Basic Information

Insect: Eremobia ochroleuca
Gene Symbol: -
Assembly: GCA_949629135.1
Location: OX451400.1:14868125-14871634[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 7e-05 0.0069 17.8 7.4 1 23 260 282 260 282 0.98

2 11 0.00034 0.033 15.6 0.5 1 23 288 311 288 311 0.95

3 11 0.00051 0.05 15.1 0.7 1 23 321 343 321 343 0.98

4 11 0.0098 0.96 11.1 3.9 1 23 350 372 350 372 0.97

5 11 6.2 6.1e+02 2.2 5.7 1 23 378 400 378 400 0.96

6 11 6.8e-05 0.0067 17.8 0.3 1 23 406 429 406 429 0.95

7 11 0.0052 0.51 11.9 1.6 2 23 435 454 434 454 0.96

8 11 8.7e-07 8.5e-05 23.8 1.0 1 23 460 482 460 482 0.97

9 11 2.7e-05 0.0027 19.1 2.5 1 23 488 510 488 510 0.98

10 11 5.6e-05 0.0055 18.1 0.9 1 23 516 539 516 539 0.97

11 11 0.39 38 6.0 0.3 1 21 545 565 545 566 0.93

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	7e-05	0.0069	17.8	7.4	1	23	260	282	260	282	0.98
2	11	0.00034	0.033	15.6	0.5	1	23	288	311	288	311	0.95
3	11	0.00051	0.05	15.1	0.7	1	23	321	343	321	343	0.98
4	11	0.0098	0.96	11.1	3.9	1	23	350	372	350	372	0.97
5	11	6.2	6.1e+02	2.2	5.7	1	23	378	400	378	400	0.96
6	11	6.8e-05	0.0067	17.8	0.3	1	23	406	429	406	429	0.95
7	11	0.0052	0.51	11.9	1.6	2	23	435	454	434	454	0.96
8	11	8.7e-07	8.5e-05	23.8	1.0	1	23	460	482	460	482	0.97
9	11	2.7e-05	0.0027	19.1	2.5	1	23	488	510	488	510	0.98
10	11	5.6e-05	0.0055	18.1	0.9	1	23	516	539	516	539	0.97
11	11	0.39	38	6.0	0.3	1	21	545	565	545	566	0.93

Sequence Information

Coding Sequence: ATGGCTAACGTAAAGAGTAGATTAAATGCACCCAAACGTGCATCTTCGAAGAAGAAAAAGACGggacataaaacaaaacaatcatCTACAGGTCCCAAGAAATCACCCTTGAAGAGAAATTATACAGAGAGCAATATAGTCATGAAACGACCATGCACCAGACCAGTCATGACACCAgatcaaaaaatcaaattctTATTGAAAAATGGGCATAAACTCAAGGAAAGATTTATTGCTAAACCACCTGTGAATGTTAAACCAATTCCAGAGGTAACTGTTGAGTCAAATCCTGAGCCGAGGGCTGAGCCACAAGGATGCTACAGCAAAACACAAGATACCAATCTGCCTCTTATGTCAAAAACTGGGcaccttaaaaaaaagaaacagtgCAATATGAAACTTGTTGATAGTATTCTGATGAATGAACTTATGATTGGTGGTGGGAAAACTGTACACACTGATGATGCGCCCCCCGTAGAGCCCGTAGAGGCACCTTCTCTGGCAGTGATACCTTTAAGAGTTGGTGTGGACAATAACAATGACATTCAAATAACAGACCAAAATAACACATCTCAAGATTACTCTGATGATGACGTGTGTAAATTATCTGATACTATCTCTACAACATCTGGTGACTCGACAGATGATGAAAACTGCTCAGATTCTGCAAATGAGAAATCTGGGAGTaaaacttcaaaaaagaaaaaaaaaaaaccctatcaGCAAAAACCAAGACATATCACACTGAAAAATGGTGTAGTATTAAAATTAGAGTACTTTGAGTGTGACCATTGCAACAGAACATTTAACAAGAAATGTTCCTTACGTAGACACATGTATGTACATCTCGGTATAAAGCCTTTTCGATGCCCTAATTGTCCTCAACAGTTCCGGAGCCTCTACAATGTGCAGGTTCATGTTGACCGTTACCATAAGACAAGTGAAGACGATCCAGAGCTTTTCATTTGCAATTTCTGTGAGAAACCATTTCTTGTTAAAGAAAACTTGAAGAAACATTTAGAAACTCACTCTGATAGTGGGAGTTCATTCAAATGCATTTACTGTAACAAAGTGTTCACATACCACATCATGTTGATGCAGCATGAGAAGAAACACATGGTGAAAGGACGCCATCAGTGCACTCTGTGCAGTATGTCTTATCGCTGTCGCAATCTCCTGTACTTGCATGTTAAAAGCCATTTAAAAATCAAAGATTTTGTCTGTCAATATTGTGGGAAAGAGTTTTTAAGACCGAATTCTCTGAAGCGGCACGTCGAGGTAAGCCACGGTGAACATAGAATTGTGTGTCCAATTTGCAAAAAGAAATTGAAGGGTCATCTGACTGAGCATATGCGCACGCATGAGAAAAAGCGTCCGCATGTGTGTCCTGAGTGTGGGCAACGGTTCACACAGTCCACTCAGCTGAACGTCCACCGCCGCGCGCACACCGGTGACAGGCCGTACCCTTGCCGCATATGCAAACGATTTTTTTCGCATTCCAACGCTCTCATGTTGCATATCAGACGCCACACAGGGGAGAAACCTTTCGCATGTGCTATGTGTCCAATGTCCTTCTCTCAACTGCCACACATGAAAACGCACATGCGTAAAATTCATGGTAAAGAGAACCCATACAAATGCGCTAACTGTGATTCCTTTTACAAGCTCAAAGCGCAGCTTGATGTGCATGAGAAGTCTTGCATAGGGGGAGCCACTGTTGATCAACCAGTCAAAGGTAAAAAGAAAAGGTCCAAGAAGGGGGAGGACGAGATAGAAGTGGAGTCGGCGATGTCATTGTCTCGCATGAGGTTCCTGTTGGCTCTACTCCTCACGATGATCGCTACCAAAGAAAAACTCAAATACCTAGGGTTCAACAAACGCCTCGTAGATGAGATTCTTGTCGAGTCGTTGGAGGCTATGGACAAGACTCCTTGCAAAGACGAGACTCTCACGCCGGCCAAGCGtctaaagaaaaatattgaaatgttcATAAGTGGAACAGTACCTAAGGCACAGCTGGCTACCTTCAAGAAAGAGAACAAGTCGACGGAAGACATTCTGGAACTATTGACTACTGAGAAAAATAAGTAA
Protein Sequence: MANVKSRLNAPKRASSKKKKTGHKTKQSSTGPKKSPLKRNYTESNIVMKRPCTRPVMTPDQKIKFLLKNGHKLKERFIAKPPVNVKPIPEVTVESNPEPRAEPQGCYSKTQDTNLPLMSKTGHLKKKKQCNMKLVDSILMNELMIGGGKTVHTDDAPPVEPVEAPSLAVIPLRVGVDNNNDIQITDQNNTSQDYSDDDVCKLSDTISTTSGDSTDDENCSDSANEKSGSKTSKKKKKKPYQQKPRHITLKNGVVLKLEYFECDHCNRTFNKKCSLRRHMYVHLGIKPFRCPNCPQQFRSLYNVQVHVDRYHKTSEDDPELFICNFCEKPFLVKENLKKHLETHSDSGSSFKCIYCNKVFTYHIMLMQHEKKHMVKGRHQCTLCSMSYRCRNLLYLHVKSHLKIKDFVCQYCGKEFLRPNSLKRHVEVSHGEHRIVCPICKKKLKGHLTEHMRTHEKKRPHVCPECGQRFTQSTQLNVHRRAHTGDRPYPCRICKRFFSHSNALMLHIRRHTGEKPFACAMCPMSFSQLPHMKTHMRKIHGKENPYKCANCDSFYKLKAQLDVHEKSCIGGATVDQPVKGKKKRSKKGEDEIEVESAMSLSRMRFLLALLLTMIATKEKLKYLGFNKRLVDEILVESLEAMDKTPCKDETLTPAKRLKKNIEMFISGTVPKAQLATFKKENKSTEDILELLTTEKNK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00173494;
90% Identity: iTF_00746093; iTF_01095213; iTF_01094319; iTF_00758521; iTF_01093406; iTF_00925118; iTF_00121724; iTF_00124546; iTF_00425738; iTF_00123634; iTF_00122695;
80% Identity: -