Basic Information

Insect: Epistrophella euchroma
Gene Symbol: wdn
Assembly: GCA_947049305.1
Location: CAMRIP010000161.1:156912-159254[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 8 0.02 2.5 9.5 0.5 1 23 190 212 190 212 0.97

2 8 8.7e-07 0.00011 23.3 0.4 2 23 217 238 216 238 0.97

3 8 0.039 4.8 8.6 1.8 2 23 249 269 248 269 0.93

4 8 1.7e-06 0.00022 22.3 1.0 3 23 277 297 275 297 0.98

5 8 6.9e-06 0.00086 20.4 3.0 1 23 303 325 303 325 0.98

6 8 0.0002 0.025 15.8 3.2 1 23 331 353 331 353 0.96

7 8 8.1e-06 0.001 20.2 1.1 1 23 359 381 359 381 0.96

8 8 0.00025 0.031 15.5 3.3 1 23 387 410 387 410 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	8	0.02	2.5	9.5	0.5	1	23	190	212	190	212	0.97
2	8	8.7e-07	0.00011	23.3	0.4	2	23	217	238	216	238	0.97
3	8	0.039	4.8	8.6	1.8	2	23	249	269	248	269	0.93
4	8	1.7e-06	0.00022	22.3	1.0	3	23	277	297	275	297	0.98
5	8	6.9e-06	0.00086	20.4	3.0	1	23	303	325	303	325	0.98
6	8	0.0002	0.025	15.8	3.2	1	23	331	353	331	353	0.96
7	8	8.1e-06	0.001	20.2	1.1	1	23	359	381	359	381	0.96
8	8	0.00025	0.031	15.5	3.3	1	23	387	410	387	410	0.98

Sequence Information

Coding Sequence: atgaaagaagaggGCCTTCCAAGTAAACCCACGTCCTCCTTTCCCAACAACGATGAGATATTAACGTCGCTCTTGAAgatcaataattttgataacaGCATCAAAGATGAGTCGCTAGACATCAATCTGTCGGCATGTGTCACTATATCCGCCGATCCGACGATCATCTGTAATAATAGTCTTTCGTCAGACTTCTGGAAGGTCTTCGACGAAAGTGCCCAAGCTGATGAGAGCAGCAGTGCCATTGCAAATCGATCTACATCAGCGGTGGAGAACATCAATTTCAAAAGCCTACTTCCTCCGCCGCCACTTGTGGATGTTAGCAAAGTTCTAACTGGATGGTGGACTGATATGCCTTCTCCTATTTTACCATCTCCcacaaaaatgaaacacaaaAGTCGGAAACAGACCAAGCAAACACAAAAACCCGACCAGGCAAATGCGCAAAGACGAACCGAAAATGCACAAACGATTGCAAAAGACCACCTTCCGATCTCAAATAGTTTTAAGGGTACTTTTCCTATTGGTGCAAATAAGCCAGATACTTCCATACCAAccgaaaacaaattcaaatgtgAACACTGTCGAGTTGTGTTGAATGGGCCGGAGGAGTTCACCAAACACGAAGCTTCCCACAAGATTCTTATCAAATGCAACGAATGTGATCGCGAATTCGCCAACGAGAGTGGCTTGAAGAAACACATTAAAAGTCATCGGGACGACTCTAGGAAGGATGGCTGGAAAAAGTGTCCGGATTGTGGCAAGTGtttaaaacttGGAAGCATGTGGATGCACAGGAAAATCCATAGTGATAATAAAAAATACGGCTGTGATATATGTGgccaaaaatttgttcaaaaaattaatcttaccCATCATCAGAGAGTACATACAGCAGAAAAGCCATACGAATGTGCTGAATGTCCAAAAAGatttcaAGAACGATCTCATTTGCAACGTCATCAAAAATATCATGCTCAAACCCGTCCGTTTAGATGTGAAAAATGcggtaaaatgtataaaaccgAACGTTGCCTCAAAGTCCATAACCTTGTACATCTGGAACAGCGTCCCTTTGCCTGTCAAGTATGCAACAAAAGTTTCATTAGCAACTCTAAGTTAAAGCAACATTCAAATATTCACACTGGCGAACGTccatttaaatgcaattattgtaCCAGAGATTTTACGAATTTTCCCAATTGGTTGAAGCACACCCGTAGACGCCACAAAGTCGATCATAAAACTGGAGAGCTTTTAGAACACATGCCTTCTTATTGCACAAAATCAGGAAAGAAATCTAAAGCAGCAACTGGTGGTGATGTCGAGGGAAAGCCAACtaggaagaagaagaaaaccGAGACGGAGCAGAACAAAACATTAACGACTACATCACAGCCACAACCACCactaccaccaccaccaccacagCAACCGCTACCAAAATCTCCGCAAGCACCTCCCTCCGtccagattttgaaaacaaaaattaaactggaacCCGACCACGAACCTGATGATGTTCACAACAATACTCATTTCACAGATTTACACTCTCTAAGCATAACCAGTGCCGAGGAATTGATCATGGAACAAGCCCTCGAAATGGAAGAATTTTGTTTCTACAAATCGCAGCTGGACCAGTTCAGTATGCACAAAGAATTTTCTGTGAAGCAGGAATTTGATAACAAAGCTTTGTGCTCAGTAGACTCCTCGCCTTTTTCTTCGCCAGCTTCGGTCGAACTTCCTATTACGTACAACATCCAGTCTCTTCCATCTACTACAATATCAACAGCAGGAAGAAATACATCATCTGAATCTGCAACATCCAACACAATGCGCATTCAAGTTTTCAAGAATCAAACACTTCCGTCCGTTGATACTTTAATTAATGCATGCTTCTTTAAGagtgaaaatcaaaatatgtaa
Protein Sequence: MKEEGLPSKPTSSFPNNDEILTSLLKINNFDNSIKDESLDINLSACVTISADPTIICNNSLSSDFWKVFDESAQADESSSAIANRSTSAVENINFKSLLPPPPLVDVSKVLTGWWTDMPSPILPSPTKMKHKSRKQTKQTQKPDQANAQRRTENAQTIAKDHLPISNSFKGTFPIGANKPDTSIPTENKFKCEHCRVVLNGPEEFTKHEASHKILIKCNECDREFANESGLKKHIKSHRDDSRKDGWKKCPDCGKCLKLGSMWMHRKIHSDNKKYGCDICGQKFVQKINLTHHQRVHTAEKPYECAECPKRFQERSHLQRHQKYHAQTRPFRCEKCGKMYKTERCLKVHNLVHLEQRPFACQVCNKSFISNSKLKQHSNIHTGERPFKCNYCTRDFTNFPNWLKHTRRRHKVDHKTGELLEHMPSYCTKSGKKSKAATGGDVEGKPTRKKKKTETEQNKTLTTTSQPQPPLPPPPPQQPLPKSPQAPPSVQILKTKIKLEPDHEPDDVHNNTHFTDLHSLSITSAEELIMEQALEMEEFCFYKSQLDQFSMHKEFSVKQEFDNKALCSVDSSPFSSPASVELPITYNIQSLPSTTISTAGRNTSSESATSNTMRIQVFKNQTLPSVDTLINACFFKSENQNM

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00975035;
90% Identity: iTF_00894241;
80% Identity: -