Basic Information

Insect: Chrysotoxum festivum
Gene Symbol: grau
Assembly: GCA_963931855.1
Location: OZ007554.1:214482690-214495034[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 0.012 3.1 10.2 0.3 2 23 275 297 274 297 0.95

2 18 0.18 48 6.4 1.0 6 23 306 323 306 323 0.99

3 18 5.7e-05 0.015 17.5 0.2 1 23 329 351 329 351 0.99

4 18 2.2e-05 0.0057 18.8 2.1 1 23 359 381 359 381 0.99

5 18 5.7e-05 0.015 17.5 0.3 2 23 388 410 387 410 0.95

6 18 1.3e-06 0.00035 22.6 0.9 3 23 418 438 417 438 0.96

7 18 0.00043 0.11 14.7 0.4 2 23 447 469 446 469 0.95

8 18 0.00021 0.054 15.7 0.1 1 23 476 499 476 499 0.94

9 18 0.00083 0.22 13.8 0.2 1 17 505 521 505 522 0.93

10 18 0.28 72 5.9 3.7 2 21 681 700 680 703 0.94

11 18 2.5e-05 0.0067 18.6 1.0 1 23 735 757 735 757 0.98

12 18 1.3e-05 0.0035 19.5 3.8 1 23 765 787 765 787 0.98

13 18 1.1e-05 0.0029 19.7 1.7 1 23 795 818 795 818 0.96

14 18 0.0031 0.81 12.0 0.2 3 23 826 846 825 846 0.96

15 18 7.6e-05 0.02 17.1 0.4 2 23 855 877 854 877 0.95

16 18 0.00064 0.17 14.2 0.1 1 23 884 907 884 907 0.92

17 18 9.3e-07 0.00024 23.1 0.9 1 23 913 935 913 935 0.98

18 18 2.3e-05 0.006 18.7 5.0 1 23 941 964 941 964 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	0.012	3.1	10.2	0.3	2	23	275	297	274	297	0.95
2	18	0.18	48	6.4	1.0	6	23	306	323	306	323	0.99
3	18	5.7e-05	0.015	17.5	0.2	1	23	329	351	329	351	0.99
4	18	2.2e-05	0.0057	18.8	2.1	1	23	359	381	359	381	0.99
5	18	5.7e-05	0.015	17.5	0.3	2	23	388	410	387	410	0.95
6	18	1.3e-06	0.00035	22.6	0.9	3	23	418	438	417	438	0.96
7	18	0.00043	0.11	14.7	0.4	2	23	447	469	446	469	0.95
8	18	0.00021	0.054	15.7	0.1	1	23	476	499	476	499	0.94
9	18	0.00083	0.22	13.8	0.2	1	17	505	521	505	522	0.93
10	18	0.28	72	5.9	3.7	2	21	681	700	680	703	0.94
11	18	2.5e-05	0.0067	18.6	1.0	1	23	735	757	735	757	0.98
12	18	1.3e-05	0.0035	19.5	3.8	1	23	765	787	765	787	0.98
13	18	1.1e-05	0.0029	19.7	1.7	1	23	795	818	795	818	0.96
14	18	0.0031	0.81	12.0	0.2	3	23	826	846	825	846	0.96
15	18	7.6e-05	0.02	17.1	0.4	2	23	855	877	854	877	0.95
16	18	0.00064	0.17	14.2	0.1	1	23	884	907	884	907	0.92
17	18	9.3e-07	0.00024	23.1	0.9	1	23	913	935	913	935	0.98
18	18	2.3e-05	0.006	18.7	5.0	1	23	941	964	941	964	0.98

Sequence Information

Coding Sequence: ATGGAAGAAACGTTATGTGTATTGTGTATGTCAAATGCAGAAACTGCCATAAATATATTTGAAGAAGAGGGGACGGCCCTCAACATTAATGAAATTATAGTTAAACATTTTTGGCTTCAGCCAGATGCGAACGATCCAAATTCAAAAGTCATATGCACATCATGCTGGGCTGAATTGAGTTCCTTCCATGAATTCTATGTACAAGTTGAAGAAGCCCATGTCAATCAGCtaaaagtcattgaaaatgaTGATGAGTTAAAGTTAGAGAATGTTTTTACTCACTTGGCACAACAAAATGTTGCTCCTAATGAAGCAATAGCATCGGAATTTCTGGATTCAGATATTAAAGTAGAAGTCAAAGAAGATGCTGATGTTCGACTGAATGCGGATAGTTATCATACTGCAGAAAATAATGAGAGTCAAACTCCTTTCGTAGAATCGCATTCGGTTAATTTAGAAGCTCCACCTGCTAGCTCTACCAGAAGTCGTAAACCTGTAGAGAAATCGCATACCAAAACTGATTCATCTAGTGAAGATGAGAAAAGCTTTGGCAATATCGAAGCTGACCGATGCGGTTCACCAGATTGGCAAAATGAGGAAGATAACTCAGACAACACCGAAGAAGATAGTGACTATGAGGACAgcacaacaaaagcaaaaaaggCGAGAGAACCTTCGAAGGAAACAAAAAAGCGTGGTCGACCGAGAAAGGGTGAATCTAGGGCTCCTCCATGTAAGAAACCGCGAAACTCGggggaacaaaatttaaaaagaaaacgcaTGCAAGAATTTGATGAGATAATTGCTAAAAATATGAAGCTTTCATGTGCCATGTGTcagaatatttttgttaactttgCCGCTCTCAAGAGACACTTTCGATCGGAACACAACGAATGTGGATATGTTGTATGTTGTACTAAAAAGTTTCGCAAACGCGGGGTTCTCGTGGATCACATCTGCACTCATCAAAATCCGGAATATTTTAAGTGTGAACAGTGTGGAAGGGTGTTGGCCAACAGAAAAGGGCTTGACAGTCACATGCTTACTCATGATACAGAAAAGCAACGAATATATCAATGCGATCAATGTACGTTTAGTTTTTACACCAGGCCACTGTTAACTCGTCACCTGCAAACGCACATTTCCGAACGCAACATCAAGTGCCCTGATTGTGACAAATTTTTCTCAACACAGGACATCTTGCGCACTCATGTGAATAATGTTCACAATGCCGCATACACGAGAATCTGTGATCAGTGTGGAAAATCTTTCCGCCGGCCGGATACATTTCGACGCCATCAGTTAGAACACGATGGAATTACACAACCAATGGTTCCTTGTGAAAAATGCAACGTTAAATTAACAAGCAAATACGGATTGAAGAGGCACATGGAATCCATGCATCCCGAACAAGATATCAAGCATATATGTAATGAGTGTGGAAAGGTTGCACCAAGTGCTGCTGCATTGCAACGGCACATTTCCTATATGCACAAAATGGAACGTAAATACAAGTGTCCTATGTGCGATAAAGCATTTAAAAAGTCTGGCGGGCTAAAGGTGGAGGTTAAAGAAGACGGAGAAATAAGCTTGCCATCATTAATCGAACATACTCCCGACATCGAACTAAAAATTGACGATCAAGAGATCGAACATCTGCAACACTCAATTATTGATTCAAGTGACACCGATGACTCAGAGATTCCACTTGCTAACCTTACAAAAACTCACTCGAAAAAGAATCGTAGAATAAAAGCAAAAACAGAAATATCTAGTAATGATGATCAGGAATCATCAGCAGAGTGGCAAGACAACAATCATGCACATGACGATGGTGATGACGACGAAGAAGACAGTGATTTTGAAGTGAAACAAAAAGTAACACCCACACGAAAACCGCAGACTAGCAAAAAACGCGGCCGACCTCTCAAAGGTACTCCCAAAGATGCAAATCCGAAACAAATTACagaagaacaaataaaaaagcaaaaactttCACATGAGTATGACGACATAATACAAAAGCACATGAAACTAACGTGTAACATTTGTCAGCTAGCTTTGACAAATTTCTTTACATTAAAGAAGCATTATCGTTGCAAGCACAACGAGCGAGGATATGCTTTTTGTTGCAGCAAGAAATTCCTTAAACGGGGTGTCCTCGTTGATCACATTTACACTCACTTGAATCCAGAACATTTCAAGTGCGACAAATGTGATAAGGTTCTTGCTGATCGGCGCTGCTTGGAAGTTCACATGAATATACACAGTGAGGAGAAGCAACGCATCTACCAATGTGATCAGTGCAACAAGAGTTTCTTCAAGAAGCCCCTGCTAACTCGTCACATGCACATTCACATACCTCAGGAGGAGCGAAAGTTTCACTGCGAAGAATGCAATAAGTTCTTTCCATCAAATTACACTCTGCGTGCACACATCAACAACGTGCACCAGAATGCATATGCCAAAATCTGCGATCAGTGTGGCAAGTCGATACGCGGAAGGGAAGCATTCCAAAGGCATTTACTGGAGCACGCTGGTGTTCCTATACCCAGTGTACAATGTGACAAGTGTGGAGCAAAACTCAAGAACAAATATGGCCTCAAGAGACACATGAATGCAATGCATGCCGATTCGAGTGTGCCTCATGTGTGTAATATTTGTGGTAAAGTAGCACCAAATGCCCCTGCGCTACAAAGGCATTACTACTATGTTCACAAGTGTGAGCGTATCCACAAGTGTCCCATGTGTGATAAGGCCTTTAAAAAGGCTGCAGGATTGAAGGAGCACATGACAACTCATACTGGAGAAGTTCTTTACACATGTCCACATTGTCcaaaaacatttaattcaaACGCAAACATGCATTCCCATCGTAAAAAAATGCATCGCAAAGAATGGGAAGAAAATCGAAGGCATCCTCACATGGGAGCCAGTGCTAATGCAAATGTCACCGAGGAGAACAACCAACAGTAG
Protein Sequence: MEETLCVLCMSNAETAINIFEEEGTALNINEIIVKHFWLQPDANDPNSKVICTSCWAELSSFHEFYVQVEEAHVNQLKVIENDDELKLENVFTHLAQQNVAPNEAIASEFLDSDIKVEVKEDADVRLNADSYHTAENNESQTPFVESHSVNLEAPPASSTRSRKPVEKSHTKTDSSSEDEKSFGNIEADRCGSPDWQNEEDNSDNTEEDSDYEDSTTKAKKAREPSKETKKRGRPRKGESRAPPCKKPRNSGEQNLKRKRMQEFDEIIAKNMKLSCAMCQNIFVNFAALKRHFRSEHNECGYVVCCTKKFRKRGVLVDHICTHQNPEYFKCEQCGRVLANRKGLDSHMLTHDTEKQRIYQCDQCTFSFYTRPLLTRHLQTHISERNIKCPDCDKFFSTQDILRTHVNNVHNAAYTRICDQCGKSFRRPDTFRRHQLEHDGITQPMVPCEKCNVKLTSKYGLKRHMESMHPEQDIKHICNECGKVAPSAAALQRHISYMHKMERKYKCPMCDKAFKKSGGLKVEVKEDGEISLPSLIEHTPDIELKIDDQEIEHLQHSIIDSSDTDDSEIPLANLTKTHSKKNRRIKAKTEISSNDDQESSAEWQDNNHAHDDGDDDEEDSDFEVKQKVTPTRKPQTSKKRGRPLKGTPKDANPKQITEEQIKKQKLSHEYDDIIQKHMKLTCNICQLALTNFFTLKKHYRCKHNERGYAFCCSKKFLKRGVLVDHIYTHLNPEHFKCDKCDKVLADRRCLEVHMNIHSEEKQRIYQCDQCNKSFFKKPLLTRHMHIHIPQEERKFHCEECNKFFPSNYTLRAHINNVHQNAYAKICDQCGKSIRGREAFQRHLLEHAGVPIPSVQCDKCGAKLKNKYGLKRHMNAMHADSSVPHVCNICGKVAPNAPALQRHYYYVHKCERIHKCPMCDKAFKKAAGLKEHMTTHTGEVLYTCPHCPKTFNSNANMHSHRKKMHRKEWEENRRHPHMGASANANVTEENNQQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00665046;
90% Identity: -
80% Identity: -