Basic Information

Insect: Eremobia ochroleuca
Gene Symbol: -
Assembly: GCA_949629135.1
Location: OX451396.1:7294061-7295962[-]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 4.7e-15 1.1e-12 48.5 0.0 1 44 17 60 17 60 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	4.7e-15	1.1e-12	48.5	0.0	1	44	17	60	17	60	0.95

Sequence Information

Coding Sequence: ATGCCGAATAAATATCAGAGAAAAGCCATAGCCACTCGTGGTTGTTGGAGTGAAGACTCACTAAAAGCTGCTATAAATTCCATCAAAAATGGAGAATTATCAGTGTACAGAGCAGCAATTATCTACGGCATACCTCGTAAAACACTTGAAAGAAGGTACAAGACAAACAACGACAAAAAGGGGCCAATGGGACCTACCTCTATGCTTGGAgaccaaaatgaaaaaaaacttgCTGATCATATTAAAACGATGCAAGAAAAAGGATTCCCTTTGACAATCAGTGATGTAAGAGTGATTGCCTTTCAGTTTGCTGAGCAATTAAACATCaaacataaattcaataaatcagAGGAAAAGGCTGGCTATGATTGGCTGCAGATGTTTTTACGCAGACACCCAGATATTGTTTTGAGAAAGTCTGAAGGAGTTTCAGTAGCCCGTTGTCAAGGTATGAACAGAGTGGAGGTTAGTGCTTACTTTGATTTGTTAGAAAAAATTCTCATAGACAATGATTTGATGACAAAACCTAATTGTGTGTTCAATATGGATGAATCAGGCCTACAGTTGAACAATCGCCCTGGACATGTACTCGCGGCAAAGGGTACTAAAGCTGTATCCACGACAACGTCAACTGAAAAGGGTGAAACCATTACAATCATAGCATGTTGCAATGCTGAGGGCACTTTTTTACCACCGGCGTGTATTATGAAAGGtaagaataaaaaaagtgaatatGATGATGGAATGCCTCCAGGATCTCGTATTTTCATGTCTGAAAAATCTGCTTATATCACATCAGCAATATTTTTAGAATGGCTCAAAATACATTTTATGCCTAGAAAGCCGCAgggaaaagttttattattgcttGATGGTCACTCCACGCACTGTAATTCAGTAGAAATGCTTGAATATGCCAATGAAAATGAGATCATTCTTTTGTCTATGCCGAGCCATACGTCTCATTTTTTACAGCCTCTTGATAGGGCAgtttttaaatccctgaaacaTCACTTTTATGAACAGTGCCGGCTTTGGATAAACCAAAATCCAGGTCGTCGAATCACAAGACTCTCATTTGGGTCATTATTAAATAAAGCATGGGGTAAGGCAGCCACAGCCGAAAACGCTATTTCTGGATTTAGAGCATGTGGAGTGTTCCCATTTAATCCAGCAGCAATACCTGATTATGCATTCATTAGTGACCTTGGAGTGACTAACATTCATTCAAGTTTACCTGTTTCTACAAGTGTAACTTCCATCACTCCATCAAATCAAAGAGAAACAGGTGAAAATGAACCATTAGCAATACCAGGAACATCTGCTGATCAATGGACGCCTTCGCGAATTTTAAAAGACATATCCCCTATTCCtcaaaaaataatggaacttcgTAAACGTAGCAAACAGGTTGGCAAACTATTGACTTCAGAAGAGCACATAGCATTAAGAAAGGATAAAGAAAACGAAAAGAATTTGAGAGAAAATAGGCGTAAAGTTaagcaagaaaaaaaattggttacacCCAAAGATAAGAAGACTGATACAAATAGGATTAGAAAACGTAAAGCTGTAAGGCGTATTAGCGAGAGCAGTTCTGATCTCAGTGAGCCAGTATTGTGTGATACATCAGATGAAGAAGATAAAGAGAACGAAGCAGATAACTGTGCTGGATGTGGAGAAAATTATTATAAGACTCATCTTGTGGAAGATTGGCTCCAGTGCCTTATTTGTGAAAGATGGGTACATGAAAACTGTACCGAATTTGATGATATGTGCTCCAAATGTggacaaaagaagaaaaagggGGCTAAACAAGTTGAATTTCAGGGTAAGGGAAAGGGAAAAGGCAAGTCAAGTACTGGTCATCTATCCCATATAGCTACGGCCAACTCACCCTGA
Protein Sequence: MPNKYQRKAIATRGCWSEDSLKAAINSIKNGELSVYRAAIIYGIPRKTLERRYKTNNDKKGPMGPTSMLGDQNEKKLADHIKTMQEKGFPLTISDVRVIAFQFAEQLNIKHKFNKSEEKAGYDWLQMFLRRHPDIVLRKSEGVSVARCQGMNRVEVSAYFDLLEKILIDNDLMTKPNCVFNMDESGLQLNNRPGHVLAAKGTKAVSTTTSTEKGETITIIACCNAEGTFLPPACIMKGKNKKSEYDDGMPPGSRIFMSEKSAYITSAIFLEWLKIHFMPRKPQGKVLLLLDGHSTHCNSVEMLEYANENEIILLSMPSHTSHFLQPLDRAVFKSLKHHFYEQCRLWINQNPGRRITRLSFGSLLNKAWGKAATAENAISGFRACGVFPFNPAAIPDYAFISDLGVTNIHSSLPVSTSVTSITPSNQRETGENEPLAIPGTSADQWTPSRILKDISPIPQKIMELRKRSKQVGKLLTSEEHIALRKDKENEKNLRENRRKVKQEKKLVTPKDKKTDTNRIRKRKAVRRISESSSDLSEPVLCDTSDEEDKENEADNCAGCGENYYKTHLVEDWLQCLICERWVHENCTEFDDMCSKCGQKKKKGAKQVEFQGKGKGKGKSSTGHLSHIATANSP

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00406636;
90% Identity: iTF_01264325;
80% Identity: iTF_00667272;