Eoch004037.1
Basic Information
- Insect
- Eremobia ochroleuca
- Gene Symbol
- -
- Assembly
- GCA_949629135.1
- Location
- OX451385.1:19081766-19084594[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.1e-07 2.6e-05 24.9 0.1 4 37 16 50 15 57 0.85 2 2 4.9 1.1e+03 0.4 0.0 2 12 456 466 455 473 0.86
Sequence Information
- Coding Sequence
- atgCCAAAATATAAACGAATAAAAGAGACGAAGTATTCATTAGCTGATCTAATAGAAGCTGTCGAAAAtgtacgacaaaaaaaaattaatagctACCAAGCCTCCGTAAAATACGGAATACCAAGGTCAACCATTATTCACCGTTTATACGGAACACGCGGTGCCAAACAGTCAACGCCTGGCAGACCTACTGAATTGTCAAAAGAGTGGGAAACTAAAGTAGCTTCTAATCTCCATGTGATGGAAAAATGTGGGTATCCATTATCCTCCAAGGAAGTAAAAATATTGATATCTGATTATATTCGAAGGAACGGAATCGTTACGAGATTTAAAGATAACTATCCTGGGAAGGAATGGTTTAGAGGATTTAAAAAACGAAACAAATTAAGTTTGAAAAAGCCACAGTCTGTAGAAATAGCTCGAAAAAAAGCATGTGATCCTTTCATAGTTAACGATTATTTCGATATGTTACAACGAACAATACAAGAGTGTGGTTTGGCTGACAAACCGCAATGTATATATAATTTGGATGAAACCAGCTTTTGTAGTGACCCCACCAAGACTAAAGTTGTGGGTCTGATGGGGTTTCCCTCTACTAGAACGACAGGCTCTCCTGGGAGGAATAACACCACTGTGCTCTTAGCTACGAATGCACTTGGCAAAAAGATCCCACCCTTAATAATATTTCAAGGGAAACATCTGTGGAGCGAGTGgctgtttaaaaatgaaaacattcaTACAGCTTACGCTGTCAGTAAAAAAGGGTGGATGGAGACCACCATTTTCGAACAATACATCAAAGCCGTTTTTTTGCCAGCTATCGGAGCAGAACGACCAGTCTTATTGGTCTATGATGGTCATAAGACACATGTAGATTTGAATGTCATAGATCTTCTAGTTGCCGAAAACATTACGGTTCTTAAACTGCCGGCTCACTCATCCCACATACTGCAGCCATTAGACTGTAGTACAATGAAACCTATGAAAGACAAATGGGACAGCGAACTTGTGAAATGGCAAAGACTCCATGTGGGAGCAAAACTCCCAAAACAAGAATTTGCCAGAATCATAACTAATATATGGGATGATTTAAATCCTGTTATCATTCAAAATGGCTTCAGGAAAGCGGGCATATGCCCTTTGAACAAAGATGCAATCCCAAAAGAAAAATTCGACAGTCTGGCATGGTCAAGATGGGAAGAACACCAGCAGCAAAAAAAACAGCTTCGTAATGATACTGATCACAATGGTGAAGAAAATGTTGAAGGAAGTCACACCAAGAAAGATAACAGTCAGAAAGAACATAAAGTACCAACACTAATAAGTGTATGCCTTAAAACAATTAACAGTGAGATACGACGATTGCCAGACGAAATTGATGAGGCTATTGCAAACATTACACGGGATATGAAGAAAAAGCTACCGACAGAAAATGGTACAAAGGCTGATATGAGCACGTACTCAGatGCCGTTGTCTGCGGCGGAAAGATGTCGAAGGTATCGCGAAAAACTGAAACAGTCTAA
- Protein Sequence
- MPKYKRIKETKYSLADLIEAVENVRQKKINSYQASVKYGIPRSTIIHRLYGTRGAKQSTPGRPTELSKEWETKVASNLHVMEKCGYPLSSKEVKILISDYIRRNGIVTRFKDNYPGKEWFRGFKKRNKLSLKKPQSVEIARKKACDPFIVNDYFDMLQRTIQECGLADKPQCIYNLDETSFCSDPTKTKVVGLMGFPSTRTTGSPGRNNTTVLLATNALGKKIPPLIIFQGKHLWSEWLFKNENIHTAYAVSKKGWMETTIFEQYIKAVFLPAIGAERPVLLVYDGHKTHVDLNVIDLLVAENITVLKLPAHSSHILQPLDCSTMKPMKDKWDSELVKWQRLHVGAKLPKQEFARIITNIWDDLNPVIIQNGFRKAGICPLNKDAIPKEKFDSLAWSRWEEHQQQKKQLRNDTDHNGEENVEGSHTKKDNSQKEHKVPTLISVCLKTINSEIRRLPDEIDEAIANITRDMKKKLPTENGTKADMSTYSDAVVCGGKMSKVSRKTETV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00237506; iTF_00667324; iTF_01118239;
- 90% Identity
- iTF_00237506; iTF_00667324; iTF_01118239;
- 80% Identity
- -