Basic Information

Gene Symbol
egg
Assembly
GCA_026256485.1
Location
JAGTYB010000002.1:6385316-6399822[-]

Transcription Factor Domain

TF Family
MBD
Domain
MBD domain
PFAM
PF01429
TF Group
Unclassified Structure
Description
The Methyl-CpG binding domain (MBD) binds to DNA that contains one or more symmetrically methylated CpGs [2]. DNA methylation in animals is associated with alterations in chromatin structure and silencing of gene expression. MBD has negligible non-specific affinity for DNA. In vitro foot-printing with MeCP2 showed the MBD can protect a 12 nucleotide region surrounding a methyl CpG pair [2]. MBDs are found in several Methyl-CpG binding proteins and also DNA demethylase [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 2.7e-15 1.7e-11 44.4 0.1 5 75 1614 1677 1610 1679 0.89

Sequence Information

Coding Sequence
ATGGATGATATAAAAACTAAAAGTTTAAACGAAAAAGCAACTATTTCCAGTGCAATTGGTTCTCCAAAACACGAGGACGAGTGTAAACCATCGGGTGCTGCAAGTACTGACAATGGCAACAAAAAAACAGACACCGTCGATGATATAAATTCTGCGCAAGATAAACAAGATGCCGCCGCCGATTTAACCGAAGCATCGACAGATGGTGAAGATTTTTTATTGCGAGTAGAATCAAGTGATTTCGATAGTGAAACATTTGAAGATGCTGTTGATGGGGAAGCTATTGCTTCTAAAGAAAAAGTTGATGCTAAATCAGCAACTTCAAAGAAATCTGAGACATTATTCTCAGACATTGAAAGCTCCGATGATAGCATTGCTTATGAATCGCAAGAGAAATCAGATGTTAAATCTGTCGACAAGAAAACCACTTTAGCTCCAGTTTTGGAGAAAGATTTGTCTGAAGAAAAGAAAACAATTGAACCTGAGTTTGATCCCGTTGAATCGGATGAGGAATTTTTTGAAGATCCTCCATTGCCGGAGAGAATAGGACAACTTTCTCAAGAAAGTATATCCTCAAAGAGTTTGGAAGGAGAAGAAAGAAATTCGACTCCGTTGATTGATGAAGAAGTTGGTAAGTCGGAAGAACTTAATTTAGATACTGAAGAAAACACACGTGAATCTAATCCAGAACCAGATGAAAGTTTAGATTTACTGGTAGAAAGTTCAGTTGAATTAGAAGACACAATAGTGTCGGAGTCAATAGATTCTTCCAATTTGAATAATGAGATGAGCACTGAAATCGTAACAGGCAAAGTTTTGGAAGAAGAAGGGTCTGAAACTGTCGGTGATGAAAGGAATAGTCCGAATTCACCGAATTCCTTATTGCTTGAGGAGGAAAAAGAGAAATCTTCAAGAATTGAATCAGATTTACTGGAAAAAGTTATTGCCACCTCGGAAGCAAGCATTCTACCCAAAGTAGCTCCTAGAAGCCTTTCCCCGGATAAAAATATAGAGAAAAAAGAAACTCATGATGATTCTGAGACGACCACAACAAGTTCTACAATTCTCGAAGATAAAAACATTTCCTCGTCACCTCTCCCCGAAACAATAGAAACTGATATTGAGATGACAGAGGATTTAATCTTAAAAGATGATGAAAAAATCGAAGTAAATTACTCAATTGCTTCAGTGGAAGAACCAATGCAAATTGATGAAACAATTTTGGAAGTAAGTGATGCTTCAGAAATGGAAACAAATGAAGATGATATACAGATAGAAAAATATGACGAAATTTTAAATCAAGATGAATTACAAAAGTCAATCGAAAAAGAAATAGTCGAGGAACAAAAAATAATAGATGAGCCTTCTAAAGAAAATGAAAAAGTTTCGACTTCTGCAGAAAAGATTTCAGATGATGAGGAAGAATTTAATAAATCAATTGAAAAAGAACCAACAGAATCGTCTGAAATTAAAGTGAAAGAGTCCGAGGAAAATTCCGTGACTACAAAGCTCGATGAAGTAGTCGAAGAAGAAAACAAATCAGAAGAGAATTTAAAAGAAATAGAGTCTCATTGTGATTTAATTGAAGATCTTCCAATGATTGATTCCGAAGCAATAAGATCGGACGATGTTCTTGAAGCTTCGAAGAAACTAACTACTGATGATATAAAAGAAATTGAATCCACTGAAAAAGAAATTCTTGAAAAAGTCGATGAAGAAGTCACAGAATCGCTGGAAAAGTCAAATGATGGTGAGAAAACACAGATTGAAGCTTCTGATGAAACTGAAAAGTTACCAGAAATTACAACAGATTCCCTTGATGAACATAAAACAGCTGAAAAAATTACAGATTCCAATAAAACGTCCATAGAAATAGATGAGGAAGAAGCAGAAACTTCAAAGGTAACACAAAGTACAGTGCCTAATAAAACATCTCCGGAAGTCACGAAGAAGATATTGGAGACATCTGAGCAAGTAATCGAAAAAAAAGCAGAATCAACTGAAAAAATAGAATCTTCGAAAGAAATAGAAGAATCAGCCGGAAAGGCTGATTCTCCAAATTCAACAGAAAAGACAGAATCTCCAAAGAAATTAGTGAAAACATCAGAGGAAGAAAATAAACAACCAAGCGAGTCTGTTAAAGATCAAAAATCTTCCAAAGAAATTGTCAAAATTGTTGAGGAACCAACATCAGAGAAAGAAGAAGCTCCTCAACAAGTTGTTGATACATCAGAGAAACCAATTACACCAACAAACAAAGTAGGAACTGTAAGTGAAACAGTGGACTTAATTGATTTATCAGACGAAGAAACTCCAGCAAATGACACTGAAAAGTCTCCAAAATCAGTAGAAGAAGAAGAATCTAAAAAACATGATGAACCTAAAACGATCGAAGAACAAGCACTTCCCAGATCAAAAGAAACTACAGATTCTAAAGAACCGGAAAAAGTCAAGGTGACTGAAGAAGTTATTAGTTCGAATATTGAAACCTTGTCAGAAGACATAGAAATCCCCGAAGTCGCAACAGAAGTTCTTGTAGAAAAAGTTGTTGAAGTTGCAGCATCACTTGAAAGTTCAAAATCAAAGGAAGAAAATCAAGATGCAAATAAATCATCTTCAAATGAAGATCCTGAAATTATTGAAATTGATGATGACGATGATGATTCTCCCCCAGTAGAGAAAAAGTTAGAAGAAAGTTCAAACAAAGAAGAAACGATTACATCATCATCAACATCCGAGAAAGAATTAAGTGAAAAGAAAACCGAAAATGAAACAACAAAGACAACTGAAAGAAAAGAATCAAATGATGATGATATTCCCATGGAAATTGATGAAGAACTTACAAATCATCAACCATCTCAGATACCAGTAGAAAAACCACTAGAAGATAAATCTTCAGATCAAGATACCAACAAAGTTGAAGAATCTGCTGATGATTCAAAAAAGATCGATCAAGAAAATACTTCAGTTCAAGTTCTGGATGATGATGAAGAACCACTCCTAATGATTGATACTTCACACAAAGAAGACAACGACAATGAGAGTATCATGGACAATGAAACAGCCACATCAGCACCATCAACTGATTCGAGTAGTGAAGGTTCTTTGGAAATATTCTATGACAAAGAATGTGTCAACTATGAGTGCAAACGGGGAACTAAGAACTTTTATCGGGCAACAGTGTTTGCTCTGAATTATTTCAAAATATCAAAAAAGCGCACTAAGACACAGTTTGTTTGTGAGGATTGTTATGATCGAGCTTTAGGATCATATGAGGAATTGTGTAAAACTTTGAAGCAGAAACAGCCTCTTTTGCATGGAACTACGTTTAAAACTCAGGAATTTGTAGAAATTATTGATAGTAGTGACGAGGAAGAGAGTGATGCTGGAGGAGACAAAATTAAAGATGAAAACACTCTACCCAAGGAGAGCATTGAAATGCTTGAAGCTGAACTTGAAGGTGCAATTCGCAAAGTCATGCACAATGTTGACATTCAAAAACAACTCTCATGGACAAAGCAAATATTACAACAACGTCTTACGAATCTTCAAGAAGATTCCGATTTTGTTTCTGACCAGTTACGTGCCCTTCAAAGAAAAGCCGATCATATGCATAATTCTCTGTATCAGTGTCCAAAAATTAAACTTCGTCAATTGACACCTTTGGATTTGAACAGTGGTCGAATGTATAATCCAGAATCTGATAATGCCTCAAATATGCCACCGCCAGGAGAAATTGTTCGTACGCCAATTTGTGTGAATGAACAATATTATGCTGTAAAGACCAAAGCTATTGCTAGTTGGGTACCATGCAAAGTAATCGAAGAAGTTGAAGGTTATCCAAGTGGTTACAATCCAACGAAAACTTATAAAATTCGATTTACAAAACTTGCAAAGTATCCAATGTTTAAGACAGTTTATGCTAAACATATGGCATATTATGATCCGCCAAGTGTTAGATTGCCAATTGGATCTCGTGTAATTGCATATTTTGATGCGACTTCGCTGTCAAGAGGAAAAGAGAAAATGCTTATTCCAAGTGCATTTTATCCAGGTATTATTGCAGAACCACTTAAACAAAGCAATAAATTCAGATACTTGGTGTTCTATGATGATGGTTATTTCCAGTATGTAAATCACAAAGATGTACGTTTAGTTTGTCAAGCTTCGGAAAATGTATGGGAAGATGTACATCATCAATCTCGTGAATTTATTCACAATTATTTGACACAATATGCTGTAAATAGACCAATGGTACAAACTCAAAAAGGTCAGAGTATGTTGGTCGATTATAATGGCAAATGGATTTATGCTCGTGTCATTGATGTCGATTGTAGTTTGGTACAAATGTTGTTCGAGGGACAAAGTCGATCCGAATGGATATATCGTGGATCAACTCGTTTGGGACCTGTTTATAAGGAATCGAATAATCATCCACAAAAGAATACGCTTAATGCTACAAGAAGGCGCACAGAGCCCTTTATTCGCTACATTAACGGAGATGATTCATCATCATCACAACAAGCACAAGAATCCCAACAAGCCCAGCCGAAAGCTAGTGGAAGCAGTGAAATTCGTTCAGTTGCAAAGAAGAGTGTTAGTCGAGTTGATAATTCAAATAATAACAACAACACTCCCAGCAATAGCAATGCTGCACAACAACCTGTGCCAACGGTGCGTCATTTAAATAATTCAGTAATTTTTGTCGATGATGATAATAAACCTAAAGGAAAGGTTGTCTACTACACAGCAAGAAAGAATTTACCACCACGTGATTATGTTCCACATATATGCAATCCAGCTTGTCCGTTCAATATTACTCACAATCTAACATTCTATAGTCCTTTGGCTAAACCATTATTATCTGGGTGGGAACGACAAGTATTTAGACAAAAGTCAAAGAAGTTTATTGTCTATCGAGGACCATGTGGTAAACGAATGCGTAATATTGAAGAACTACACAGATATCTGCGAGTCACTGACAATGAATTGAATGTGGATAACTTTGATTTCAGTCCTGATACAAATTGTTTGGCTGAATATGTTCTCGAGAAATGCCTTGTTAACAAAAAGGACATCTCATGTGGCAAAGAGAAAATGCCGATTCCCTGCGTAAACTATTACGATGAATCCATGCCACCAGCATGTGAATATTCTGCCGTGCGAATTCCCACAGAAGGTGTCCCCTTGAATTTGGATGAAGAATTCTTATGCGGATGCGATTGTGAAGATGATTGTTCGGATAAAACAAAATGTGCTTGCTGGAAACTGACTTATGCTGGAGCTAAATACGGAATGCCTAGTGTCCCCACTGAAATGGTTGGCTATCAATACAAACGATTGTATGAACATGTACCAACGGGAATTTACGAGTGCAATTCAAGATGCAAATGCAAAGCAAATTGCGTGAATCGTGTTGTACAACAGCCTCTTCAATCAAAATTACAAGTCTTCAAGACATCAAACCGTGGTTGGGGTCTGCGGTGTATAAATGACGTACCTCGTGGTTCTTTCATTTGTGTCTATGCTGGTCAAATGCTGACAGAACAGGTGGCCAACGAAGGTGGTCTCGATGCTGGAGATGAATATTTTGCCGAGTTGGATTATATTGAAGTAGCTGAACAGATTAAGGAAGGCTATGAATCAGATGTTCATGAACCTGAAGAAGAAGAGGAACTTTATAATCCTGAAAGAGATGACGATGACACTGATTTCCGGGCTTCATTATCTTTTAAAGATAAAGAATTTAATACTCGTTTAAGAGCACGAAGAAGTAATAAAAACAGTACAGATGGTGAGTGTGAATCGCAAGAAAGACAAGTGATAAGCTTTGAACCGAACAAAAATATGGACACATCAACTGAACCCAATGAAAAACCAActattcgaaaattgtttggtaaagatgaaagttgttatgttatggatgccaaggtcagagggaatcttggaagatattttaatCATTCCTGCTCTCCAAATTTATTCGTGCAAAATGTTTTTGTTGATACTCATGACTTGAGATTCCCATGGGTGGCATTCTTTGCATCGACTCATATTAGAGCTGGCACAGAACTTACATGGAATTATAACTATGAAGTGGGCGTTGTACCCGGAAAAGTATTATATTGTCAATGTGGAGCGCCCAATTGTCGACAGCGTTTGCTTTAA
Protein Sequence
MDDIKTKSLNEKATISSAIGSPKHEDECKPSGAASTDNGNKKTDTVDDINSAQDKQDAAADLTEASTDGEDFLLRVESSDFDSETFEDAVDGEAIASKEKVDAKSATSKKSETLFSDIESSDDSIAYESQEKSDVKSVDKKTTLAPVLEKDLSEEKKTIEPEFDPVESDEEFFEDPPLPERIGQLSQESISSKSLEGEERNSTPLIDEEVGKSEELNLDTEENTRESNPEPDESLDLLVESSVELEDTIVSESIDSSNLNNEMSTEIVTGKVLEEEGSETVGDERNSPNSPNSLLLEEEKEKSSRIESDLLEKVIATSEASILPKVAPRSLSPDKNIEKKETHDDSETTTTSSTILEDKNISSSPLPETIETDIEMTEDLILKDDEKIEVNYSIASVEEPMQIDETILEVSDASEMETNEDDIQIEKYDEILNQDELQKSIEKEIVEEQKIIDEPSKENEKVSTSAEKISDDEEEFNKSIEKEPTESSEIKVKESEENSVTTKLDEVVEEENKSEENLKEIESHCDLIEDLPMIDSEAIRSDDVLEASKKLTTDDIKEIESTEKEILEKVDEEVTESLEKSNDGEKTQIEASDETEKLPEITTDSLDEHKTAEKITDSNKTSIEIDEEEAETSKVTQSTVPNKTSPEVTKKILETSEQVIEKKAESTEKIESSKEIEESAGKADSPNSTEKTESPKKLVKTSEEENKQPSESVKDQKSSKEIVKIVEEPTSEKEEAPQQVVDTSEKPITPTNKVGTVSETVDLIDLSDEETPANDTEKSPKSVEEEESKKHDEPKTIEEQALPRSKETTDSKEPEKVKVTEEVISSNIETLSEDIEIPEVATEVLVEKVVEVAASLESSKSKEENQDANKSSSNEDPEIIEIDDDDDDSPPVEKKLEESSNKEETITSSSTSEKELSEKKTENETTKTTERKESNDDDIPMEIDEELTNHQPSQIPVEKPLEDKSSDQDTNKVEESADDSKKIDQENTSVQVLDDDEEPLLMIDTSHKEDNDNESIMDNETATSAPSTDSSSEGSLEIFYDKECVNYECKRGTKNFYRATVFALNYFKISKKRTKTQFVCEDCYDRALGSYEELCKTLKQKQPLLHGTTFKTQEFVEIIDSSDEEESDAGGDKIKDENTLPKESIEMLEAELEGAIRKVMHNVDIQKQLSWTKQILQQRLTNLQEDSDFVSDQLRALQRKADHMHNSLYQCPKIKLRQLTPLDLNSGRMYNPESDNASNMPPPGEIVRTPICVNEQYYAVKTKAIASWVPCKVIEEVEGYPSGYNPTKTYKIRFTKLAKYPMFKTVYAKHMAYYDPPSVRLPIGSRVIAYFDATSLSRGKEKMLIPSAFYPGIIAEPLKQSNKFRYLVFYDDGYFQYVNHKDVRLVCQASENVWEDVHHQSREFIHNYLTQYAVNRPMVQTQKGQSMLVDYNGKWIYARVIDVDCSLVQMLFEGQSRSEWIYRGSTRLGPVYKESNNHPQKNTLNATRRRTEPFIRYINGDDSSSSQQAQESQQAQPKASGSSEIRSVAKKSVSRVDNSNNNNNTPSNSNAAQQPVPTVRHLNNSVIFVDDDNKPKGKVVYYTARKNLPPRDYVPHICNPACPFNITHNLTFYSPLAKPLLSGWERQVFRQKSKKFIVYRGPCGKRMRNIEELHRYLRVTDNELNVDNFDFSPDTNCLAEYVLEKCLVNKKDISCGKEKMPIPCVNYYDESMPPACEYSAVRIPTEGVPLNLDEEFLCGCDCEDDCSDKTKCACWKLTYAGAKYGMPSVPTEMVGYQYKRLYEHVPTGIYECNSRCKCKANCVNRVVQQPLQSKLQVFKTSNRGWGLRCINDVPRGSFICVYAGQMLTEQVANEGGLDAGDEYFAELDYIEVAEQIKEGYESDVHEPEEEEELYNPERDDDDTDFRASLSFKDKEFNTRLRARRSNKNSTDGECESQERQVISFEPNKNMDTSTEPNEKPTIRKLFGKDESCYVMDAKVRGNLGRYFNHSCSPNLFVQNVFVDTHDLRFPWVAFFASTHIRAGTELTWNYNYEVGVVPGKVLYCQCGAPNCRQRLL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-