Basic Information

Insect: Epirrhoe tristata
Gene Symbol: -
Assembly: GCA_951394285.1
Location: OX596149.1:9041228-9050998[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 17 0.36 24 6.1 0.1 3 23 110 130 108 130 0.96

2 17 0.022 1.5 9.9 0.6 2 21 134 153 133 156 0.87

3 17 0.33 22 6.2 0.3 3 23 404 425 402 425 0.94

4 17 0.47 32 5.7 0.1 1 19 433 451 433 453 0.94

5 17 0.88 59 4.9 0.4 2 23 464 485 463 485 0.91

6 17 0.0046 0.31 12.0 2.8 1 23 533 556 533 556 0.95

7 17 0.33 22 6.2 1.5 1 19 633 651 633 656 0.82

8 17 0.54 36 5.5 1.2 1 23 661 684 661 684 0.93

9 17 8.6e-05 0.0058 17.5 2.7 1 23 690 712 690 712 0.97

10 17 6.1e-07 4.1e-05 24.2 1.8 1 23 719 741 719 741 0.98

11 17 4e-05 0.0027 18.5 1.4 1 23 746 768 746 768 0.96

12 17 0.014 0.94 10.5 1.9 1 23 774 796 774 796 0.95

13 17 1.8e-06 0.00012 22.8 1.6 1 23 802 824 802 824 0.98

14 17 6.4e-05 0.0043 17.9 3.0 2 23 831 854 831 854 0.96

15 17 0.0018 0.12 13.3 0.6 2 23 864 886 863 886 0.96

16 17 0.013 0.88 10.6 0.4 1 23 891 913 891 913 0.93

17 17 0.00053 0.036 15.0 2.2 1 23 919 942 919 942 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	17	0.36	24	6.1	0.1	3	23	110	130	108	130	0.96
2	17	0.022	1.5	9.9	0.6	2	21	134	153	133	156	0.87
3	17	0.33	22	6.2	0.3	3	23	404	425	402	425	0.94
4	17	0.47	32	5.7	0.1	1	19	433	451	433	453	0.94
5	17	0.88	59	4.9	0.4	2	23	464	485	463	485	0.91
6	17	0.0046	0.31	12.0	2.8	1	23	533	556	533	556	0.95
7	17	0.33	22	6.2	1.5	1	19	633	651	633	656	0.82
8	17	0.54	36	5.5	1.2	1	23	661	684	661	684	0.93
9	17	8.6e-05	0.0058	17.5	2.7	1	23	690	712	690	712	0.97
10	17	6.1e-07	4.1e-05	24.2	1.8	1	23	719	741	719	741	0.98
11	17	4e-05	0.0027	18.5	1.4	1	23	746	768	746	768	0.96
12	17	0.014	0.94	10.5	1.9	1	23	774	796	774	796	0.95
13	17	1.8e-06	0.00012	22.8	1.6	1	23	802	824	802	824	0.98
14	17	6.4e-05	0.0043	17.9	3.0	2	23	831	854	831	854	0.96
15	17	0.0018	0.12	13.3	0.6	2	23	864	886	863	886	0.96
16	17	0.013	0.88	10.6	0.4	1	23	891	913	891	913	0.93
17	17	0.00053	0.036	15.0	2.2	1	23	919	942	919	942	0.98

Sequence Information

Coding Sequence: ATGTCATCTGACGACTCAGACGATGAACCGTTGGCCATATTGGCCTcgaaaaaaagtaattatgaaGTCGAAATCGTTCCTATTATGCCTAATAAGAGAGGACGTAAGAAGAAAGCTATTGCTACGAAGAAGACCTGTGATGTGACCATTGAACTGCAATACAAGGAAGATCTCTCATCTGTTACTGTGGAGAGACCCACTGATGTGTGGCTGTACTTAAAAGACTTGAATCCCAATGGCCCTTATAGCTGTTTGCTCTGTTCAGAGTGGTTCATCAACAAGACTAAGATAGTCATTCATTATGTGGTCAATCATAAGAAGGATTTCTGTGGTATATGCAGaTATTTTGTGCCTGATAGGGAATCATGGCAGGCACATTTAAAGTTCCATATACCATGGCAGTGCTCTCAATGCCCTAAGACATTTGAAAATGAACTATTTTTACGATCTCACTTCAGTGACGAGCACAATCTTGTTCACTGCCGGCTTTGTTACACTCGCCTCATTGATGGAGAAGATTACCATGCACATTTGTACCAGAAACACAGTGTCACTAATGTTTCCTGTAAGAATGAGGAATGTTTCTGGGAATTTGAGCAAGAAGACTTCAAATTTCTCTGCATACTTTGCTCTAAATCCAACAACGACATACAGACATTCTCCAACCATTATATGGCATACCATCATCtcactttaaaatgtttggCTCCGCTGATCTCTGGAAAAAACTGGAATTTCCCTGTTCAAGGAGCTGAAGTCAGTATAGATTTCATTGAGAGGCAATTAAAAGAATATGACAAGTATGGCTATTTAGATttggacaaaaaaaaagatagatTAATAGAAAAGGATGAAACTTTAGTTCTGACCAGAGTGATGGCTCATGATTACCAAACTGAACTGGTGAAAAATGAGGCAATGGACGAGCCGGACGAGAACACTAGTACtgctaatgatgatgatggaacTGCTGATGATGACACTGAAAAGAAAGATGAATCTCCTGATGATAAAATAGACGATGAACTCTATAAATCATACAAAGGTGATGAAGATTTTGACACAGCACAAATTGAAATCATTGTTATACACAAATGTTATTTTGATTATATCGAAGACACACTTAACCACATCAACTCTTACATGATGCCAACAGCATCATTCATCAATTACGGTCTTGCCGAAGCTGATTATCCAGTGTCCATAAACTGTGAGTTATGCAAAACTCAGTATGCAACTCTTAACCCTTTCACGCAACACATGGTTAAAATCCATGGTTTTAAAAACGTGCCATTATTCTCTTGCCGTATTTGTGCTACAACATTTGACAGTATCTCAGAGCTAGGACAGCATGAGACGCTTGAATTGGGTGATTTTGATGATCTGTGGATCTGTCAGTTTTGTGAAAAGGAGTTTGATGATCGAGGCAGGACTCGAATGCATCTCACTGAGCACTGGGATGCTATAGAATATGATAACTGCTTCAGTCCTCACTTGGGTTTCAAGTGTAAATTTTGCCCAACTCTCTTTTGGAATGAGAATGACCGTGAGAGTCATACAGTGAAGGTACACTTTCAGAAACACACAGAGCATTATTATAAGTGTGAGAGCTGCGATCAGATGTTCAGTGATAAGATTTGGTTTATACACCACTACTTCTCACAACACATGAGGAACGACGAAGTACCTatcggtacctacctactcaaatgCTGTTTCTGCTGCGTTGTGTTCCCCAGCATAGACTCTATACGGCATCACTTCAATACAAAACACCCTGAAGCTAGAAGGATATTCTGTGCGCTAGACGCTTGTCAGTATAAGCCGTTTAGTCATCGGAAGTCGTTCCATTTGCATTTGAAGTCATTCCACGGCACAAAGAAGCGTCCAAAGACCTTCGTCTGCCAGTTCTGCGGCAAGGAGTTTGGCAGCCAGCGGTCTTGCAGCGCGCATAGTGCGCAGGCGCATGGCCCGGGACGGTTCTCGTGCAATATATGCAAGGAAATGTTGCATACTGCTGATGAGAGGAAAATCCACTATCTCCTCCGACACCCCGGCCGGCATCCATTCCAATGCCGCGACTGCGATAAGTCTTTCCAATACAAGTCATCTCTATATCTACATCGACAGGAACACGCGCCAAATAAGCAGGATTATAACTGTACTTACTGCGGGAAGGTGTTCAAGaAACGTGATTCGTTCCGGGAACACATGATGATTCACGAAGGGCCTAAACACGCGTGTTCTTATTGCCCCATGGTGTTTGTCCAACGCTCTAACATGCTACGTCACGAGAGAAGACATACGGGAGAACGACCTTACGCGTGCCAGTTCTGTCCCAAAACCTTCTCTGACAAGGGAGCCTGCTCGTCTCATTCAAGAATCCATCAGAAGATGCCGGCCTTCCCATGCATGTATTGCGGACAAACCTTTGTGCAGAAGTCGAAACTCACTTACCATATCAGAAAGCATACTGGAGAAAATCTTGAAACGTGCCCGCATGCAAACTGCGGGAAGATATTCACTAGTGCGTGTTCCCTACGCGAGCATATGAAGACGCACGAGAAGAAACACGTGCTGGACCCTGTTAAATGTCCCCTTTGCTCGAAGTCATACCAAGACGAGAAATATATGATGCGACATTTACGCGCGACACACACCAATGCGGCGTTCCTTTGTCCGATTTGTAAGAAGAAATTACACAGCGCGGCTTCTCTAAGAGACCATGTTCTTGCACACAGCGACTCTAAGGCTTACACGTGCAACCAATGCTCAAAAGCCTACAACGTGAAACGCACAATGATTAGACATCTTCGACGTAGACACAGCGTCAAAACGTCCACTGGCCTGTCCGATTACTACAGCAAACTGGACCCTAGAGAATGCAACTTAAACTTAGACGATGAAACTATGAACAGCATTTTTGGACCCCCCAAACGTAAAGATGTTGTCAACTTCACTGCGATGAATCGTTTCAACTTCCGAAAAGAGAATTCTCAGAGTGGAGAAAGTGAGACTGGGATTGTCCCGATAGAAAGTGTTCAAGTCAAGATAGAGTGTGAGGAAGTTGAAGAAATGGAGAAAGAAGAGTTGCAGCCGACGGACTTTGTTAGTGTTAAGATTGAGTGTACGGAGGAGAATGAGGATGAAATGGAAAATAGTGATGAGGAGTactga
Protein Sequence: MSSDDSDDEPLAILASKKSNYEVEIVPIMPNKRGRKKKAIATKKTCDVTIELQYKEDLSSVTVERPTDVWLYLKDLNPNGPYSCLLCSEWFINKTKIVIHYVVNHKKDFCGICRYFVPDRESWQAHLKFHIPWQCSQCPKTFENELFLRSHFSDEHNLVHCRLCYTRLIDGEDYHAHLYQKHSVTNVSCKNEECFWEFEQEDFKFLCILCSKSNNDIQTFSNHYMAYHHLTLKCLAPLISGKNWNFPVQGAEVSIDFIERQLKEYDKYGYLDLDKKKDRLIEKDETLVLTRVMAHDYQTELVKNEAMDEPDENTSTANDDDGTADDDTEKKDESPDDKIDDELYKSYKGDEDFDTAQIEIIVIHKCYFDYIEDTLNHINSYMMPTASFINYGLAEADYPVSINCELCKTQYATLNPFTQHMVKIHGFKNVPLFSCRICATTFDSISELGQHETLELGDFDDLWICQFCEKEFDDRGRTRMHLTEHWDAIEYDNCFSPHLGFKCKFCPTLFWNENDRESHTVKVHFQKHTEHYYKCESCDQMFSDKIWFIHHYFSQHMRNDEVPIGTYLLKCCFCCVVFPSIDSIRHHFNTKHPEARRIFCALDACQYKPFSHRKSFHLHLKSFHGTKKRPKTFVCQFCGKEFGSQRSCSAHSAQAHGPGRFSCNICKEMLHTADERKIHYLLRHPGRHPFQCRDCDKSFQYKSSLYLHRQEHAPNKQDYNCTYCGKVFKKRDSFREHMMIHEGPKHACSYCPMVFVQRSNMLRHERRHTGERPYACQFCPKTFSDKGACSSHSRIHQKMPAFPCMYCGQTFVQKSKLTYHIRKHTGENLETCPHANCGKIFTSACSLREHMKTHEKKHVLDPVKCPLCSKSYQDEKYMMRHLRATHTNAAFLCPICKKKLHSAASLRDHVLAHSDSKAYTCNQCSKAYNVKRTMIRHLRRRHSVKTSTGLSDYYSKLDPRECNLNLDDETMNSIFGPPKRKDVVNFTAMNRFNFRKENSQSGESETGIVPIESVQVKIECEEVEEMEKEELQPTDFVSVKIECTEENEDEMENSDEEY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00267542;
90% Identity: iTF_00661700;
80% Identity: -