Eoch026681.1
Basic Information
- Insect
- Eremobia ochroleuca
- Gene Symbol
- sip1
- Assembly
- GCA_949629135.1
- Location
- OX451405.1:5497184-5507091[-]
Transcription Factor Domain
- TF Family
- GCFC
- Domain
- GCFC domain
- PFAM
- PF07842
- TF Group
- Unclassified Structure
- Description
- This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 7e-23 1.3e-18 68.6 0.4 1 122 365 472 365 480 0.94 2 3 0.00057 11 6.6 0.1 242 275 484 517 473 517 0.86 3 3 0.88 1.7e+04 -3.9 0.0 178 189 549 560 525 566 0.56
Sequence Information
- Coding Sequence
- ATGTCGGACGACGAAGTAATGCGGTTTGAAATCACCGACTATGATTTGGACAACGAATTCAATCCAAACAGAACCCGAAGAGCTAAAAAAGAGCACCAGATTTACGGTGTTTGGGCCAAGGACAGTGATGAGGAGGATAATGAAGACAATGTCAGACAAAGGTCTCGCAAACCCAAAGACTTTACGGCACCCATTGGGTTTGTGGCTGGTGGAGTACAACAGGCTGGTAAGAAGAAGGAGGAAAGTAAAGAAATAGAATCATCAGAAGCATCCACCTCCCGCCCCAAGTTTGCTGACAGCTCTGACGAAGATGAACAGAATGCCCCGGATGCCAGTGAGACTGCTGGTATTAGGCGACAGGGGCAAGGCATGAAGCCGGTCAACCTTGGAGGCAATGTGGGGAATTGGGAGAAGCATACTAAGGGTATTGGAGCTAAGCTGCTGTTGAAGATGGGTTACCAACCAGGCATGGGTCTAGGTAAAGAACTGCAGGGTATCTCAGCACCTGTGGAGGCCACCGTCAGGAGGGGAAGAGGAGCTATTGGTGCCTATGGACCTGAGAAAGCAGCTCAAAAAGCCAAAAAAGAAGAGGAACTCCGTCGTCTGAAAGAGAAGGGAGATGAGAAAGAGACAAAAGAAAAGAACTACAACTGGAAGAAGTCGCACAAGGGTCGCTACTTCTACCGCGATGCCGCAGACGTCATACAAGAGGGTAAACCCACGATGCATAGTATTACCAGCAACGAGCTGTCCCGCGTGCCTGTAATAGACATGACAGGCAAGGAGAAGCGAGTGCTGAGCGGCTACCACGCGCTGAgagccgccgcgccgcgcttcGAGCACGAGCCGCGGCGCAAGTGTGACAACTTTGCCGCGCCACAGCTGGTGCATAACCTTGAGCTGATGGTGGAATGTTGTGAACAGGACATAATCCAAAACGCTCGCGAGCTTCAAACAGCAGAAGACGAGATAGTTGTCCTAGAGAGAGATCTAGAGGACTGCAACATTAAGCTATCGGAACAAGACAAGGTCATCTGCAAGGTGGAAGGTATACTAGAGCGAGTGGATATGCTCAACAAGCCGGATTTGTCGTTAGAAAGGGCTCACGATGTGCTGGCTGAGTTGAAGGATACCTACCCTGTAGAATACGAGATGTTCGGCCTGGGCACCATTGCGGGTAACATCGTGAGCCCGCTGCTCAGCTCCTTGCTCGCTACCTGGGAACCGCTCTCGGCCCCCGACGAGCACATCCCTACCTTCCTAAAATGGAGGAAGTTGCTGACAGAAGAGGCGTACAACAGCCTGCTGTGGCAACACTTTGTGCCTCAACTTACTGCGGCTGCTGAAACGTGGAACCCACGTATGCCAACTCCGATGCTCCGCGCTGTATCAGCATGGCAGACCGCGTCACCCCCCCTGGCTGTCCCGCGCATGCGTCACTCGCTGCGTGCGGCGTGGCTATGGTGCGTAGAGTGGCTGGAACTCCTCGGCGCGCCGACAGTAGCAGCCATAGCGGCGCGTGCGCTGCTCCCTCGCTGGCTGGCCGCGCTGGCTGCGTGGCTCAACACCAACCCGCCGCATGCTACTGTACTTAACTCTTATACGGACTTTAAGAAAATGTTCCCGGAAGAAGTTCTCAAAGAGCCCGCCATACGAGACGCCTTCCGCAAAGCCTTAGACATGATGAATCGAAGCGCAGACATAGACTCAGTGGAACCTCCCCCGCCTCCGCGCTTCACCATGCCCGAGCCGAAAGAAACATCCCGTCTAGTAGAAGTTTTAGCATCCGCTACACAAGCCAAAAGCTTCTCAGAGTTACTTGAAACTAGATGTATCGAAAAAGGGATCACTTTTGTACCTATAGCGGGAAAAACCAGGGAAGGTAGACCGTTGTATAAAATTGGAGATCTTCAGTGTTATGTTATAAGAAATGTGATCATGTTTTCCGATGATAGTGGTAGGACTTTCAACCCTATTAGTATGGACAAGTTGTTGAATATGGTTGAGGATTGA
- Protein Sequence
- MSDDEVMRFEITDYDLDNEFNPNRTRRAKKEHQIYGVWAKDSDEEDNEDNVRQRSRKPKDFTAPIGFVAGGVQQAGKKKEESKEIESSEASTSRPKFADSSDEDEQNAPDASETAGIRRQGQGMKPVNLGGNVGNWEKHTKGIGAKLLLKMGYQPGMGLGKELQGISAPVEATVRRGRGAIGAYGPEKAAQKAKKEEELRRLKEKGDEKETKEKNYNWKKSHKGRYFYRDAADVIQEGKPTMHSITSNELSRVPVIDMTGKEKRVLSGYHALRAAAPRFEHEPRRKCDNFAAPQLVHNLELMVECCEQDIIQNARELQTAEDEIVVLERDLEDCNIKLSEQDKVICKVEGILERVDMLNKPDLSLERAHDVLAELKDTYPVEYEMFGLGTIAGNIVSPLLSSLLATWEPLSAPDEHIPTFLKWRKLLTEEAYNSLLWQHFVPQLTAAAETWNPRMPTPMLRAVSAWQTASPPLAVPRMRHSLRAAWLWCVEWLELLGAPTVAAIAARALLPRWLAALAAWLNTNPPHATVLNSYTDFKKMFPEEVLKEPAIRDAFRKALDMMNRSADIDSVEPPPPPRFTMPEPKETSRLVEVLASATQAKSFSELLETRCIEKGITFVPIAGKTREGRPLYKIGDLQCYVIRNVIMFSDDSGRTFNPISMDKLLNMVED
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -