Ebal025136.1
Basic Information
- Insect
- Episyrphus balteatus
- Gene Symbol
- -
- Assembly
- GCA_026256485.1
- Location
- JAGTYB010000071.1:1987343-1991560[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 13 5.2 6.2e+02 2.0 1.8 1 23 251 275 251 275 0.91 2 13 0.085 10 7.6 4.0 1 21 281 301 281 304 0.80 3 13 7 8.4e+02 1.6 0.5 1 9 309 317 309 319 0.87 4 13 0.46 56 5.3 3.8 1 13 338 350 338 362 0.77 5 13 3.3e-06 0.0004 21.5 3.6 1 23 368 390 368 390 0.98 6 13 0.005 0.6 11.5 1.1 1 23 396 418 396 418 0.95 7 13 3.4e-05 0.004 18.3 0.9 1 23 424 446 424 446 0.99 8 13 2.6e-05 0.0031 18.7 1.1 1 23 452 475 452 475 0.92 9 13 0.0003 0.036 15.3 2.6 1 23 490 512 490 512 0.98 10 13 0.00019 0.023 16.0 2.6 1 23 517 540 517 540 0.97 11 13 0.00034 0.04 15.2 1.2 1 23 546 568 546 568 0.97 12 13 0.00036 0.043 15.1 0.3 1 23 573 595 573 595 0.97 13 13 3.1e-07 3.7e-05 24.7 1.9 1 23 601 623 601 623 0.98
Sequence Information
- Coding Sequence
- ATGTGCAGTGTGTTCAAATTAGATTTAAATAAATATTGTATCGAAGATGTTTGTAGAACTTGTGGTAGATGTGACGTTATAACATCTGCCAGTCTTGTAAATATATTTACTTTTGATCCTCAGGATGTGCAAAAACTTAATATTCTACGAATGTTTGATTTATGGAAATTAAATATATCTGAAGATGATAGCCTGCCTCAAAAAATGTGTAAACAATGTGTTGGGAAATTCAACCTAGTTCACAGTTTTCGCAAACAGTGCGAAAACATTCAAAGTGCTTTTAAAATACTCTTGGCCGAGCAACGTAGGTTAAAATCAGCCGAAAAGATTGCTAAGGAATCCTCCAAACTTGAGCAATTAACTAAAATTCAACCGAAACTCGAGGAACAACTCCCAAATAATGCTTCCACGACATTTGAATGTTTTGACGAGATTCCCTTTGAAGATGGAGAGTTCAAGAGTATTCAATACTTTGAACTTGAACCTCACAAACCTTTAGAATCCAACAGTCAAATTATTAAAGACCAAGAAAAAACAGAAACGCCAACTGACCTGATAGATAATTCATCAGATTTGTTTTATGGTGATGATAATGGCGATGGTGACATTGAAGACGATTGGAATGCAGTAGCTGAAGATCTCGTTCCAAAATTAGAGCTAAATAACGATGATTCCAGTTTGGATTCAGATTTACTTAGCTCAGATGATGAACGAAAAGTAAATCGAAAAAGCAAAATAAAACCTAATAAATTTAAGTGTGAATTTTGTAAAAACTTCTGCTTGGAAAACCAAGAGGATCTAGATAATCATGTTAAAGAAATCCACTCGACTGACACTCCTTATACATGTTCTCTTTGCACGAAAACCTTTACCAATGCCAAGCAACGAAATTGTCACTTTATGGTTAGCCATAAATGGAAATCACACGAATGTGATGTTTGCCACAAAATGATAAAAGGTGGCAAACCGGGTTTGAAAAATCACAAAGATAATGTCCACAATAAATCTGATCATGAGTGCAATATATGCCATAAAAAGTTTGAAAATATCTCACTAAGTCGTTTTAGATATCATCTACGATGGCATGATAGTTCGAAGCTTTTCTCTTGCAAATCTTGTGATAAAAGTTTTGTAACTCGATATCATTTGGAAGAACATGAGCGTACACATACGGATGAGAAGTCGTTTTTATGTAGTATATGCGGATTAGGGTTACGATGTAAACAAAATCTTATATGGCATATGAAGACGCATACAGGAGAAAGAACGTATCAGTGCAATCAATGCAATAAAGCTTTTCCAACACCGACTGCACTTGCATGTCACATAAAAACTCATAGCAATGAAAAAAAGCACGAATGTGAAATTTGCAATAAACTTTTCAAAACAAAAGGAAGCCTTAAAACGCACATTGGAAATGTACATAAAGTCGATTTTAATGATGGTACGCCAAACTCATCACCACGTTATTGTTGTCAATTGTGTCCGAGAAATTTTATTTTTGAACGTGATCTCATTAAGCATTTAAAAACGCACGAACATAGGCGACACGTTTGTGAAATATGCAATCTATCCTACCTACAGTCTTCCCACTTGAAAAAGCATATGGACACAGTACATCTGAATATTAAGCCTCATGTATGTGCAATTTGTGGACATGCTTTTCCATTTGAATTTAATCTTAAACAACATGAACTAACGCATCAAGAAAAAGGATTTAAGTGCATTGTATGCGATAAAGCATTCACGCTGCTTCCTTCTCTGTTGTCACATCAGAGAACTCACACTGGCGAAAAACCTTACCAATGTCATATTTGTGAGAAAGCATTTACAAATAGAGGAAATCTTAAAAGTCATGTTGAGAAGCATTTGATAGAGCAAAAGCAAAATCAAACTTTTACACAAATTGTGCTACCAGTTATTCCTGCCTCTGGAGAAATCCCGCAACCATCAGAGCTCAATATATTTGATATAAACAACTCTTGCGAACCAGTGGAACAGCATGATTTTAGCAATCAAATAATCGAACAATGTGAACTAGAAACATTGAAATAA
- Protein Sequence
- MCSVFKLDLNKYCIEDVCRTCGRCDVITSASLVNIFTFDPQDVQKLNILRMFDLWKLNISEDDSLPQKMCKQCVGKFNLVHSFRKQCENIQSAFKILLAEQRRLKSAEKIAKESSKLEQLTKIQPKLEEQLPNNASTTFECFDEIPFEDGEFKSIQYFELEPHKPLESNSQIIKDQEKTETPTDLIDNSSDLFYGDDNGDGDIEDDWNAVAEDLVPKLELNNDDSSLDSDLLSSDDERKVNRKSKIKPNKFKCEFCKNFCLENQEDLDNHVKEIHSTDTPYTCSLCTKTFTNAKQRNCHFMVSHKWKSHECDVCHKMIKGGKPGLKNHKDNVHNKSDHECNICHKKFENISLSRFRYHLRWHDSSKLFSCKSCDKSFVTRYHLEEHERTHTDEKSFLCSICGLGLRCKQNLIWHMKTHTGERTYQCNQCNKAFPTPTALACHIKTHSNEKKHECEICNKLFKTKGSLKTHIGNVHKVDFNDGTPNSSPRYCCQLCPRNFIFERDLIKHLKTHEHRRHVCEICNLSYLQSSHLKKHMDTVHLNIKPHVCAICGHAFPFEFNLKQHELTHQEKGFKCIVCDKAFTLLPSLLSHQRTHTGEKPYQCHICEKAFTNRGNLKSHVEKHLIEQKQNQTFTQIVLPVIPASGEIPQPSELNIFDINNSCEPVEQHDFSNQIIEQCELETLK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00894292;
- 90% Identity
- iTF_00984500;
- 80% Identity
- -