Eeuc003079.1
Basic Information
- Insect
- Epistrophella euchroma
- Gene Symbol
- Clic
- Assembly
- GCA_947049305.1
- Location
- CAMRIP010000017.1:1799418-1811407[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.2e-11 1.9e-08 34.7 0.0 4 43 138 178 136 180 0.88 2 2 1.2e-11 1.9e-08 34.7 0.1 5 39 249 283 246 288 0.92
Sequence Information
- Coding Sequence
- ATGGATAGAAAACGCTCCCGCGTGGACGAAAAGGAAATCATCGAAGTTTTTGAATCAGGAGAAGATTCCATGTCACATAATAATCAGTTGGATCAACCGCGTCTGCCAGTAATGAGAGTTTGCTCAGGAAACGATGAGTACATTATATACGAATTAAAAGGTGATACTCAACCAACACATAGCTATGTCGTCAAAAACCCCAAAGAACCACAACCTGACTGCGTAAATGCAGAAGAAGATAAAATTTCTGATAGCATCGTTTCCAGTATTAACGGCCCAATAGCAGATCCCGGACCATACACAATAAGTTTTGAAATACCAGTTGAAAAATATCAAACAGATAATTGTAAGAAGAAATTCCCACAATCAAAACGTGCTTTAGCCAAAAGAAAGCGTGCTTTAGCGCAAAAAAGACTCGCAGaagctgttgttgctgttgtcaATAATGGCATGACCATTGGTAAAGCTGCAATAGCCTTCGAAGTGACAAAGAGTACCTTATGGAAAGAAGTTAATAAACACACTAACCACCGACAAAAGAAAGTTAACGAAGATCTCAATAAGAAGATCGTTGATCGTATTTGTGCCGGTGAATCGCTGTCAGCGATTGCAAGATCCTTAAATGTGGCAAAATCCACAGTACACCTGCATAAAGTTCGACTAGCACAAGCTGGTCAGCTTCCATCGAATGTAACCTTCAAACCGCCTGCAGATAAAACCGAACAACTTGCCATCAAGAATCGTATAATTCGGGCTTTTCGTGCCATTCGAGTAAATGGCATGTCGTTGCGTTTAGCATCATCGTATTTCTCAGTACCACGATCGACGCTGTGGAAGCACATACGTCGATTTCGAGCTTCTCAAAAGCAACAAGGAAAAGCTGCCCAACACGCCAAAGATTCTGAAAAAGCAgtcaaagaagaagaagaagaagtcgATGAAAATAGTGTAGAGAAAATTTTGAGTGAAGAGGACGATGAATCAGAAAGTGATGATGTTCCTCAAGTTGTCGATGAGAATACCTCCGATGTACAATCTACAACAACAGAAGATGACTTGAATTTACTGGATGCTTATTGTGCTAAACACATAAATGATCCAAGTGAAGAAGGCgacttttttataagttttgacTTTGAGACTTTTGAGGAGTATgCATCTACAATCGATGGAAGACGTAAAGGAGCTTGCCTTTTTTGCCAAGAATATTTTATGGATTTGTACCTGTTAGCCGAACTTAAAACGATAAGTCTAAAgGTTACAACAGTTGATATGCAAAAACCTCCACCAGATTTTCGTACCAATTTTGAGGCGACACATCCGCCAATTCTTATTGACAATGGTCTGGCCATActggaaaatgacaaaattgaaaggcACATCATGAAGAACATCCCTGGTGGATACAATCTCTTCGTACAGGACAAAGAAGTAGCAACCTTGATTGAAAACCTGTATTCTAAATTGAAACTGATGTTGGtcaaaaaagatgaaaacaaaaacaacgccTTACTGTCACATTTAAAGAAGATCAACGATCATTTGGCATCACGTGGAACACGTTTTCTAACGGGTGATACTATGTGTTGTTTTGATTGTGAACTGATGCCAAGATTACAGCATATTCGAGTGGctggaaaatattttgttgattttgaaaTACCCACTCATCTGTCATCCTTGTGGCGTTACATGTATCACATGTATCAATTAGATGCCTTCACGCAATCCTGTCCAGCCGATCAGGATATTATAAATCATTATAAACTACAACAGATGCTCAAAATGAAGAAACACGAGGAACTGGAGACACCAACATTCACAACGTCAATTCCGATTGATATTTCGGAATAA
- Protein Sequence
- MDRKRSRVDEKEIIEVFESGEDSMSHNNQLDQPRLPVMRVCSGNDEYIIYELKGDTQPTHSYVVKNPKEPQPDCVNAEEDKISDSIVSSINGPIADPGPYTISFEIPVEKYQTDNCKKKFPQSKRALAKRKRALAQKRLAEAVVAVVNNGMTIGKAAIAFEVTKSTLWKEVNKHTNHRQKKVNEDLNKKIVDRICAGESLSAIARSLNVAKSTVHLHKVRLAQAGQLPSNVTFKPPADKTEQLAIKNRIIRAFRAIRVNGMSLRLASSYFSVPRSTLWKHIRRFRASQKQQGKAAQHAKDSEKAVKEEEEEVDENSVEKILSEEDDESESDDVPQVVDENTSDVQSTTTEDDLNLLDAYCAKHINDPSEEGDFFISFDFETFEEYASTIDGRRKGACLFCQEYFMDLYLLAELKTISLKVTTVDMQKPPPDFRTNFEATHPPILIDNGLAILENDKIERHIMKNIPGGYNLFVQDKEVATLIENLYSKLKLMLVKKDENKNNALLSHLKKINDHLASRGTRFLTGDTMCCFDCELMPRLQHIRVAGKYFVDFEIPTHLSSLWRYMYHMYQLDAFTQSCPADQDIINHYKLQQMLKMKKHEELETPTFTTSIPIDISE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00893775;
- 90% Identity
- -
- 80% Identity
- -