Basic Information

Insect: Epistrophella euchroma
Gene Symbol: grau
Assembly: GCA_947049305.1
Location: CAMRIP010000157.1:2092284-2100080[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 0.1 13 7.3 0.3 2 23 267 289 266 289 0.95

2 18 0.21 26 6.3 1.0 6 23 298 315 298 315 0.99

3 18 6.5e-05 0.0081 17.4 0.2 1 23 321 343 321 343 0.99

4 18 2.5e-05 0.0031 18.7 2.1 1 23 351 373 351 373 0.99

5 18 6.6e-05 0.0082 17.4 0.3 2 23 380 402 379 402 0.95

6 18 1.4e-06 0.00017 22.6 0.5 3 23 410 430 409 430 0.96

7 18 0.00049 0.061 14.6 0.4 2 23 439 461 438 461 0.95

8 18 0.00024 0.03 15.6 0.1 1 23 468 491 468 491 0.94

9 18 0.0053 0.66 11.4 0.3 1 16 497 512 497 513 0.87

10 18 0.32 39 5.8 3.7 2 21 753 772 752 775 0.94

11 18 2.9e-05 0.0036 18.5 1.0 1 23 807 829 807 829 0.98

12 18 1.5e-05 0.0019 19.3 3.8 1 23 837 859 837 859 0.98

13 18 3.9e-06 0.00049 21.2 0.3 1 23 867 890 867 890 0.96

14 18 0.0036 0.44 11.9 0.2 3 23 898 918 897 918 0.96

15 18 8.7e-05 0.011 17.0 0.4 2 23 927 949 926 949 0.95

16 18 0.00073 0.091 14.1 0.1 1 23 956 979 956 979 0.92

17 18 1.1e-06 0.00013 23.0 0.9 1 23 985 1007 985 1007 0.98

18 18 2.6e-05 0.0032 18.6 5.0 1 23 1013 1036 1013 1036 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	0.1	13	7.3	0.3	2	23	267	289	266	289	0.95
2	18	0.21	26	6.3	1.0	6	23	298	315	298	315	0.99
3	18	6.5e-05	0.0081	17.4	0.2	1	23	321	343	321	343	0.99
4	18	2.5e-05	0.0031	18.7	2.1	1	23	351	373	351	373	0.99
5	18	6.6e-05	0.0082	17.4	0.3	2	23	380	402	379	402	0.95
6	18	1.4e-06	0.00017	22.6	0.5	3	23	410	430	409	430	0.96
7	18	0.00049	0.061	14.6	0.4	2	23	439	461	438	461	0.95
8	18	0.00024	0.03	15.6	0.1	1	23	468	491	468	491	0.94
9	18	0.0053	0.66	11.4	0.3	1	16	497	512	497	513	0.87
10	18	0.32	39	5.8	3.7	2	21	753	772	752	775	0.94
11	18	2.9e-05	0.0036	18.5	1.0	1	23	807	829	807	829	0.98
12	18	1.5e-05	0.0019	19.3	3.8	1	23	837	859	837	859	0.98
13	18	3.9e-06	0.00049	21.2	0.3	1	23	867	890	867	890	0.96
14	18	0.0036	0.44	11.9	0.2	3	23	898	918	897	918	0.96
15	18	8.7e-05	0.011	17.0	0.4	2	23	927	949	926	949	0.95
16	18	0.00073	0.091	14.1	0.1	1	23	956	979	956	979	0.92
17	18	1.1e-06	0.00013	23.0	0.9	1	23	985	1007	985	1007	0.98
18	18	2.6e-05	0.0032	18.6	5.0	1	23	1013	1036	1013	1036	0.98

Sequence Information

Coding Sequence: ATGGAAGAATCTTTATGTGTGTTGTGTGTATCAAATGCAAAAGCTgttataaatatatttgaagAAGAGGGGGCGGCCCTCAACATAAATGAAATTATCGTAAAACATTTTTGGCTTCagCCAAATGCAAACGATCCAAATGCAAAAGTCATATGTACATCTTGCTGGGCGGAATTGAGTTCCTTTCATGAATTCTATGTGCAAGTTGAAGAAGCCCATGACAATCAGATAAAAGTCATCGAGATTAATGAGGATTTAAAGTTGGAGAATGTTTTGAATCAATTGGCTCAACGAAATGTTACATCTGATGAAGGAGTTGCATCGGAATTTCTGGATTCAGATATTAAACTAGAAGTTAAAGAAGATGCTGAAGTTCGTCTGAATGCGGATGATTGTCATACTGTAGAGGGTAAAACTGTCTCGGTTAATTTAGAAGATCCACCTGCTAGCTCTACAAGAAGTCGTAAGTCTGTAGAGAAGTCTCAAGGTCACAATGATTCTTCCAGTGAAGATGACAGAAGCTTTGACAATGTCGAAGTTGACCGTTGCGATTCGACCGATTGGCAAAACGAGGAAGATAACTCGGACAACACTGAAGAAGACAGTGATTATGAGGATAGCACAACGAAAGCAAAAAATTCAAGGGAACCCTCAAAGGAGACCAAAAAGCGTGGTCGACCAAGAAAAGGTGAGTCCAGAGCACCTCCTTGTAAAAAACCACGAAATTCAGGGGAGCAAAATTTGAAACGAAAGCGCATGCAAGAGTTTGATGAAATAATTGCTAAAAACATGAAGCTTTCGTGTGCCATGTGTCAGAATATATTTGCTAACTTTGCCGTGCTCAAGAGACACTTTAGATCTGAACACAACGAATGTGGATATGTGGTTTGCTGTACAAAAAAGTTTCGCAAACGTGGTGTTCTCGTGGATCATATATGTACTCATCAAAATCCAGAGTACTTCAAATGCGAACAATGTGGAAGGGTATTGGCCAATAGAAAAGGACTGGACAGTCACATGCTAACTCATGATACAGAAAAACAACGAATATACCAATGCGATCAATGTACGTTTAGTTTCTACACGAGGCCATTGTTGACACGTCACTTGCAAACGCACATTTCCGAACGCAATATAAAGTGTCCCGACTGTGACAAATTCTTCTCAACACAAGACATCTTACGCACTCATGTGAATAACGTTCACAATGCCGCATACACGAGGATTTGCGATCAGTGTGGAAAATCTTTCCGCCGGCCGGATGCTTTTCGACGGCATCAATTGGAACATGATGGCATAACACAGCCAATGGTACCTTGCGAAAAATGCAATGTTAAATTAACAAGCAAATATGGATTGAAAAGGCACATGGAATCAATGCATCCGGAACAAGACATCAAGCACATATGTAATGAGTGTGGAAAAGTTGCTCCAAGTGCTGCTGCATTGCAACGGCATATTTCCTATATGCACAAAATGGAACGTAAATACAAGTGTCCCATGTGTGATAAAGCATTTAAAAAGACTGGTGGACTTAAGcCAAATGAAAGCGATGAAAATGCAAGATACATTTGCGGATCCTGCTGGAATGCCTTGTATTCATTTCACAAATTCTACAAACAAGTTGAAGAGGCGCACTTGACTTTGCTAACAGCAACTGCTAGCCCTGAGGAGGACTTGAAGCCAGATGATCAGATTGCCGTAGAGGTAGAAGTTCGATTGATAGATAAATATGATTCCAATGGGGATTATTCAAATACAGCTGTTAAGTTGGAGGTTAAGGAGGATGGAGAGATTTGTCTGCCAATAATTGAACATACTCCCGAAATCGACTTAAAACTTGACCACAAAATcgaacaacaacagcagcaacattCAGTTATTGATTCAAGTGACACCGACGACTCTGAGATTCCTCTTGTTAACTTTACAAAAactcaatcgaaaaagaaaatcagaACAAAAGCAAACACAACAACGTCCAGTAATGATGATCAGGAATCATCCGCAGAGTGGCAAGACCCTAATCATTCACATGACGATTGTGATTTTGATGTTGATGACGAAGAAGACAGCGATTTTGAAGTAAAGCAAAGAACAACACCTATACGAAAATTACAAACTGGAAAGAAACGCGGTCGACCTCTCAAAGGCACTCCCAGAGATTCAACTCGAAAACAAATTACTGAAGAACAAATTAAAAAGCAACAACTCTCACATGAGTACGACGACATCATACAAAAGCACATGAAGCTAACGTGTAATATTTGTCAGTTAGCTTTGACAAACTTCTTTACACTAAAGAAGCACTATCGTTGCAAGCACAACGAGCGAGGATATGCTTTTTGTTGCAGCAAGAAATTCCTTAAACGTGGAGTGCTAGTTGATCACATTTACACGCACTTGAATCCCGAACATTTCAAGTGTGACAAATGTGACAAGGTTTTGGCTGATCGGCGATGCTTGGAGGTTCACATGAATATTCATAGTGAGGAAAAACAACGCATCTATCAGTGTGATCAGTGCAACAAGAGTTTCTTCAAGAAACCCCTGCTGACGCGTCACATGCATATTCACATACCTCAGGAGGAGCGAAAGTTTCCCTGTGAAGAATGCAATAAGTTCTTTCCATCGAATTACACTCTGCGTGCACATATAAACAACGTGCATCAGAACGCATATGCCAAAATCTGCGATCAGTGTGGCAAGTCGATACGTGGACGGGAAGCATTCCAAAGGCATTTGCTGGAACATGCTGGGGTTGCTATACCTAGTGTACAATGTGACAAGTGTGGAGCGAAACTCAAGAACAAATATGGCCTCAAGAGACACATGAATGCAATGCATACCGATTCGACTGTGCCTCATGTGTGTAATATTTGTGGAAAAGTAGCACCAAATGCGCCTGCACTACAAAGACATTACTATTACGTGCACAAGTGTGAGCGTAGTCACAAGTGTCCGATGTGTGATAAGGCCTTTAAAAAGGCAGCAGGATTGAAGGAACACATGACAACTCATACTGGAGAAGTTCTTTACACATGCCCACATTGTCCtaaaacatttaattcaaaCGCTAACATGCATTCCCATCGTAAAAAAATGCATCGCAAAGAATGGGAGGAAAATCGAAGGCACCCTCACATGGGAGCGAGTGCAAATGTGAATGCAACTGCAAATGTCACCGAGGAGAATAATCAGCAGCAGTAA
Protein Sequence: MEESLCVLCVSNAKAVINIFEEEGAALNINEIIVKHFWLQPNANDPNAKVICTSCWAELSSFHEFYVQVEEAHDNQIKVIEINEDLKLENVLNQLAQRNVTSDEGVASEFLDSDIKLEVKEDAEVRLNADDCHTVEGKTVSVNLEDPPASSTRSRKSVEKSQGHNDSSSEDDRSFDNVEVDRCDSTDWQNEEDNSDNTEEDSDYEDSTTKAKNSREPSKETKKRGRPRKGESRAPPCKKPRNSGEQNLKRKRMQEFDEIIAKNMKLSCAMCQNIFANFAVLKRHFRSEHNECGYVVCCTKKFRKRGVLVDHICTHQNPEYFKCEQCGRVLANRKGLDSHMLTHDTEKQRIYQCDQCTFSFYTRPLLTRHLQTHISERNIKCPDCDKFFSTQDILRTHVNNVHNAAYTRICDQCGKSFRRPDAFRRHQLEHDGITQPMVPCEKCNVKLTSKYGLKRHMESMHPEQDIKHICNECGKVAPSAAALQRHISYMHKMERKYKCPMCDKAFKKTGGLKPNESDENARYICGSCWNALYSFHKFYKQVEEAHLTLLTATASPEEDLKPDDQIAVEVEVRLIDKYDSNGDYSNTAVKLEVKEDGEICLPIIEHTPEIDLKLDHKIEQQQQQHSVIDSSDTDDSEIPLVNFTKTQSKKKIRTKANTTTSSNDDQESSAEWQDPNHSHDDCDFDVDDEEDSDFEVKQRTTPIRKLQTGKKRGRPLKGTPRDSTRKQITEEQIKKQQLSHEYDDIIQKHMKLTCNICQLALTNFFTLKKHYRCKHNERGYAFCCSKKFLKRGVLVDHIYTHLNPEHFKCDKCDKVLADRRCLEVHMNIHSEEKQRIYQCDQCNKSFFKKPLLTRHMHIHIPQEERKFPCEECNKFFPSNYTLRAHINNVHQNAYAKICDQCGKSIRGREAFQRHLLEHAGVAIPSVQCDKCGAKLKNKYGLKRHMNAMHTDSTVPHVCNICGKVAPNAPALQRHYYYVHKCERSHKCPMCDKAFKKAAGLKEHMTTHTGEVLYTCPHCPKTFNSNANMHSHRKKMHRKEWEENRRHPHMGASANVNATANVTEENNQQQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00335285;
90% Identity: -
80% Identity: -