Basic Information

Insect: Epistrophella euchroma
Gene Symbol: -
Assembly: GCA_947049305.1
Location: CAMRIP010000273.1:933060-946059[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 4.6e-05 0.0057 17.8 2.1 1 23 429 451 429 451 0.96

2 18 1.2e-05 0.0015 19.7 0.4 1 23 457 479 457 479 0.97

3 18 2.3e-05 0.0028 18.8 0.5 1 23 485 507 485 507 0.98

4 18 1.9e-05 0.0024 19.0 3.1 1 23 513 535 513 535 0.97

5 18 4.4e-05 0.0055 17.9 4.7 1 23 541 563 541 563 0.99

6 18 8.1e-05 0.01 17.1 5.7 1 23 569 591 569 591 0.97

7 18 2.2e-07 2.8e-05 25.1 4.3 1 23 597 619 597 619 0.98

8 18 1.4e-07 1.8e-05 25.7 2.4 1 23 625 647 625 647 0.97

9 18 0.00019 0.024 15.9 5.7 1 23 653 675 653 675 0.97

10 18 2.4e-05 0.0029 18.7 6.5 1 23 681 703 681 703 0.98

11 18 4e-06 0.0005 21.2 4.5 1 23 709 731 709 731 0.98

12 18 9.3e-06 0.0012 20.0 8.1 1 23 737 759 737 759 0.98

13 18 2.3e-06 0.00028 22.0 7.9 1 23 765 787 765 787 0.98

14 18 8.5e-07 0.00011 23.3 7.7 1 23 793 815 793 815 0.98

15 18 0.00027 0.033 15.5 9.5 1 23 821 844 821 844 0.95

16 18 0.00022 0.028 15.7 0.5 1 23 850 872 850 872 0.97

17 18 0.001 0.12 13.6 4.4 1 23 882 904 882 904 0.98

18 18 8.3e-06 0.001 20.2 1.7 1 23 910 933 910 933 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	4.6e-05	0.0057	17.8	2.1	1	23	429	451	429	451	0.96
2	18	1.2e-05	0.0015	19.7	0.4	1	23	457	479	457	479	0.97
3	18	2.3e-05	0.0028	18.8	0.5	1	23	485	507	485	507	0.98
4	18	1.9e-05	0.0024	19.0	3.1	1	23	513	535	513	535	0.97
5	18	4.4e-05	0.0055	17.9	4.7	1	23	541	563	541	563	0.99
6	18	8.1e-05	0.01	17.1	5.7	1	23	569	591	569	591	0.97
7	18	2.2e-07	2.8e-05	25.1	4.3	1	23	597	619	597	619	0.98
8	18	1.4e-07	1.8e-05	25.7	2.4	1	23	625	647	625	647	0.97
9	18	0.00019	0.024	15.9	5.7	1	23	653	675	653	675	0.97
10	18	2.4e-05	0.0029	18.7	6.5	1	23	681	703	681	703	0.98
11	18	4e-06	0.0005	21.2	4.5	1	23	709	731	709	731	0.98
12	18	9.3e-06	0.0012	20.0	8.1	1	23	737	759	737	759	0.98
13	18	2.3e-06	0.00028	22.0	7.9	1	23	765	787	765	787	0.98
14	18	8.5e-07	0.00011	23.3	7.7	1	23	793	815	793	815	0.98
15	18	0.00027	0.033	15.5	9.5	1	23	821	844	821	844	0.95
16	18	0.00022	0.028	15.7	0.5	1	23	850	872	850	872	0.97
17	18	0.001	0.12	13.6	4.4	1	23	882	904	882	904	0.98
18	18	8.3e-06	0.001	20.2	1.7	1	23	910	933	910	933	0.96

Sequence Information

Coding Sequence: ATGGGAAATATTGATGAAAGTATTGGAGCTGAGGAGGCAGAAAGAATAAGGAAGCAAGATATCCAAAGGAAACTTCGAGAGGAAATGGGAGTCGACGtggataaaataaaacaaggaTTTGGAAATACTAACGATGAAAATACATCGAGAAGATTTTTTGTAGAACCAGATTTAATAGCTCGTATAACTGGAGTCAATATGGAGGTGATAAGAAGGCTTCAACTTGGAAAATACTGGGTTGTTACGAATCTTTTTCAGGGACCCGGACAGCCGCCATACAATATTGGTGTAACACCAACAACTTCAGCAGTTCCTTCAATACCGCCTCCGATTTCATCGCATTCAAGTGCTTCGGCAGCCAAGGCAGCAAACTCtaagcaacagcagcagcagcaagatcaacaacagcaacagcaacagcaactaGCATCAAACTCACACACTCAATCACCATCAGCACATATTGTTTCGTCTGTTGGTGCTACATCCCTACAAATACCCAATCCAATGATAAATACGGGAATGAGTCAGCATCAGCTTCCAAATGGCACAATAATCGCAGGTCCACGTCATCCGGATTCTTTGCACGTTCATGgAACGATGTCCGGCGACGACAATCGACACGTCTCACACGGTATGCAAGACATTAAGGAGGAAAAACCTTTCGCTAATGGCAAGTCAAACATACATATGgcacatgtaaatccagcatctTCCATTTCGGCAAAAATGAATTCTGGCAGTGTGGGAAACGTTGGAAACAATGGCCAATCAACTGAACCAGGCAGCCAAATGGTCAAACTGCAGACGGGTTCTGGCCCTGGTGCTGGTGGTAGTGGAGGGAGTAACGAACAAGAAAGCAAACCACCCCACGGTGTTGAAATGTATAAAGTCAATATAGAAGACTTGAGCCAATTTCTATCATATCACGAAGTATTTGGCAAGATCCATGGGGAAGTAATAAATCAACAGCAAATATCGCACACGGTAACTCATCCTACTACGAATGTATCGACTTCAAATGCGAGCGGAAACACCGCAGTGAGTGGTTCTGTTCCTGGCTCACTACCTCCACCACCGTCGACTAATGGAAACTCGATAGTGTCTACCAATAGTCTAACCAGTTCAGGAACTGTTGCCCAAGCAGTTCCACCGACTGGCTCAGCTGGAGTACCTACTGCACCTGGTGAACTAATTTTACCCAAGATGGAAAATCAAGGGATGGGTGTTGATCAGAGCACCCCATTGCTTGCACCGGACGGAACACCCATCATGGGAGGCACGCATATCTGTGACATCTGCGGCAAAATGTTCCAATTTCGTTATCAGTTAATTGTACATCGTCGTTATCACAGTGAGCGCAAACCATTTAACTGTCAAGTTTGTGGACAGGGATTCACCACATCGCAAGATCTAACACGACATGGTAAGATTCATATTGGCGGACCAATGTTCACGTGTGTGATTTGCTTCAATGTGTTTGCCAATAATGCCAGCTTGGAGCGGCACATGAAACGTCATTCGACGGACAAACCTTTTGCGTGTACCATATGCCAGAAGACATTTGCTCGTAAAGAGCACCTGGATAACCACTTTCGCAGTCATACAGGTGAGACGCCCTTCCGTTGCCAATATTGTGCAAAAACCTTCACACGAAAAGAACACATGGTGAATCATGTGCGTAAGCATACTGGGGAGACGCCACATCGTTGCGATATCTGTAAGAAATCTTTTACGAGGAAAGAACACTATGTTAATCATTACATGTGGCACACAGGTCAGACACCGCATCAGTGCGATATTTGTGGCAAGAAATATACAAGGAAGGAACACCTGGCCAATCATATGCGATCACATACAAATGATACACCATTCCGGTGTGAGATTTGTGGAAAGAGTTTTAGCAGAAAGGAACATTTCACTAATCATATTTTATGGCATACagGAGAAACCCCCCATCGCTGTGATTTCTGTGCGAAGACGTTCACCAGGAAGGAGCACCTATTGAACCATGTTCGCCAACATACGGGTGAGTCACCACATCGCTGCACCTATTGCTTGAAGACCTTCACTCGTAAGGAACACCTAGTGAATCACATTCGTCAACACACAGGCGAAACACCATTCAAGTGCACCTACTGTACCAAGGCTTTCACACGGAAGGATCATATGGTAAATCACATCCGTCAACATACTGGAGAATCACCACATAAATGCACGTACTGCACGAAAACCTTCACCCGGAAAGAGCATCTGACCAACCATGTCCGCCAACATACCGGTGAGTCGCCACATCGTTGCACCTACTGCAAAAAAACGTTTACACGCAAGGAACACCTAACCAATCACATCCGGTTGCATACAGGCGATTCGCCCCACAAATGCGAATACTGCCAAAAGACGTTCACACGTAAGGAGCATCTGAATAATCATATGCGCCAGCATTCAAGTGACAATCCGCACTGTTGCAATGTTTGCAACAAGCCGTTTACACGCAAGGAGCATCTGATCAATCATATGTCGCGTTGTCATACCGGCGATCGCCCATTTGCTTGTGAGACTTGTGGTAAAAGTTTTCCCCTCAAAGGCAACTTACTATTCCATCAACGAAGTCACACCAAAGGTCAGGAGTGTGAACGTCCATTTTCTTGCGAGAAATGcccgaaaaatttcatttgcaaAGGTCACTTGGTATCGCACATGCGATCCCATTCTGGAGAAAAGCCACATGCTTGCACCATGTGCAGCAAGGCATTTGTGGAAAGAGGGAACCTCAAGCGTCACATGAAGATGAATCATCCCGATGCTGTAATGCCGCCACCTCCTACACCTTTACCCGGGCTTCTGACGCAAATTAAACAGGAAATCAAGCCGATCATAATTCCTCATCAACCCCCAACTATGCATACGATACAACAAATCACTTCAACTGCAGGCAGCACAAGTGCAAACAATCCTGGCAATCCCGCCCTTTTGGCACCTGGTCTGGTTCCAATGGTTACATCTACTATTACTTCACATATAAAGCAGCAATCCCACttacaacaacagcagcaacagcaccaacatcaacatcaattgcaacaacaacagcTTTTGCAGCTGTCAATTCAGCAAGCAGCTCAACATCAACAAGCTGCTCAACATCAACAAGCTGAGCATcggcaacagcaacaacaacaacaacaacagcagcaacaacaacaacagcaacagcaacaacaacaacaacagcaacaacagcagcagcaacagcaacaagtccaacaacaacagcagcaacatcaGCAACAAAGCCatcaacaacaccaacaacaacaagctcAACAACAATCGCAACAGCAATCACAACAGCATCAACAGCCTCAACCGCCTTCAGTGCCGTTAGCTCTCATTGGAGCCGATCCCTCAGCTATAGCTCGAGCTGCTATGCAATTACAACATTTACCAACCAATGTCGAACAACATCCAGTGGTGTATTAA
Protein Sequence: MGNIDESIGAEEAERIRKQDIQRKLREEMGVDVDKIKQGFGNTNDENTSRRFFVEPDLIARITGVNMEVIRRLQLGKYWVVTNLFQGPGQPPYNIGVTPTTSAVPSIPPPISSHSSASAAKAANSKQQQQQQDQQQQQQQQLASNSHTQSPSAHIVSSVGATSLQIPNPMINTGMSQHQLPNGTIIAGPRHPDSLHVHGTMSGDDNRHVSHGMQDIKEEKPFANGKSNIHMAHVNPASSISAKMNSGSVGNVGNNGQSTEPGSQMVKLQTGSGPGAGGSGGSNEQESKPPHGVEMYKVNIEDLSQFLSYHEVFGKIHGEVINQQQISHTVTHPTTNVSTSNASGNTAVSGSVPGSLPPPPSTNGNSIVSTNSLTSSGTVAQAVPPTGSAGVPTAPGELILPKMENQGMGVDQSTPLLAPDGTPIMGGTHICDICGKMFQFRYQLIVHRRYHSERKPFNCQVCGQGFTTSQDLTRHGKIHIGGPMFTCVICFNVFANNASLERHMKRHSTDKPFACTICQKTFARKEHLDNHFRSHTGETPFRCQYCAKTFTRKEHMVNHVRKHTGETPHRCDICKKSFTRKEHYVNHYMWHTGQTPHQCDICGKKYTRKEHLANHMRSHTNDTPFRCEICGKSFSRKEHFTNHILWHTGETPHRCDFCAKTFTRKEHLLNHVRQHTGESPHRCTYCLKTFTRKEHLVNHIRQHTGETPFKCTYCTKAFTRKDHMVNHIRQHTGESPHKCTYCTKTFTRKEHLTNHVRQHTGESPHRCTYCKKTFTRKEHLTNHIRLHTGDSPHKCEYCQKTFTRKEHLNNHMRQHSSDNPHCCNVCNKPFTRKEHLINHMSRCHTGDRPFACETCGKSFPLKGNLLFHQRSHTKGQECERPFSCEKCPKNFICKGHLVSHMRSHSGEKPHACTMCSKAFVERGNLKRHMKMNHPDAVMPPPPTPLPGLLTQIKQEIKPIIIPHQPPTMHTIQQITSTAGSTSANNPGNPALLAPGLVPMVTSTITSHIKQQSHLQQQQQQHQHQHQLQQQQLLQLSIQQAAQHQQAAQHQQAEHRQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQVQQQQQQHQQQSHQQHQQQQAQQQSQQQSQQHQQPQPPSVPLALIGADPSAIARAAMQLQHLPTNVEQHPVVY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00426545;
90% Identity: iTF_00976727;
80% Identity: -