Basic Information

Insect: Aporophyla nigra
Gene Symbol: clz9
Assembly: GCA_947507805.1
Location: OX382292.1:9027280-9029763[+]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 1.4e-07 2e-05 24.8 0.0 3 36 10 43 8 48 0.93

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	1.4e-07	2e-05	24.8	0.0	3	36	10	43	8	48	0.93

Sequence Information

Coding Sequence: atgaacgcaaaaaagaaatatacggtcgaggatcttgaaagtgcgcttattGCAATTAATAATGGCAGTAGCGTCTATAAGGCTTCCCGAGAATACAACATTCCAGAAACGACATTGAGAGACAAACGTGACCAAAAATATAGTGGCCATATAGCCGGTCGCAAAACGGTACTCTCAAAATCGGAGGAAACAAAAATTGTTGACTGGATCCATTATCTAGGAAAACATGGTTTCCCAGTTTCTAAAGAGCAGTTGAAGCAAGGAGTGGCAAAGCTAGTTGAAAATTTAAACCGTCCAAATACTTTCAAAGATGGTATGCCTGGTAAGCACTGGCTTGCCAATTTTTTGTCAAGACACCCAACTGTAGCAAAGAGAGTAGCACAAACTTTACCAACTCATCGAAACAAAATTAATGAACAAGATGTGCGCAACTGGTTTGATAGAGTCAAAAGTTATTTTGAAACTAATAATTTATTAGGTGTGCTTGAGGATGAATCAAGAGTGTATAACTGTGACGAAACGGCCTTTTTTCTCTGCCCCAAAGAAAAAGATGTCTTAGTAAAAAAGGGCAGCAAGCGTGTGTACAATAGAGTTGCTAATGATGAGAAAGAGTGCCTAACAGTTTTAGTCAATGTGTCTGCTGGAGGTAAAATAGCTCCACCTATGGTATTGTATCCATACAAACGCCTGCCTAAAAACTTGCCTCTGACGGTGCCACCAACGTGGGGTATAGGATGTACGGAATCAGGGTGGATGAATATGGAGGCTTTTTATGAATATGTCGCAAATGTATTTTACAAGTGGTTACTAGAAAATAAAATAACACTGCCAATTGCCCTGTTCATGGATGGACATACCTCACACATTTCGTTGCCATTAAGTCTTTTCTGCAAAGAAAAGGGAATCATACTAGTTGCGTTATTACCAAATTCGACACACCTTCTTCAACCACTTGACGTTGGAGTTTTTCGACCTGTTAAGGGTACATGGAAAAACGTAGTACACGACTTCAGAGTAAATAATAATTATGCCAAATTAAAACGTACAGATTTCGCCATGGAAGTAAAAAAATGTTTCGATATAAGTATTAAAGTAGATACAATAAAAAATAGCTTTAGAAGCGCTGGAATCTTTCCATTTGACGCCAATAATATTGACTTCTCAAAGGTAATGCCACGGGACTCACGGGAAGCTACTGCTATTAATTCACAGGACCAGTTATATACAAAGGAAAAGAATAGTTTTTTTGAGAAGTTTGAGCAACGACTGGCCCCAGAAGTTCTTCAACTATTTGTCAAATCTGGAAATGAGTGGGAAGGTGAGGAAAAGTATAGATGTTTATTTGGGTTCTGGAAGAAAATACAACAAGAAGAACCTCCTCCTATCTTCAACGATACTACAATTGCGAACAACATACGTGATTGTGATATATCAGATGTTGTTTCGAATATAGAAATAGGTCCAAACGGTAGTATCATACTTCCTTTGAGCCTAAGTCCTAGATCAATCATGAGCCACGATATTCCCCAACTTGATATGGATCAGACATTGACACCAGGAAATAACCATTCAAGGCGATATTCTTCTGATTCTATTTTGCAAATAGAAACCTCACTTGGTCATAATATAACTGAAGATGAGCCTCAACCTTGTTGTTCAAGAACTCAAATACTTCCTTTGAGTCTAAGTCCTAGATCAATCATGAGCCATGATATTCCCCAACTTGATATGGATCAGACATTGACACCAGGAAATAATCATTCAAGACGATATTCATCTGATTCTATTTTGCAAATAGAATCACTTGGGCATATAACTGAAGATGTGCCGCAACCTTGCTGTTCAAGAACTCAACATTTTCAATCATCACCACCAATGTCACGGCAGTCAAGCAGTGATCCAACGCTGGATATTTTTCACCCTGCTGATAACACTAATAACGCCAACCAAAGTACAAATAATATAATAGCAGTTAAAAGTACACCTAACAAGAAACCAAATTTTCCTACTCCGTTCAAAACAGCGTTTTATTTTCCACAATCTCCAAAGAAAACAATGACTAGAAAAACTAAAAAACAAACACCAACGGTGGCAACTGCTGACGACTTTATAGAATATCAACGTAGAATAGCAAAAGAAAAGGAGGAAAAAGCGGAGGGCATTCTTAAGAGACGAGCAGATAGATTAAAAAAACAAGAAGAAAGGAAATCTAAAAAAAATAAAACCATACAGAAGAGGAAAACAGTACGAAAGACAAACAACCTGGACAAAATAAATGAAAGACAAGAAACTGAGGGAAATATAGAAGACGACAATATACATATAGACTTACGACATCGAAGAAATAATCCATTTTCATTAAACTCTGAATCATCCAGCAACGATGAAGACTTTACGTTGACCATGAGAAATAAAACGGCTAATAGGGTTAAGAAAACTTACACAACGTTGTTCGGTGAATCAACATCAGATAGTTCAATGTGA
Protein Sequence: MNAKKKYTVEDLESALIAINNGSSVYKASREYNIPETTLRDKRDQKYSGHIAGRKTVLSKSEETKIVDWIHYLGKHGFPVSKEQLKQGVAKLVENLNRPNTFKDGMPGKHWLANFLSRHPTVAKRVAQTLPTHRNKINEQDVRNWFDRVKSYFETNNLLGVLEDESRVYNCDETAFFLCPKEKDVLVKKGSKRVYNRVANDEKECLTVLVNVSAGGKIAPPMVLYPYKRLPKNLPLTVPPTWGIGCTESGWMNMEAFYEYVANVFYKWLLENKITLPIALFMDGHTSHISLPLSLFCKEKGIILVALLPNSTHLLQPLDVGVFRPVKGTWKNVVHDFRVNNNYAKLKRTDFAMEVKKCFDISIKVDTIKNSFRSAGIFPFDANNIDFSKVMPRDSREATAINSQDQLYTKEKNSFFEKFEQRLAPEVLQLFVKSGNEWEGEEKYRCLFGFWKKIQQEEPPPIFNDTTIANNIRDCDISDVVSNIEIGPNGSIILPLSLSPRSIMSHDIPQLDMDQTLTPGNNHSRRYSSDSILQIETSLGHNITEDEPQPCCSRTQILPLSLSPRSIMSHDIPQLDMDQTLTPGNNHSRRYSSDSILQIESLGHITEDVPQPCCSRTQHFQSSPPMSRQSSSDPTLDIFHPADNTNNANQSTNNIIAVKSTPNKKPNFPTPFKTAFYFPQSPKKTMTRKTKKQTPTVATADDFIEYQRRIAKEKEEKAEGILKRRADRLKKQEERKSKKNKTIQKRKTVRKTNNLDKINERQETEGNIEDDNIHIDLRHRRNNPFSLNSESSSNDEDFTLTMRNKTANRVKKTYTTLFGESTSDSSM

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00667383;
90% Identity: iTF_00667380;
80% Identity: -