Basic Information

Insect: Eremobia ochroleuca
Gene Symbol: Znf296
Assembly: GCA_949629135.1
Location: OX451384.1:20222957-20236701[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 0.03 3 9.5 0.7 1 21 199 219 199 220 0.95

2 13 0.00052 0.051 15.1 0.6 2 20 233 251 232 255 0.95

3 13 0.072 7.1 8.3 0.8 2 23 295 316 294 316 0.95

4 13 0.57 56 5.5 0.2 2 23 393 415 392 415 0.90

5 13 0.012 1.1 10.8 0.3 1 20 420 439 420 441 0.92

6 13 4.3e-05 0.0042 18.5 0.8 1 23 449 472 449 472 0.98

7 13 3e-05 0.0029 19.0 2.2 1 23 493 515 493 515 0.98

8 13 7.1e-06 0.0007 20.9 3.8 1 23 522 544 522 544 0.99

9 13 1.5e-07 1.4e-05 26.2 2.3 3 23 558 578 556 578 0.96

10 13 3.4e-05 0.0033 18.8 3.2 1 23 584 606 584 606 0.99

11 13 3e-06 0.00029 22.1 2.6 2 23 613 634 612 634 0.96

12 13 1.7e-07 1.7e-05 26.0 1.4 1 23 640 662 640 662 0.99

13 13 0.0042 0.41 12.2 0.1 1 23 668 690 668 690 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	0.03	3	9.5	0.7	1	21	199	219	199	220	0.95
2	13	0.00052	0.051	15.1	0.6	2	20	233	251	232	255	0.95
3	13	0.072	7.1	8.3	0.8	2	23	295	316	294	316	0.95
4	13	0.57	56	5.5	0.2	2	23	393	415	392	415	0.90
5	13	0.012	1.1	10.8	0.3	1	20	420	439	420	441	0.92
6	13	4.3e-05	0.0042	18.5	0.8	1	23	449	472	449	472	0.98
7	13	3e-05	0.0029	19.0	2.2	1	23	493	515	493	515	0.98
8	13	7.1e-06	0.0007	20.9	3.8	1	23	522	544	522	544	0.99
9	13	1.5e-07	1.4e-05	26.2	2.3	3	23	558	578	556	578	0.96
10	13	3.4e-05	0.0033	18.8	3.2	1	23	584	606	584	606	0.99
11	13	3e-06	0.00029	22.1	2.6	2	23	613	634	612	634	0.96
12	13	1.7e-07	1.7e-05	26.0	1.4	1	23	640	662	640	662	0.99
13	13	0.0042	0.41	12.2	0.1	1	23	668	690	668	690	0.97

Sequence Information

Coding Sequence: ATGACGGGACTTTCAGTGTTACCGGCTCCTGGACTAAAACTTTTGGAGTTGGCAATACTGGCCAGTGAGCGCTGCGGCGAGCGATGCCGAGCGGCCCGGGCGGATCAACAACTTCAAGAGAATAACAGAAAGAAAATGGCCTCTAATCAGGAAtccgaaataaaaattgaaGAATTGTGTAGAACGTGTTTGTCTAAGGATAATGAGTTATACTcattatttgatattattatagGTTCAACAATCACGTTAGATTACATAGTATCATCAAGTACTGGGAtaaagATCAGCAGAAATGATGGTTTGCCTTCAACAATTTGCTGCGAGTGTAAAGAAAATGCATCAAAGGCATTTGAATTTAAGAAAAAAGCGGATGAGGCTAACATGTACCTTAGAgggatattaaaaaaagaaagctCAACATCTACTAAAGTTTTAAGTCAAGCTGAAGGTGTGAAAATAGAAGATTTGTCATCAAATGATAATGACGACTATGCCGATAGTGATTTCAATGTTTCCCTAAGCAGCGGGCCAGATTTACATGAACAAGAAGCTGTTAAAATTGAACAAGAGAGCCTAGAACGCAAGTCATGCTTTGTGTGCAAAAGCTGCTTAGTCGTTTTCGATACACATTATAAGTTACAGGAACACCAGAAGATATGCATAAAAGTTGAGTGTGATGAAACCAACCGTACTTACTGCCCACTTTGCGGTACTTGCTATAATGGTGCAGAGAATTTAACGAAACATATGTGGGAAAATCATGCAGACCTTATGGGCCCAAAAAAGAGAGGCAGACCTAAGAAGATGTTAACTAGTACCATTCTTAACAAGTTGTCAGAAAATGGATTTTGCATAACATCAATGCCAGCTAAAAAGATTGAGTGTGCACTATGCAAACAACATTTCCAAACCAAAGAAGAATTAGGATCACACTCTATAACTCATAAAGaTATGAAAGTACTGCGTTGTGGCCTTTGCAAGAAAATATACCTTGATAGGAAAAAGTTTGATCATCATGGCTGTATTGAAGAGAAAGCTGATGTTAACAATGCAGAAAATGATAAGGCTAAAACAGAGACCAATGAAAAAAAGCCACTAAATTTTCCGTCTGAAATTACACTGCGAGAATTTCTAGACCCGAACATGGATATGGAGAACATCAACTTGCTTATAGTATGTAGTATTTGTAGCTGCATATTGCAATCAGAATCGGATCTCATTAACCATCGCGATGCTGAACATCCGGAGTTGTCTCACCGGTGCAACCTCTGCACTAAGGTGTTTGCTTCTTTGCGATCAGCAGCGCGCCACAGAAGCATTTGTAAggaaattgaaagaaaatataaatgcaACACGTGTGGACTGAAATTCGCTTATGAAATATCTTTGAATAAGCATATTTTAAGATATCATGAGGGACAAAGCGTGTCGGTTAAATTTATTGACTCCAAAACCAAACGAGAAGAGAGACAGTTTCAGTGTGATACTTGCAATAGAAGTTTCTATAAGAGAGACCTGCTAGTTAAACATACTAAAATACACATGCCAATCGAAAACTTCTTCCAATGTGATGTTTGTGAAAAGAAGTTTCACAGGAGTGACAATCTTCGCTCTCACAAACGAGTTCATCAGCCGCAGCGCGAAAAGAGTTCATCTAGTAATTGCTTATGCCTTTACTGTGGCCGCAGTTTCTCTAACTCGTCGAACTTAATCGTACACATGCGGCGTCACACTGGAGAGAAGCCCTACAAATGTGATTTTTGTGGCAAAGGTTTTCCAAGATCTTCCGACCTTCAGTGTCACAGGAGATCTCACACTGGAGAGAAGCCTTGTATATGCCGTGTCTGTGGTAAAGgtttttcgCGCAGCAATAAGTTGTCCCGCCACATGCGCGTACACACTGGCCAGCGACCGTACAAGTGCACCTATTGCGAGAAGGCGTTCTCGCAGAGCAACGATCTCAACCTGCACATACGCCGACACACTGGCGACCGGCCCTACATCTGCGAAGTGTGCGGCGACAGATTCATACAGGGTACCGCGTTACAGAATCACAGAAGAGCTCATGGTCACTTTCCTGCTCCTCCCGCAGAAGCTCCTTCCGAGGTGCAAGCACTGACTTTTACAGTTCAGAATATAAGCCATAATAATAGTCACTAA
Protein Sequence: MTGLSVLPAPGLKLLELAILASERCGERCRAARADQQLQENNRKKMASNQESEIKIEELCRTCLSKDNELYSLFDIIIGSTITLDYIVSSSTGIKISRNDGLPSTICCECKENASKAFEFKKKADEANMYLRGILKKESSTSTKVLSQAEGVKIEDLSSNDNDDYADSDFNVSLSSGPDLHEQEAVKIEQESLERKSCFVCKSCLVVFDTHYKLQEHQKICIKVECDETNRTYCPLCGTCYNGAENLTKHMWENHADLMGPKKRGRPKKMLTSTILNKLSENGFCITSMPAKKIECALCKQHFQTKEELGSHSITHKDMKVLRCGLCKKIYLDRKKFDHHGCIEEKADVNNAENDKAKTETNEKKPLNFPSEITLREFLDPNMDMENINLLIVCSICSCILQSESDLINHRDAEHPELSHRCNLCTKVFASLRSAARHRSICKEIERKYKCNTCGLKFAYEISLNKHILRYHEGQSVSVKFIDSKTKREERQFQCDTCNRSFYKRDLLVKHTKIHMPIENFFQCDVCEKKFHRSDNLRSHKRVHQPQREKSSSSNCLCLYCGRSFSNSSNLIVHMRRHTGEKPYKCDFCGKGFPRSSDLQCHRRSHTGEKPCICRVCGKGFSRSNKLSRHMRVHTGQRPYKCTYCEKAFSQSNDLNLHIRRHTGDRPYICEVCGDRFIQGTALQNHRRAHGHFPAPPAEAPSEVQALTFTVQNISHNNSH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00072259;
90% Identity: iTF_00449489;
80% Identity: -