Etri001923.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Epirrhoe tristata
Gene Symbol
L
Assembly
GCA_951394285.1
Location
OX596137.1:7018562-7035178[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 17 1.6e-06 0.00011 22.9 1.7 1 23 86 108 86 108 0.99
2 17 0.69 46 5.2 5.8 1 23 114 136 114 136 0.97
3 17 9.2e-06 0.00062 20.5 4.1 1 23 142 164 142 164 0.99
4 17 2.8e-05 0.0019 19.0 0.1 1 23 170 192 170 192 0.98
5 17 2.4e-05 0.0016 19.2 0.1 2 23 208 230 207 230 0.95
6 17 3.3 2.2e+02 3.1 0.3 3 23 254 276 252 276 0.79
7 17 0.33 22 6.2 0.0 3 23 326 346 325 346 0.97
8 17 0.18 12 7.0 0.0 3 23 361 381 360 381 0.91
9 17 7.9e-05 0.0053 17.6 0.6 1 23 389 412 389 412 0.94
10 17 0.035 2.4 9.3 0.1 1 23 417 440 417 440 0.92
11 17 0.0018 0.12 13.3 0.2 1 23 494 518 494 519 0.96
12 17 0.0011 0.073 14.0 0.0 2 23 572 593 571 593 0.96
13 17 0.18 12 7.0 0.0 1 23 601 623 601 623 0.97
14 17 0.87 58 4.9 1.2 2 23 631 652 630 653 0.94
15 17 0.95 64 4.8 0.3 1 23 726 748 726 748 0.94
16 17 0.0038 0.25 12.3 0.1 1 20 756 775 756 778 0.95
17 17 0.12 8.4 7.5 0.3 1 23 785 807 785 807 0.94

Sequence Information

Coding Sequence
ATGATCATGCTATTCAAGGGAAACAGCAGTAGGCTGGAACACCTCATTGAGAAGATACAAGCAAACAAGGAGAACCACGACGTTACCACTGAGGACATAAAAGAGGCGCTGGGCAGCGTGGGCAGCGCGGCGGGAAGCTCCTGGCCGTCGTCGACGCCGGAGCCCTCCCCGTCGCCCGCCTCCACCCCCTCGGCCGACGCAGCTGACGCTGACGCCGAGCCTCCCTTCACTCTCGGCGCCACAGAACACACGCCCTACCAATGCCAGTTCTGCGACAAAGCCTTTCCGAGGCTGTCCTATCTCAAGAAACATGAACAGACGCATTCAGACCAAATGCCGTTCCGATGCGAGTTCTGTTCAAGACTATTTAAGCACAAACGTTCGCGAGACCGACACGTGAAGCTCCACACAGGGGACAGAAAGTACCGCTGTGCGCATTGCGAGTCTGCTTTTTCTAGGAGTGATCATCTGAAAATCCATATGAAAACTCACGATAATCAGAAGCCGTTCCAATGCACGGTGTGCAACCGCGGCTACAACACGGCCGCTGCGCTGACGTCACACATGCAGGGCCACAAGCGGGACCGGGAGGGTAGGGAGCCAGACAGACGACGGGCGATGCGGTGCTTGCGGTGTGGAGAAGCTTTTAGGAGACCTGATTTACTACAGGCGCACATGGCAAGTGCCCACGGAGTCGATGCAGCCGCTCTGACTCCGCCTCGTCGCGTGGCCTCTCAACCACCTCCAACTCTACTCGCCTGCATGTATTGCACTCGTGACACTTTTACAAGTATGGAACAACTGCAATTACATGTTCGAGCGACTCACGCCGCGTTACTCAACGGAGAAGTGATGGTCGACCAACCGGCTCCAACTGACCTTAGTCGACGAGCATCTGACGATGCATCTCCAGCAAAACGTCCACGTTCCGGTTCCGGAACACCGCAGACAACACTTTCACCGAATACATTGTTATGCAACCAGTGTGACGCGGCGTTGCCAGATTTTGAAGCGTTTCGAGCTCATCTGAAAGGACATTTGGAGGAAGGTGGAGAGTTGACTAGGACAAGCCCAGCTCCGTGCGTACATTGTGGAGCTACGTTTGCTGATGCGGCTGCCTCAGAACGGCACCTCACAGCACATTACTTGGCGGTTTCCTGCGAGTATTCATGCCATAGCTGCGCTAGAAGTTTCCCGACGCCTGATGATCTACAGAAACATCTGTTGGATCTTCACGCTCACCATCTTTATCGTTGTTCCTTGTGCAAGGAAATATTTGACTCCAAAGTTGCAATTCAGgtTCATTTCGCCGTCGCCCACAGTGGCGAGAACAAAGTCTGGGTATGCCGAGGTTGCGGCAGCAGTGCCGGAGCCCTACGTTCCGAAGCTGACGGTATAGCACACGTTAGAGCCAGACACGGCGGAGCCCGTTGTTCCTGCGGTGCTTTACTTGGAGGCCCGAGGCTAAGGCCTCGTGCTTATCGGTGCCCAGTGCCGACTTGTTCTGATGCGTTCGCTGTGCAGTATTTGCTGGAGCGGCATATGCAAGTTCATCATGCTATGGCGCAACAGGTTCTAAACGGCGAACTGACCAGACCAAAACGCGTGGAGAACAACAACAGCACAGACGCTGATGGAACTTGCTCTCCTTGTACTACGACCGAACCGGCTCCTACCGACGAACGTAGAAGGAAGAATGGTGCTGTTGCGTTACAATGTGCATACTGTGGTGAAAGGGCGAGAAGTCGAGCGGAACTTGAAGCCCATACAAGGGCCCATTCGGGCGCTTCGGCCGCGAGGCATAAGTGCCTCATTTGTGATGAGATTCTGCCATCTGCTGCTGTGCTGGCTGAACATAAACTGACACATTGCAAGGTGATAGCAGGAGACACATGTTCCCGCTGTCGCGCCCGGCTGGTTTCCGAAGAATCGTTCCTTAGCCACATGGCACGGCATCACCCAGCGTTACCCGCGCCTTGTGTCGTCTGTCGACAAACTCTTGCTTCCGAGGCTGAGGCGAGATTACACGCGCGCTTTCATCTGCGTCCCAATGAGGATGAACAAAGATGTGCAATATGCCTGCGAGCACTACCAGAGGGCGAGGGAGGCGAGGGCGCGCGCGCATGCGCGGCTTGCTACGCTCGCCACTCAGCGCCACGAGCCGCGCCGGCCGACCACGACTGCCGACTCTGTCGCCGCGCGCTTGGCTCGCCCACACGCCTACAGGCCCACCTTATCGAACACACATTTGCAGGCATCGGAGCTTTTACTTGCTACCTCTGTTCCGCTGTTTTCACCAGCGCTGCCGGTCTTCAGCGTCATTTACCAGAACACGCGTCCGCTCCAAGACCGTATGATTGCGCAAGATGTGGGATGAAATTCTTCTTCCGTGCGGAGTTGGATAACCACGCGTTCGTGCATTTAGAGGAAGCTGAGATAGCGCAGCGAGCGTTCTATGAAGCTTACGCTCGTGGAGCGGCGAGTGCTTGGGCTGCTTTGGCCCCGCCTGAGCCTCAAATAACGCCAGAGGTGAAACAAGAACCGGAGATAAAAGAAGAACGTAACGATGAGTATATTGAAGTTGGATCACCCCCACCTCCTATTCCGCCTCAACCAACTCCGCCACCGGTAGTGAAGCAAGAAAAACCAGATGAAGAGTAG
Protein Sequence
MIMLFKGNSSRLEHLIEKIQANKENHDVTTEDIKEALGSVGSAAGSSWPSSTPEPSPSPASTPSADAADADAEPPFTLGATEHTPYQCQFCDKAFPRLSYLKKHEQTHSDQMPFRCEFCSRLFKHKRSRDRHVKLHTGDRKYRCAHCESAFSRSDHLKIHMKTHDNQKPFQCTVCNRGYNTAAALTSHMQGHKRDREGREPDRRRAMRCLRCGEAFRRPDLLQAHMASAHGVDAAALTPPRRVASQPPPTLLACMYCTRDTFTSMEQLQLHVRATHAALLNGEVMVDQPAPTDLSRRASDDASPAKRPRSGSGTPQTTLSPNTLLCNQCDAALPDFEAFRAHLKGHLEEGGELTRTSPAPCVHCGATFADAAASERHLTAHYLAVSCEYSCHSCARSFPTPDDLQKHLLDLHAHHLYRCSLCKEIFDSKVAIQVHFAVAHSGENKVWVCRGCGSSAGALRSEADGIAHVRARHGGARCSCGALLGGPRLRPRAYRCPVPTCSDAFAVQYLLERHMQVHHAMAQQVLNGELTRPKRVENNNSTDADGTCSPCTTTEPAPTDERRRKNGAVALQCAYCGERARSRAELEAHTRAHSGASAARHKCLICDEILPSAAVLAEHKLTHCKVIAGDTCSRCRARLVSEESFLSHMARHHPALPAPCVVCRQTLASEAEARLHARFHLRPNEDEQRCAICLRALPEGEGGEGARACAACYARHSAPRAAPADHDCRLCRRALGSPTRLQAHLIEHTFAGIGAFTCYLCSAVFTSAAGLQRHLPEHASAPRPYDCARCGMKFFFRAELDNHAFVHLEEAEIAQRAFYEAYARGAASAWAALAPPEPQITPEVKQEPEIKEERNDEYIEVGSPPPPIPPQPTPPPVVKQEKPDEE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00635642;
90% Identity
iTF_01429280;
80% Identity
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