Echr005211.1
Basic Information
- Insect
- Epirrita christyi
- Gene Symbol
- -
- Assembly
- GCA_951392215.1
- Location
- OX595837.1:15271777-15282272[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 30 0.49 33 5.9 4.9 1 23 238 261 238 261 0.89 2 30 0.00088 0.06 14.6 0.6 3 20 293 310 291 312 0.93 3 30 0.00017 0.012 16.8 0.3 2 23 347 369 347 369 0.97 4 30 0.00014 0.0094 17.1 1.1 1 23 414 437 414 437 0.96 5 30 0.015 1 10.7 0.1 1 23 460 482 460 482 0.96 6 30 0.0034 0.23 12.7 2.7 2 23 566 587 566 587 0.97 7 30 0.00028 0.019 16.1 2.0 2 23 633 655 633 655 0.97 8 30 0.00028 0.019 16.1 1.3 1 23 705 728 705 728 0.97 9 30 0.00039 0.027 15.7 0.1 1 23 783 805 783 805 0.97 10 30 0.0021 0.14 13.4 6.0 1 23 816 838 816 838 0.97 11 30 0.087 5.9 8.3 1.1 2 23 850 871 849 871 0.96 12 30 0.0059 0.4 12.0 0.9 1 23 881 903 881 903 0.98 13 30 0.74 50 5.4 4.2 1 23 932 954 932 954 0.92 14 30 0.0073 0.5 11.7 7.8 1 23 965 987 965 987 0.98 15 30 0.0083 0.56 11.5 1.4 1 23 995 1017 995 1017 0.96 16 30 0.00036 0.024 15.8 0.2 2 23 1037 1059 1036 1059 0.97 17 30 0.06 4.1 8.8 2.1 1 23 1077 1099 1077 1099 0.97 18 30 0.4 27 6.2 0.8 2 23 1140 1162 1139 1162 0.92 19 30 0.0049 0.34 12.2 0.2 2 23 1185 1206 1184 1206 0.95 20 30 0.49 33 5.9 0.3 2 20 1210 1228 1209 1229 0.92 21 30 0.11 7.6 8.0 2.3 2 23 1249 1271 1248 1271 0.96 22 30 0.053 3.6 9.0 0.6 2 23 1287 1308 1286 1308 0.91 23 30 1.5 1e+02 4.4 1.4 5 23 1318 1336 1316 1336 0.94 24 30 0.00021 0.014 16.5 1.2 2 23 1347 1369 1346 1369 0.95 25 30 2.4 1.6e+02 3.7 6.7 2 23 1386 1404 1386 1404 0.94 26 30 1.3 91 4.5 3.3 2 21 1408 1427 1407 1428 0.94 27 30 0.62 42 5.6 2.9 2 23 1476 1497 1475 1497 0.93 28 30 0.0055 0.38 12.1 0.4 2 23 1508 1530 1507 1530 0.97 29 30 0.61 42 5.6 0.8 2 23 1546 1564 1546 1564 0.79 30 30 0.28 19 6.7 4.9 2 21 1568 1587 1567 1588 0.94
Sequence Information
- Coding Sequence
- ATGGCCCTCAAACTTGGAAAATGCAGGTTGTGCCTCAAGCTCGGCGACTTCTACTCCATCTTCGCGGCGGATAATGATGTCCAACTGTCGGAGATGGTCATGGAGTGTTCCAGGATAAAAgtCTATGATGGGGACGGACTACCAGACAAAGCGTGCTCTGAATGCATACAGAAGCTCAGCAGCGCCTACATATTCAAGCAGCAGTGCGAGAGGTCCGACCAGGAGCTGCGACGGAACTATGTCCCTCCACCAGGGTTCAGTATCAGCCCACCGCCACCAACAACCCGGCAAAGCAGCGACTCGGCTTTCTCAACACACACTGACAGCTCCAACTTAAAGGCGTCTTTCATAGAAAGCAAAGCAACGCCTGTCAGCAGGAACAGAAAGAGAAGCGTTGAAAGTGACAATGCGTCTATCGGCAGTCGTTCTCAGGAATACTGTAGATCCAGCTCAAAACTAAAGTCATCTTTCACAGAAAAAGTAACACCCGTCAGTAGGAAAAGAATGAGAAGCATCGAAAGCGACAACGCTTCTATCGGTAGTCAGTCTCAAGAATACAGCAGACCCAGCAGCTCCAAGCGGGTAGAAGAACTTAGAAAATCACAAAAACCAAAACGCCCGCGTTACTCCGAAGACTCCGATTATGAAGACAACGGAGCCTCCAGCTTTGTAAACGAAACAGATTCGGACGAACCACTCCTCAAGAATGAACACACTTGCCCTCACTGCTCAAAGACTTTCAAATGGATGAAGAGTATGAAGATACACATTGCTCATATGCACACAGGGAAGAGAGCGATCTCGCGAAATGAGTTCGCCGTCAACATTCCGATAAGAAGCATGGAGATTCCCGAAAACAGTGACGATGAAATGAACTGCGACAAATGTGGAAAAAAGTTCAAACTTAAGATAATGCTGAAGCGTCACCAAGCATCATGCCAGAACCCGCCAGTTACGCCATTGCCGAAATCGCCCATGAAAGAGTTGGTGATAACTTTAGAACCAATAGACGGTGTACCACAACGCACGAAGAAGCCAACATGCGAATACTGCACGGCCCAGTTCAAAACCGTCGATAACTTAGAGAAACATCTAAGAGTTGTCCACGCAGCGACGCGCAAGAAAGATAAAGCTGAAAAAGGACCTCTAATATGTATCTACTGCGCTAAAGGTTTCGATGATTACTACGTATACAGTTCGCATTTCAACGGATGCCCGATGAAAGAGAATCTATCGTCTTTCCAATGTCCTATGTGTCCGAAGTCTTGCAGCCGAGCCAGTGGTTACGTGAACCACGTGAAGAACTCTCACTACTTGGTGTCTGGTGGTAAGACGGAACCGTTGTCGCCGACTCAGAGCCAGGCAGGCCAGCAGGCGTTCGAGTGCCGTATGTGTAGCAAGAAGCTGGCCACACAGGCGCTGCTGATCACGCACTTGGCCGCGCACATGTCCAACGTTGACGACGATGACAATGCAATTGCTGATACTGATGATTTCGACTCAAGCTGTATTCTGGGTACATTCTGGGTGGAACGATTTCCGCCGCGTCGCCGCGAGCGTTCACGTAAAGAGTCGCCTGCCGCGGCCATCAGCTCATCAAATTGTATTTTCAGAGAGGACACAGTAGCTGATGACTCCATGTCATTACATTCCACACACAGCTCGCAGGCCTCGCACTCGCAATCTGGCCCTGCCAAATGTCGTTTCTGTGATAAAGAgttcaaatacaaaaaatcaCTCATATCTCATGAGCTGAAACATAGCGAAGATAAAGTACCCGTGAAAGTCGAACCTCCCGACAAGCCGGCATCGGCAGATCTACTCACAGAGACAAACAATGAGTTCGCCAAGGAGTTCGACTCGGAATCTAGTCAAGACGAGGGAGAGGAAGACAATACGTGCGATATTTGCGAGAAACAATTCTCTTACAAACGGCTGCTCATACAACACAAGCGCACGAAGCATACCATGGTAGCTGGCATGAAGCGAGCTAAAATAAGCCTTAAGGATTGCTCCGTAAGGTGTCTGATCTGCGATGAGGAGATGAAAGTGAGTGCTATCAATGAGCACAATCAGAAGCATATCTCGGTGAATATACGGCCGAGGAACATCTACACTTGTGCGGAGTGTGCGCAGAAGTTTAAGAGCTGCAGCAACCTCGCCAATCACATCAAACTAGTTCACAGATTGAAACAACAAGAGGTGCCGAAGCAGTTTGCCGGCGTGGACATGGCGGATTTTTGCGAGGTCGTTGTGACGAAAGCGGAACCCCTGGATGAATCCCAGACTCACAACGGCTTTGGCgagGTTCCGCTAAATACAGCTCCTACAGTGAACCTGACCGGGTTCACGTGTCCCATCTGTGGGAAGAAGATGCCCACGCTGGTGTCGCTCAAACGACACGTCAACTGGCACTCGTTTGTGGGGAATAATTTGGAGGGCAAGCACGAGTGCTTCGTGTGTAAAGAGACCTTCAAATTCAAAGGACACTTCAAGATTCACATGCGCGATCACTATAAAGACACCAACCTGGACCCCGTGCTGCTCACCTGCTCCATATGCCAGCGCAAGAGCAAGCACCTCCGCGCTGCGCAGGCGCACATGAACTGGCATAAGCAGACCCGATTCCAAACAAAGGACTACCAGTGCTCCATTTGCAAGCGCGTCTTCCAGTACCGGCGCGTCTACCTCTCCCACATGGCCATCCATTACAAGAAGGGCGAAAGTGGACAGAACACCATCGTCGGAGACATGGTCTCCAATAACCAGGACCGGACTACCTTCGACGGCACATTCACTTGCCAGCTCTGCGGTAAGGTATGTGACTCTGAGAACTCGCTCAAGTGCCACACTAGCTGGCACCGATCTAAGACGCTGCTCTATGGAGCGCGACACGAGTGTCAAATGTGTCATCTGCAGTTCACTAATAAGCGCCATTTAGAGTTACATACTCGTTCGCATTACGAGGACCCGAACGGTGAGTTCAAGTGCAATTTATGCGGGAAAGGTTTCATAGATGAGGAGTACCATAGGCGTCACGTGAAAGGACATAATTTTGATCACCAGTCTCACAAGAAGAGGATAGAAAATCTTCGGAAGGGTAAAGTAAAATGTCCGATATGCAACCGGTACTATCCGGATCTAGTTAAGTTGATCCGCCATCTACGACGCACGCATCCTGAGAGCAAGATGATTAAGGAGGATCCTGACGCGCCTCCACGAAAATATTACTCCTGCAAGCTGTGTGCCAAGTCGTTTTACGACGAGAAACGATTCAAGAGCCACGAGGAGTCGCATCTCCGGAAACCCAGCTTCTTCAAGTGTAAGTTCTGTGGCCACAAGACCATGTCCATGAAAGGCCACCACATTCACATCAAGACGAAGCATATGACGAAAAAGTATGTGGAGAATCCTTTGAAGTGTACGCAGTGTGATGAGGTTTTCATCTGGGGGTACGCCCTGCACCATCACTTGCGTGATGTACATGGTATCAACGAGGACTGGATCGCCGAGCGGACCGAAGCCACCCTGGAAGGTCCGCTGAAGGACCTCCAATGCTCCGTGTGCTTGAAAGTCCTCGCGAGTAAGGGTAACTTTGAACGACATATTGACTATCACAACACCCTGCGTTGCAACTACTGCTTCGAATACTTCAGCACGCTACGCTTCCTAGAGGGCCATCTCGCTTTCACCTGCGACAAGAAGAAACTGATCGGCGACGCTGACCCGCACCCGAAACGAGTCAAATGCGAAATATGCTACAAGTCATTTAGCTTACAAGTAAAGCTAGATTGCCATCTCAGAACTCAGCACGCAATAAAAGTGAACAAGGAACAGAGAGCGGGTAAACAGGAGCTAGTTTGCGATTACTGCTTCAAGGTGTTCGAAAATGAGCACGCTCTGAGCGGACACAAAGTCTACCATCGTACCATCGGCTACTTCGGCTGCATCTACTGCCCGAGGAAATTCCTCACTCAGAGTGGATATAGAAAGCACAAGAACTATCACTTCTCGACACATAACGTCGATAACCCAACTAAGTGCGAGCACTGCGACGAAACATTCGTACAGTTCAGAGAGTTGATATACCACATGCGAGACGTTCACGACGACGATAAAGAATGGATCGTGATGCCGAAAGATTCAATCGAGGAGACTTGCACGATTTGTCACAAAACATTCTTCAATCTGCACCGGCATATGGATTACCACGAGGAGAACAAGTGCAAGAAGTGCCATGAGTACTTCTTCTCGTCGGCAGATTTCGATAACCATTTATGCGCTATCGAGAGCGACAACGAAGAAGTCGCGGGCGTCGTAAACCCTGGCATGCCCTACGAGGAATGCAAGTTCTGCTTCAAGCCGATCACCAAAAAAGATTCCAAGAAGAAACATGACATTCTACATGGTACTTCGGGAGCGATATCGTGTAGGTTCTGCCATCTGAAGTTCAAGACTCTCGACGCGTTCAACATACACTCGTTCTCTCACCGCAGCAGAAAATACAACAAGAAGCCGATTAAATGTCGCGTTTGCAAGGAGCGTTTTGTCAAGTACGGCCCTTTCATTAAACATATGAGGGTCCTGCACAAATGCGCGAAGAAGTCGCACTACCGCGCGGTTGTTAAACCGGAGCGATGTGTGATCTGCGGGGAATCGTTCCCAAACTTGCATAACCACTACCGCGCGCACTTGACCAATCAGTGCCAGTTTTGCTCGAAGTACTTCACCTCttcaaaactattttcaaaGCATCAATGCAATGTAATCGACGAAGACCACACCAAAGTCTTTACTTCCGACGAAAACGTGAGCGCGCTGATCAACTCTTACACTCCAAAGGACTTGAAGGATGATGAGAAGTTCTACGGTTAcactgatgacgatgaagagGTTGAGACGGATTTACCTGCTGTAATGACTCAAGTTCAAGATAAAAAGGCTATGAACGGTGCGTCAAAACGCCAGAAGCCAGTGCAAGTCAGCCAAGAGGCCGAATACGAAAGAGACCTGCACATGATGGTACAGTCGCCGATAATATCTGACGTACTGTCGCTCTTCCAAACAGAGGAAGATGTGCAAGAAATCAAGAGCCACAGATTTATGGGAGAAATTGTCAGTTTGACCGATGACGATTCTATGGATATGAACGATATTGCAGCGCCCATTGTTGTAATTGATGATTAG
- Protein Sequence
- MALKLGKCRLCLKLGDFYSIFAADNDVQLSEMVMECSRIKVYDGDGLPDKACSECIQKLSSAYIFKQQCERSDQELRRNYVPPPGFSISPPPPTTRQSSDSAFSTHTDSSNLKASFIESKATPVSRNRKRSVESDNASIGSRSQEYCRSSSKLKSSFTEKVTPVSRKRMRSIESDNASIGSQSQEYSRPSSSKRVEELRKSQKPKRPRYSEDSDYEDNGASSFVNETDSDEPLLKNEHTCPHCSKTFKWMKSMKIHIAHMHTGKRAISRNEFAVNIPIRSMEIPENSDDEMNCDKCGKKFKLKIMLKRHQASCQNPPVTPLPKSPMKELVITLEPIDGVPQRTKKPTCEYCTAQFKTVDNLEKHLRVVHAATRKKDKAEKGPLICIYCAKGFDDYYVYSSHFNGCPMKENLSSFQCPMCPKSCSRASGYVNHVKNSHYLVSGGKTEPLSPTQSQAGQQAFECRMCSKKLATQALLITHLAAHMSNVDDDDNAIADTDDFDSSCILGTFWVERFPPRRRERSRKESPAAAISSSNCIFREDTVADDSMSLHSTHSSQASHSQSGPAKCRFCDKEFKYKKSLISHELKHSEDKVPVKVEPPDKPASADLLTETNNEFAKEFDSESSQDEGEEDNTCDICEKQFSYKRLLIQHKRTKHTMVAGMKRAKISLKDCSVRCLICDEEMKVSAINEHNQKHISVNIRPRNIYTCAECAQKFKSCSNLANHIKLVHRLKQQEVPKQFAGVDMADFCEVVVTKAEPLDESQTHNGFGEVPLNTAPTVNLTGFTCPICGKKMPTLVSLKRHVNWHSFVGNNLEGKHECFVCKETFKFKGHFKIHMRDHYKDTNLDPVLLTCSICQRKSKHLRAAQAHMNWHKQTRFQTKDYQCSICKRVFQYRRVYLSHMAIHYKKGESGQNTIVGDMVSNNQDRTTFDGTFTCQLCGKVCDSENSLKCHTSWHRSKTLLYGARHECQMCHLQFTNKRHLELHTRSHYEDPNGEFKCNLCGKGFIDEEYHRRHVKGHNFDHQSHKKRIENLRKGKVKCPICNRYYPDLVKLIRHLRRTHPESKMIKEDPDAPPRKYYSCKLCAKSFYDEKRFKSHEESHLRKPSFFKCKFCGHKTMSMKGHHIHIKTKHMTKKYVENPLKCTQCDEVFIWGYALHHHLRDVHGINEDWIAERTEATLEGPLKDLQCSVCLKVLASKGNFERHIDYHNTLRCNYCFEYFSTLRFLEGHLAFTCDKKKLIGDADPHPKRVKCEICYKSFSLQVKLDCHLRTQHAIKVNKEQRAGKQELVCDYCFKVFENEHALSGHKVYHRTIGYFGCIYCPRKFLTQSGYRKHKNYHFSTHNVDNPTKCEHCDETFVQFRELIYHMRDVHDDDKEWIVMPKDSIEETCTICHKTFFNLHRHMDYHEENKCKKCHEYFFSSADFDNHLCAIESDNEEVAGVVNPGMPYEECKFCFKPITKKDSKKKHDILHGTSGAISCRFCHLKFKTLDAFNIHSFSHRSRKYNKKPIKCRVCKERFVKYGPFIKHMRVLHKCAKKSHYRAVVKPERCVICGESFPNLHNHYRAHLTNQCQFCSKYFTSSKLFSKHQCNVIDEDHTKVFTSDENVSALINSYTPKDLKDDEKFYGYTDDDEEVETDLPAVMTQVQDKKAMNGASKRQKPVQVSQEAEYERDLHMMVQSPIISDVLSLFQTEEDVQEIKSHRFMGEIVSLTDDDSMDMNDIAAPIVVIDD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01170802;
- 90% Identity
- -
- 80% Identity
- -