Ebal024650.1
Basic Information
- Insect
- Episyrphus balteatus
- Gene Symbol
- -
- Assembly
- GCA_026256485.1
- Location
- JAGTYB010000302.1:217749-218204[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.3e-09 2.2e-06 28.1 0.0 17 43 1 27 1 30 0.86 2 2 0.22 3.8e+02 1.7 0.1 14 23 108 117 102 119 0.82
Sequence Information
- Coding Sequence
- ATGTCTATACGAAAAGCAGAAAAAGTGTTCGGCATTCCGGCTAGAACACTTTCGAGGCGTATAAAAGAAGGAAATTTTATGAAAAAACCTTTAGGATTTATGGGTGTTCTTGGAATTCAAAACGAGAAGAAGTTTGCTGCGCATGTCAAAAAATTAGCTTCGGCAGGTTTTGCTACTGATAGAGAAGGCATTCGATGTTTGGCGTTCGACCTTGCGGAAAAAATGGGTATCAAGCACAAATTCAACACAGAAACTAAAAAAGCAGGTTATGCTTGGTTGGCATCCTTTTTGGAAAGAAATAAAGACATTTCGTTGAGACAGTCTGAGGGACTTTCTCTCTCCCGTGCCCAGGGTATGAATCGTTCAGCAGCGAATGACTTTTTTTAA
- Protein Sequence
- MSIRKAEKVFGIPARTLSRRIKEGNFMKKPLGFMGVLGIQNEKKFAAHVKKLASAGFATDREGIRCLAFDLAEKMGIKHKFNTETKKAGYAWLASFLERNKDISLRQSEGLSLSRAQGMNRSAANDFF
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00240592;
- 90% Identity
- -
- 80% Identity
- -