Eoch010834.1
Basic Information
- Insect
- Eremobia ochroleuca
- Gene Symbol
- -
- Assembly
- GCA_949629135.1
- Location
- OX451390.1:22314541-22316658[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1e-08 2.3e-06 28.2 0.0 4 37 16 50 15 57 0.85 2 2 5.4 1.2e+03 0.3 0.0 2 12 456 466 455 473 0.86
Sequence Information
- Coding Sequence
- atgCCAAAATATAAACGAATAAAAGAGACGAAGTATTCATTAGCTGATCTAATAGAAGCTGTCGAAAAtgtacgacaaaaaaaaattaatagcaACCAAGCCTCCGTAAAATACGGAATACCAAGGTCAACCATTATTCACCGTTTATACGGAACACGCGGTGCCAAACAGTCAACGCCTGGCAGACCTACTGAATTGTCAAAAGAGTGGGAAACTAAAGTAGCTTCTAATCTCCATGTGATGGAAAAATGTGGGTATCCATTATCCTCCAAGGAAGTAAAAATATTGATATCTGATTATATTCGAAGGAACGGAATCGTTACGAGATTTAAAGATAACTATCCTGGGAAGGAATGGTTTAGAGGATTTAAAAAACGAAACAAATTAAGTTTGAAAAAGCCACAGTCTGTAGAAATAGCTCGAAAAAAAGCATGTGATCCTTTCATAGTTAACGATTATTTCGATATGTTACAACGAACAATACAAGAGTGTGGTTTGGCTGACAAACCGCAATGTATATATAATTTGGATGAAACCAGCTTTTGTAGTGACCCCACCAAGACTAAAGTTGTGGGTCTGATGGGGTTTCCCTCTACTAGAACGACAGGCTCTCCTGGGAGGAATAACACCACTGTGCTCTTAGCTACGAATGCACTTGGCAAAAAGATCCCACCCTTAATAATATTTCAAGGGAAACATCTGTGGAGCGAGTGgctgtttaaaaatgaaaacattcaTACAGCTTACGCTGTCAGTAAAAAAGGGTGGATGGAGACCACCATTTTCGAACAATACATCAAAGCCGTTTTTTTGCCAGCTATCGGAGCAGAACGACCAGTCTTATTGGTCTATGATGGTCATAAGACACATGTAGATTTGAATGTCATAGATCTTCTAGTTGCCGAAAACATTACGGTTCTTAAACTGCCGGCTCACTCATCCCACATACTGCAGCCATTAGACTGTAGTACAATGAAACCTATGAAAGACAAATGGGACAGCGAACTTGTGAAATGGCAAAGACTCCATGTGGGAGCAAAACTCCCAAAACAAGAATTTGCCAGAATCATAACTAATATATGGGATGATTTAAATCCTGTTATCATTCAAAATGGCTTCAGGAAAGCGGGCATATGCCCTTTGAACAAAGATGCAATCCCAAAAGAAAAATTCGACAGTCTGGCATGGTCAAGATGGGAAGAACACCAGCAGCAAAAAAAACAGCTTCGTAATGATACTGATCACAATGGTGAAGAAAATGTTGAAGGAAGTCACACCAAGAAAGATAACAGTCAGAAAGAACATAAAGTACCAACACTAATAAGTGTATGCCTTAAAACAATTAACAGTGAGATACGACGATTGCCAGACGAAATTGATGAGGCTATTGCAAACATTACACGGGATATGAAGAAAAAGCTACCGACAGAAAATGGTACAAAGGCTGATATGAGCACGTACTCAGAAGATGAAGGCCCTGaagttttttttcaaaatattttggaaGAAAGCATTGATGAAGATTTGCAGGAGCCACTACCATTATCTACTAGACAAGGACAAGAAGAAAATAgacctaaaataaaaagtgaaagattGAATAAAGGGCAGAAAAAAACATTAAGGCAGAATGAAGTAAGTGATTCAGggtag
- Protein Sequence
- MPKYKRIKETKYSLADLIEAVENVRQKKINSNQASVKYGIPRSTIIHRLYGTRGAKQSTPGRPTELSKEWETKVASNLHVMEKCGYPLSSKEVKILISDYIRRNGIVTRFKDNYPGKEWFRGFKKRNKLSLKKPQSVEIARKKACDPFIVNDYFDMLQRTIQECGLADKPQCIYNLDETSFCSDPTKTKVVGLMGFPSTRTTGSPGRNNTTVLLATNALGKKIPPLIIFQGKHLWSEWLFKNENIHTAYAVSKKGWMETTIFEQYIKAVFLPAIGAERPVLLVYDGHKTHVDLNVIDLLVAENITVLKLPAHSSHILQPLDCSTMKPMKDKWDSELVKWQRLHVGAKLPKQEFARIITNIWDDLNPVIIQNGFRKAGICPLNKDAIPKEKFDSLAWSRWEEHQQQKKQLRNDTDHNGEENVEGSHTKKDNSQKEHKVPTLISVCLKTINSEIRRLPDEIDEAIANITRDMKKKLPTENGTKADMSTYSEDEGPEVFFQNILEESIDEDLQEPLPLSTRQGQEENRPKIKSERLNKGQKKTLRQNEVSDSG
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00667345;
- 90% Identity
- iTF_00667345;
- 80% Identity
- -