Eeli019298.2
Basic Information
- Insect
- Epistrophe eligans
- Gene Symbol
- Znf296
- Assembly
- GCA_951394125.1
- Location
- OX596030.1:99211579-99213645[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 13 1.8 1.7e+02 3.5 0.2 2 23 179 203 178 203 0.78 2 13 3.7e-05 0.0034 18.3 3.0 1 23 209 231 209 231 0.98 3 13 3.1 2.9e+02 2.7 0.2 3 10 238 245 236 260 0.82 4 13 0.11 11 7.3 0.2 2 11 266 275 266 281 0.78 5 13 2e-05 0.0019 19.1 6.8 1 23 295 317 295 317 0.98 6 13 3.1e-07 2.9e-05 24.8 0.5 1 23 323 345 323 345 0.99 7 13 8.6e-05 0.008 17.1 4.9 2 23 351 372 350 372 0.97 8 13 0.23 22 6.3 1.1 3 23 381 402 380 402 0.90 9 13 2.7e-05 0.0025 18.7 1.7 1 23 427 449 427 449 0.99 10 13 1.1e-05 0.00098 20.0 2.6 1 23 455 478 455 478 0.96 11 13 3.6e-06 0.00033 21.4 0.3 1 23 484 507 484 507 0.93 12 13 5.7e-05 0.0053 17.7 1.2 1 23 513 535 513 535 0.97 13 13 8.4e-06 0.00078 20.3 2.3 1 23 541 563 541 563 0.98
Sequence Information
- Coding Sequence
- ATGAGTATTGCAGATAGGACATGCAGAACCTGTGGCAAGGCATCAGAGTTGAATGATGACTCACTTCTCTTTCCACTCTTTAATCCAGTCGATTATGagtctgaaataaaaattatactagAAGAATTTGAGATATggaatttaaatATATCCCAAACAGATGGTCTCCCACAGAAAATTTGTCTATCATGTTTTGATAGCTTTTGCCAAATTCATAATTTTCGTATATTGTGTATCGAAGCACAAATGAATTTTGGAGAAATGTGTACGGGCTTGGATATAATTATTCAAGATAAAATAACCGACGAAGATAatgatttttctgaaaatttttatgGCGAAGAGTCGGTGATTGTTCAAGAGCATTACACTTTCCCGGGTGATGAACGTTTGAAATCAGTTGCTTCCACTATTTCAGCAGACTTAATTGACAATATAAAACATTCTCCCGATTCTGACGTAGAGGATACAAAAAAACTAGAGATTCACGAATCTGACGAAACAGATACTGTTATTCCCGAATTCAAAGAATATCGGTGCGAATTCTGCATGGAAATTGTAAGTTTTGATGACCCGGACATGCTCAATGAGCATTACAATGAACTCCACTTAACAAATTTACCCTATACGTGTCCAAAATGTGACAAGTGCTTTGATACAAAAGCAAAGCGGAACAGTCATGCACGAATTCATTACCAAATAGTTCTTGATTGTGAAAAGTGCGGCAAAAAAGTGAGAGGTGGTAAAAAAATGATGATGCAGCATATTGAATACAATCACGTTGACAAGGACCGTGAATGCCCGACCTGTGGGAAAAAGTTTAATATGGTGTCTTTGAAAAGATTCAATTATCACCTAAGTTGGCATGATGATTCAAAGCTGCACAAATGCAAATATTGTGATAAAAAGTTCATTCAAACCACACATTTAACGGTACACGAGAGAACTCATACTGGAGAATGTCCATTTAAATGCAATGAATGTGGATTGGcctttaaaaattcaaatcttcTAAACAACCACATTCAAATGCATGGAGACAGAGAAATACAATGCACTCAGTGTCCTAAAAaattttttCATCGTCATGCATTGAAGCTGCACATGAAAATTCACAACCCAGACAGGAAACATCCTCATTGTGAGATTTGTAATATAACATATGGATCTGTAATGAATTTGCGTTTGCACAATTACAAAAAGCACGATGGACCTGCAACACCATCGATACTTAACATAATAAGAAAACGAGAAATAAAGCACCCGGTTATTAAACCATATAAATGTAATGAGTGCCCTCAGACTTTTGTGTTGCACACACAGTtagtaaaacatttaaaaattcataacgaGGATAGGCCGTTCTCTTGTAAAATCTGTTTAAAGACTTTCAAACGACTGGCACACTTGAAACTACATATGGATTCACTGCATTTGAACAAAAAACCACATAAGTGTTCGATATGTGGGTGGGCTTTCCCACAAaggaataatttaaaagaacacATTGCTGCCAAACATGAGAACAATAGAGACTTCAAATGTGATCTTTGCCCAAAGGAGTTTGCGACATTAAAGTCTCTAAAAACACACAAAGTAAAACATTCAAAGAAAAAACCATATGTTTGTACAGTGTGTAATAAGAGATTTAAACAATTGTTTGTGTTAAAAACTCACATGAATCGTCATCTAAGGAAAAATGAAGCCGACATCGAAGGAGGAGATATAACGGATATTGTTGTTGAAGAGGAATTGGAagatgtttaa
- Protein Sequence
- MSIADRTCRTCGKASELNDDSLLFPLFNPVDYESEIKIILEEFEIWNLNISQTDGLPQKICLSCFDSFCQIHNFRILCIEAQMNFGEMCTGLDIIIQDKITDEDNDFSENFYGEESVIVQEHYTFPGDERLKSVASTISADLIDNIKHSPDSDVEDTKKLEIHESDETDTVIPEFKEYRCEFCMEIVSFDDPDMLNEHYNELHLTNLPYTCPKCDKCFDTKAKRNSHARIHYQIVLDCEKCGKKVRGGKKMMMQHIEYNHVDKDRECPTCGKKFNMVSLKRFNYHLSWHDDSKLHKCKYCDKKFIQTTHLTVHERTHTGECPFKCNECGLAFKNSNLLNNHIQMHGDREIQCTQCPKKFFHRHALKLHMKIHNPDRKHPHCEICNITYGSVMNLRLHNYKKHDGPATPSILNIIRKREIKHPVIKPYKCNECPQTFVLHTQLVKHLKIHNEDRPFSCKICLKTFKRLAHLKLHMDSLHLNKKPHKCSICGWAFPQRNNLKEHIAAKHENNRDFKCDLCPKEFATLKSLKTHKVKHSKKKPYVCTVCNKRFKQLFVLKTHMNRHLRKNEADIEGGDITDIVVEEELEDV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00665077; iTF_00427516;
- 90% Identity
- -
- 80% Identity
- -