Basic Information

Insect: Eremobia ochroleuca
Gene Symbol: clz9
Assembly: GCA_949629135.1
Location: OX451391.1:9191889-9194564[+]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 1.3e-07 2.9e-05 24.7 0.0 3 36 10 43 8 48 0.93

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	1.3e-07	2.9e-05	24.7	0.0	3	36	10	43	8	48	0.93

Sequence Information

Coding Sequence: ATGAACGCAAAAAAGAAATATACGGTCGAGGATCTTGAAAGTGCGCTTATTGCAATTAATAATGGCAGTAGCGTCTATAAGGCTTCCCGAGAATACAACATTCCAGAAACGACATTGAGAGACAAACGTGACCAAAAATATAGTGGCCATATAGCCGGTCGCAAAACGGTACTCTCAAAATCGgaggaaacaaaaattgttgaCTGGATCCATTATCTAGGAAAACATGGTTTCCCAGTTTCTAAAGAGCAGTTGAAGCAAGGAGTGGCAAAGCTAGTTGAAAATTTAAACCGTCCAAATACTTTCAAAGATGGTATGCCTGGTAAGCACTGGCTTGCCAATTTTTTGTCAAGACACCCAACTGTAGCAAAGAGAGTAGCACAAACTTTACCAACTCATCGAAACAAAATTAATGAACAAGATGTGCGCAACTGGTTTGATAGAGTCAAAAGTTATtttgaaactaataatttattaggtgTGCTTGAGGATGAATCAAGAGTGTATAACTGTGACGAAACGGCCTTTTTTCTCTGCCCCAAAGAAAAAGATGTCTTAGTAAAAAAGGGCAGCAAGCGTGTGTACAATAGAGTTGCTAATGATGAGAAAGAGTGCCTAACAGTTTTAGTCAATGTGTCTGCTGGAGGTAAAATAGCTCCACCTATGGTATTGTATCCATACAAACGCCTGCCTAAAAACTTGCCTCTGACGGTGCCACCAACGTGGGGTATAGGATGTACGGAATCAGGGTGGATGAATATGGAGGCTTTTTATGAATATGTCGCAAATGTATTTTACAAGTGGttactagaaaataaaataacactgcCAATTGCCCTGTTCATGGATGGACATACCTCACACATTTCGTTGCCATTAAGTCTTTTCTGCAAAGAAAAGGGAATCATACTAGTTGCGTTATTGCCAAATTCGACACACCTTCTTCAACCACTTGACGTTGGAGTTTTTCGACCTGTTAAGGGTACATGGAAAAACGTAGTACACGACTTcagagtaaataataattatgccaAATTAAAACGTACAGATTTCGCCATggaagtaaaaaaatgtttcgatATAAGTATTAAAGtagatacaataaaaaatagcttTAGAAGCGCTGGAATCTTTCCATTTGACGCCAATAATATTGACTTCTCAAAGGTAATGCCACGGGACTCACGGGAAGCTACTGCTATTAATTCACAGGACCAGTTATATACAAAGGAAAAGAATAGTTTTTTTGAGAAGTTTGAGCAACGACTGGCCCCAGAAGTTCTTCAACTATTTGTCGAATCTGGAAATGAGTGGGAAGGTGAGGAAAAGTATAGATGTTTATTTGGGTTCTGGAAGAAAATACAACAAGAAGAACCTCCTCCTATCTTCAACGATACTACAATTGCGAACAACATACGTGATTGTGATATATCAGATGTTGTTTCGAATATAGAAATAGGTCCAAACGGTAGTATCATACTTCCTTTGAGCCTAAGTACTAGATCAATCATGAGCCACGATATTCCCCAACTTGATATGGATCAGACATTGACACCAGGAAATAACCATTCAAGGCGATATTCTTCTGATTCTATTTTGCAAATAGAAACCTCACTTGGTCATAATATAACTGAAGATGAGCCTCAACCTTGTTGTTCAAGAACTCAAATACTTCCTTTGAGTCTAAGTCCTAGATCAATCATGAGCCATGATATTCCCCAACTTGATATGGATCAGACATTGACACCAGGAAATAACCATTCAAGGCGATATTCTTCTGATTCTATTTTGCAAATAGAAACCTCACTTGGTCATAATATAACTGAAGATGAGCCTCAACCTTGTTGTTCAAGAACTCAAATACTTCCTTTGAGTCTAAGTCCTAGATCAATCATGAGCCATGATATTCCCCAACTTGATATGGATCAGACATTGACACCAGGAAATAATCATTCAAGACGATATTCATCTGATTCTATTTTGCAAATAGAATCACTTGGGCATATAACTGAAGATGTGCCGCAACCTTGCTGTTCAAGAACTCAACATTTTCAATCATCACCACCAATGTCACGGCAGTCAAGCAGTGATCCAACGCTGGATATTTTTCACCCTGCTGATAACACTAATAACGCCAACCAAagtacaaataatataatagcagTTAAAAGTACACCTAACAAGAAACCAAATTTTCCTACTCCGTTCAAAACAGCGTTTTATTTTCCACAATCTCCAAAGAAAACAATGActagaaaaactaaaaaacaaacacCAACGGTGGCAACTGCTGACGACTTTATAGAATATCAATGTAGAATAGCAAAAGAAAAGGAGGAAAAAGCGGAGGGCATTCTTAAGAGACGAGCAgatagattaaaaaaacaagaagaaaggaaatctaaaaaaaataaaaccatacagAAGAGGAAAACAGTACGAAAGACAAACAACCtggacaaaataaatgaaagacaaGAAACTGAGGGAAATATAGAAGACgacaatatacatatagactTACGACATCGAAGAAATAATCCATTTTCATTAAACTCTGAATCATCCAGCAACGATGAAGACTTTACGTTGACCATGAGAAATAAAACGGCTAATAGGGTTAAGAAAACTTACACAACGTTGTTCGGTGAATCAACATCAGATAGTTCAATGTGA
Protein Sequence: MNAKKKYTVEDLESALIAINNGSSVYKASREYNIPETTLRDKRDQKYSGHIAGRKTVLSKSEETKIVDWIHYLGKHGFPVSKEQLKQGVAKLVENLNRPNTFKDGMPGKHWLANFLSRHPTVAKRVAQTLPTHRNKINEQDVRNWFDRVKSYFETNNLLGVLEDESRVYNCDETAFFLCPKEKDVLVKKGSKRVYNRVANDEKECLTVLVNVSAGGKIAPPMVLYPYKRLPKNLPLTVPPTWGIGCTESGWMNMEAFYEYVANVFYKWLLENKITLPIALFMDGHTSHISLPLSLFCKEKGIILVALLPNSTHLLQPLDVGVFRPVKGTWKNVVHDFRVNNNYAKLKRTDFAMEVKKCFDISIKVDTIKNSFRSAGIFPFDANNIDFSKVMPRDSREATAINSQDQLYTKEKNSFFEKFEQRLAPEVLQLFVESGNEWEGEEKYRCLFGFWKKIQQEEPPPIFNDTTIANNIRDCDISDVVSNIEIGPNGSIILPLSLSTRSIMSHDIPQLDMDQTLTPGNNHSRRYSSDSILQIETSLGHNITEDEPQPCCSRTQILPLSLSPRSIMSHDIPQLDMDQTLTPGNNHSRRYSSDSILQIETSLGHNITEDEPQPCCSRTQILPLSLSPRSIMSHDIPQLDMDQTLTPGNNHSRRYSSDSILQIESLGHITEDVPQPCCSRTQHFQSSPPMSRQSSSDPTLDIFHPADNTNNANQSTNNIIAVKSTPNKKPNFPTPFKTAFYFPQSPKKTMTRKTKKQTPTVATADDFIEYQCRIAKEKEEKAEGILKRRADRLKKQEERKSKKNKTIQKRKTVRKTNNLDKINERQETEGNIEDDNIHIDLRHRRNNPFSLNSESSSNDEDFTLTMRNKTANRVKKTYTTLFGESTSDSSM

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01264515; iTF_01264516; iTF_01264518; iTF_01264517; iTF_01264519; iTF_01264513; iTF_01264522; iTF_01264527; iTF_00237490; iTF_00667368; iTF_01264520; iTF_01264521; iTF_00667370; iTF_00667371; iTF_00667372; iTF_00667373; iTF_00667374; iTF_00667375; iTF_00667376; iTF_00667377; iTF_00667378; iTF_00667379; iTF_00147372; iTF_00147373; iTF_00147375; iTF_00147374; iTF_00147376; iTF_01020210; iTF_01020209; iTF_00237491; iTF_00237492; iTF_00667380; iTF_00237493; iTF_01192629; iTF_00237494; iTF_00667382; iTF_00667384; iTF_01192630; iTF_00794491; iTF_00794490; iTF_01152093; iTF_01264512;
90% Identity: iTF_00667380;
80% Identity: -