGCAGCGCCACCACCTAACCGGTCGGAAAACCCCAAAGCTCCTCTCACAAGTATGAAATCGGTTATGCAGCCTATTCAACGTCATCAGGATTCAAATACCGGAGGTCCGGCTTGCCAACTGGAATAA
- Protein Sequence
- MKLSIVFCCLVLAIVAVKCSPLPEQKATDDLSPLNENDDDDERGDRDKRKIGVIKLGITNGILNFVFGKLDAFLDAKTKSLVILDESNKAKNAAFDIDPNQSATGEFITKVLGQKAKAASNSIGPLVNAGSTFLSTAKQGIAGAFISKFAPLSSLSSGLAGGLSGGSNSGAGGEDGNGDGGNGGGSGGSNSGSFLSGLIGSLSSGSGGLSGGLSGGSSGGQGASASDNDDDNGVAFELDPIPDSDFPTATTSDSKSSTGFANLGVANGKKKRATTARTTTTTEDIVIFNRDKVSLDIPSQASKGRSRKPPRKRRKIGHREEKIERKNLIALDNEVGDNSVKISSTEQLRETRRTFRIRKNGTSYYEGSRVRLKNQTHIDRENPIYHAPFNFGWKREVVHRLNGKFIDVYYYPPKIEEDKKESKKQTMHKMVSKLRSYTEIAKYLEVFYKNRALTIDNFTFVKESLGFNDPEKDVVRCAKDMFAKEKSKETTFDQVPLIETRKRSEVPQIEKMLDGKSKLNGLTEKCPNKLVTSKIKYCPNDKVPETSSFVPPEENRSPQVSTSTEQMPFTSQKDLNVTDSRKKSAETPLLSSSKSSIGFNKILDILLTRQLRARVHQPLYDEDLIMRKLRYVPVTKVSRRKSRAGGLNGIKRQAKSSPITPILCVVSSSVQDASLNIPLSSTASESCQVNPAFLDVDPLALPEPKSNLRSETSPTRESQLDEQMAESHDQISSTFDSISREMSTSNEGFKIEPEVYVVGPNSNILDGRDFVCISDDCSGEIFQLKVFMREVNSLNDEVEIRRFSIEFDAAPIYTRLCMTLENIFPNLKNRSFTLEWEDSEGDRVSISSSVELREAIESMRNCKVMKFYLTAGGCDTLSSSITRAKNISLKPYDVRFARMEEIEIQIQKNIEKGHFLDYEHADTESEFRSQQKCRSVPLRKRSTDTAPLANGGQTDFVYSDDGIKGKGNKSEETFSPERKRSKRPRGSSDSEKSKKGLDSDRRLSRSNNRESLDVTNPLYHLPFAYGWRRELVNRVDGRHSDVYYYPPKHENTDTKKSQESLATNEVGKKNKDKDKKTFPRNQYKTCPKLRSYVEIAKYLQSHPEYSNLKVENFTFTKQLLLGHVNSDRECVRQAVPNWDRGRKKEEKLKGSQKSSRKSDSNDQIPVGSMLNAGDQSLLFQNSFVTTEEALQSGYSGDDRFTIEVDPHAIGNPTVLSSIPSSEIQSREASTSSEQKENQDNVFQTLSPKLSDSSIAKNRKRHKESPANGRLSTSHTVVSDASSTTIFPTSETSQNIDRVIQHVSSVDFNPLNSSHVQPNIPAQEVSAQEFQSDKSSVEEQTPVNQNQISSTLDSMSKNLNTEPEEIKTEPEICIVEPELQPKIENMETTEFGNVNQRCTPEIYQFKVFMKEENAPDDKVEIRRFSTSFDATPMYTHLCNMLLTVFPNLKNASFTLEWKGIHSRPKHFTAAPPPNRSENPKAPLTSMKSVMQPIQRHQDSNTGGPACQLE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -