Basic Information

Gene Symbol
-
Assembly
GCA_029851415.1
Location
CM056743.1:45801883-45807898[+]

Transcription Factor Domain

TF Family
RHD
Domain
RHD domain
PFAM
PF00554
TF Group
Beta-Scaffold Factors
Description
Proteins containing the Rel homology domain (RHD) are eukaryotic transcription factors. The RHD is composed of two structural domains. This is the N-terminal DNA-binding domain that is similar to that found in P53. The C-terminal domain has an immunoglobulin-like fold (See PF16179) that functions as a dimerisation domain [1-2].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 3.3e-35 1.8e-31 111.1 0.0 1 169 13 183 13 183 0.95

Sequence Information

Coding Sequence
ATGAACCGGGTTTACAATCATGACATCAAACCTTTTGTAAAGATCAAAGAACAGCCAAAAGGTTCGGTTCGCTTTCGGTACGCGAGTGAAGGGCGGTATGAGTgtatttttggagaaaattctaGCAAACGAAACAATACTTCTCCCACCATACAGaTCGTGAACTCAGACAGAGCCGCATTTATACTTGTATCATGCGTGGCTGAAGATTTCCCGTATTACGCTCATCCCTACGGATTGGAGAGCGAGCTCCCTGGATCAATTTTGGAAAACGGAGTGTACTGTTGCGAGTGCTCGGCTGGGAGGTCAGAAATCCAATTCCCAAGTCTCAGAATTGGATGCGTAAAAGTTAAGGATATGTTCCAAGTGTTAACTCAGCGTGAAAAAAGACGGATCGACCCATTTAATGCTGGATTTCTCCACAAATATCGCCCTGGGAACATCAATAGACAAAGTTTACGGCTCTGTTTTCAAGTGATCTTAAAAGACGATGATGGAAACTATAGCATACCACTTGATCCTGTCGTTACCAAGCCAATTCACAATAAAAAAAAGACGAGTGATCTGAAAATCATTTACATAAGTCATTATTCAAGTGTCGTGACTGGTGGCGAACTCATTTGTGTTTTATGCGAGGGAATAGTGGACAACAAGATAGGAGTGAAATTCTTCGATGAAAACCATGGATGGGAAGCAGTACCagatccgcaaaaatttttcattcacaaaaagGCAGCCTTGGTATTTCCAACTCCACCGTATACATTAGACATAGATGAACCAGCAGAAGTACAAATTCAGCTAACGCGACTTTCGGATGAGGAAGTTAGCCAGGTGATACATTTCACCATGTTACCATTGGAAACAGGCGATCCCAGTCTACGAAAAAGAAAGCGACGAAGATTGAATGAAACTCCCCGGGAATTAATCGAGAGGAATCAAACCAAAGAAGTCCTAACAGGTAAAGTTACGCCATTAATACAATGTTCCGCGGCTGTGAGAGATAATAAAAATCTGATTCCTGTTGGGATCGACTTAGATAATAACTCATATATTCTACTCCCAGGATTAACGCACGTTGAAAACGGCCCTTTATCAGAGCAATTGAGGAGTAAAATACCGCCCGAAGCACCTCTAATTCCATCAACAATTAACTGGAATTTTTCCAGCGAAGCATCTAATCTGTTGGATGAGTCGTTATTCGACACTCCTTCTCATCATGATGCTCTATTGCAAGTACAAGGTGTTGAAGATGTGAATCAGGATAATGTTCAAAACGATTATGATTACGCTCAAGCACAATTATGTTCGGAACCGATCCTTCGTATGCCTCCGACTCAAGGACACTTTTTCACTGATGGCTAA
Protein Sequence
MNRVYNHDIKPFVKIKEQPKGSVRFRYASEGRYECIFGENSSKRNNTSPTIQIVNSDRAAFILVSCVAEDFPYYAHPYGLESELPGSILENGVYCCECSAGRSEIQFPSLRIGCVKVKDMFQVLTQREKRRIDPFNAGFLHKYRPGNINRQSLRLCFQVILKDDDGNYSIPLDPVVTKPIHNKKKTSDLKIIYISHYSSVVTGGELICVLCEGIVDNKIGVKFFDENHGWEAVPDPQKFFIHKKAALVFPTPPYTLDIDEPAEVQIQLTRLSDEEVSQVIHFTMLPLETGDPSLRKRKRRRLNETPRELIERNQTKEVLTGKVTPLIQCSAAVRDNKNLIPVGIDLDNNSYILLPGLTHVENGPLSEQLRSKIPPEAPLIPSTINWNFSSEASNLLDESLFDTPSHHDALLQVQGVEDVNQDNVQNDYDYAQAQLCSEPILRMPPTQGHFFTDG

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-