Basic Information

Insect: Epirrhoe tristata
Gene Symbol: -
Assembly: GCA_951394285.1
Location: OX596161.1:5153801-5156356[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 0.00055 0.037 15.0 2.3 1 23 144 166 144 166 0.98

2 16 1.5e-06 0.0001 23.0 1.6 1 23 172 195 172 195 0.95

3 16 0.79 53 5.0 1.9 2 23 203 224 202 224 0.94

4 16 1.2e-05 0.00079 20.2 3.3 1 23 231 253 231 253 0.98

5 16 1.2e-05 0.00078 20.2 2.6 1 23 260 282 260 282 0.97

6 16 1e-07 6.7e-06 26.7 2.1 1 23 288 310 288 310 0.99

7 16 2.1e-05 0.0014 19.4 4.0 1 23 316 338 316 338 0.98

8 16 1.6e-06 0.00011 22.9 1.0 1 23 344 366 344 366 0.98

9 16 6.4e-05 0.0043 17.9 1.9 1 23 372 394 372 394 0.98

10 16 3.3e-06 0.00022 22.0 0.1 1 23 400 422 400 422 0.97

11 16 8.9e-07 6e-05 23.7 4.8 1 23 428 450 428 450 0.98

12 16 1e-07 6.7e-06 26.7 0.3 1 23 456 478 456 478 0.98

13 16 0.00015 0.01 16.7 2.4 1 23 484 506 484 506 0.97

14 16 3.8e-07 2.5e-05 24.9 0.6 1 23 512 535 512 535 0.97

15 16 4.2e-06 0.00028 21.6 1.3 1 23 541 563 541 563 0.98

16 16 0.0029 0.2 12.7 4.2 1 23 569 591 569 591 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	0.00055	0.037	15.0	2.3	1	23	144	166	144	166	0.98
2	16	1.5e-06	0.0001	23.0	1.6	1	23	172	195	172	195	0.95
3	16	0.79	53	5.0	1.9	2	23	203	224	202	224	0.94
4	16	1.2e-05	0.00079	20.2	3.3	1	23	231	253	231	253	0.98
5	16	1.2e-05	0.00078	20.2	2.6	1	23	260	282	260	282	0.97
6	16	1e-07	6.7e-06	26.7	2.1	1	23	288	310	288	310	0.99
7	16	2.1e-05	0.0014	19.4	4.0	1	23	316	338	316	338	0.98
8	16	1.6e-06	0.00011	22.9	1.0	1	23	344	366	344	366	0.98
9	16	6.4e-05	0.0043	17.9	1.9	1	23	372	394	372	394	0.98
10	16	3.3e-06	0.00022	22.0	0.1	1	23	400	422	400	422	0.97
11	16	8.9e-07	6e-05	23.7	4.8	1	23	428	450	428	450	0.98
12	16	1e-07	6.7e-06	26.7	0.3	1	23	456	478	456	478	0.98
13	16	0.00015	0.01	16.7	2.4	1	23	484	506	484	506	0.97
14	16	3.8e-07	2.5e-05	24.9	0.6	1	23	512	535	512	535	0.97
15	16	4.2e-06	0.00028	21.6	1.3	1	23	541	563	541	563	0.98
16	16	0.0029	0.2	12.7	4.2	1	23	569	591	569	591	0.98

Sequence Information

Coding Sequence: ATGACAATTACAACAGAAAGAGCCCTGACAGAGTTCTTCAAAAACAGTGTTGAGTTGAATGAAGAAACTTTTAACATGCTAAACACTGAGAGAAAACACAACTTCTCAATATCTATTGTTGAGCACACAGCTTGCAATGATTCCAATGGACTGAGGACTGTGAAGGAGGAACCAGAGGGCAATTATTTCgattttgatgatgatgatgaaataccCGTCAAAATTGAAGcTACAACTGTGTCAAAAAAGTCTGGAGGCAATAAAACAAAGCAAATAAATCTAAGAGGTATCAAAACTGAGAGCACTGAAACCTTTAAGAACAAAGGAGAGACAATCCagaatcaaaacaaaacatcttgcagaaataatagaaaaaatactgaaGAAAACAACAAAGAAATGAAAACACAAGATGATACAGACCTAAACTATTTTTGTCCGAAATGCAACAAAAGTCATGTCACCAAAAAAGCATTGGTTCAGCACATGAAGGTGCATGACCACAGCAGGCGCTATGTGTGTGACATATGCAAATACAGATTCAACACAAAATCCAACTTAAAAAATCACCAAGACAACTTGCACAGAACAGAAACTGAGACAGTTGAATGCACCGTCTGCCATAAACTGATGAACAGCTTACAGATCTTAAAACGACACATGAAAAGTCATTCAGATAAGGCAAAAACTTTCTCCTGCGATAAATGTGACCAAAAGTTCTCTTATAAAAGCACATTAGTACGACATCGGACAACGCACATAGATAATAATGCTAGGCACAGTTGTCCAATATGCAAGAAAACTTTCTCagtgatttattatttaaaaagtcatATGAAGCTTCACACTGGGACAAAACCTTATTCTTGCGAAAGATGCGGGAAGGCGTTTACTCTGAACAGTCATTTAACGATTCATATGAGAACGCACACAGGGGAACGACCATACATGTGCAGCAAATGTGATAAAAAGTTTTCCAGCTTAGCTCATGTTAAATACCATATGAAAATGCACACAGGAGAGAAGGGTTACGCTTGCGATGTATGCCAGAAAGCGTTCTCAGAAAGTAGTCACTGGAAGAGTCACATGAGAATTCATTCTGGCGAGAAACCTTATGCATGCGATATGTGTGATAAAAAATTCATAGGTCACACAAACTTGAAGTTACATAAAAGAATTCACACAGGTGTGAAGCCCCATGTGTGTGATGTTTGCGGTAAAGCGTTCGCGCAAAAGTCCGTTTTGATAATACACGTCAGAAGTCATACAGGGGAGAAACCATTCGCTTGTCATCGTTGCGGGAAAACCTTCAGCATGTCAGCGCATTTGAAAACACACATACGAACTCACACGGGAGAAAAGCCGTACGCATGCGAAATATGCGGTAAAACGTTTGCGGAAAACGCCCGTCTTAAACGCCATATGAGAACGCACACGGGAGAAAAACCGTACGACTGTTCAATGTGCGACAAATCCTTCGCAGACTACACGAATTTGAAGTGTCATATGGTCACACATACAGGGGAGAAGCCGTACGCTTGTGACCGGTGCGGGAAAACATTTACACAACAGGGCACAATGAAGAAACACATCCGTATAGTCCATCTTAAAGAAAGGCCTTATGCCTGTGAAATGTGCCCCAAGACTTATACCAAAAGCCATGCTCTGAAAATACATGTTAGAACGCATACGGGAGAAAGACCATATAATTGTAGTAAATGCAGTAAAGCATTCACTAGCCATGAGATAATGAAGCGACATTTGAAAACCCACGGCGAGGGATATGATAAATGTGATGCGGGCGAAAGTGTGATGATGGATGGAGTTGCAGATCACTCTATAAAATGA
Protein Sequence: MTITTERALTEFFKNSVELNEETFNMLNTERKHNFSISIVEHTACNDSNGLRTVKEEPEGNYFDFDDDDEIPVKIEATTVSKKSGGNKTKQINLRGIKTESTETFKNKGETIQNQNKTSCRNNRKNTEENNKEMKTQDDTDLNYFCPKCNKSHVTKKALVQHMKVHDHSRRYVCDICKYRFNTKSNLKNHQDNLHRTETETVECTVCHKLMNSLQILKRHMKSHSDKAKTFSCDKCDQKFSYKSTLVRHRTTHIDNNARHSCPICKKTFSVIYYLKSHMKLHTGTKPYSCERCGKAFTLNSHLTIHMRTHTGERPYMCSKCDKKFSSLAHVKYHMKMHTGEKGYACDVCQKAFSESSHWKSHMRIHSGEKPYACDMCDKKFIGHTNLKLHKRIHTGVKPHVCDVCGKAFAQKSVLIIHVRSHTGEKPFACHRCGKTFSMSAHLKTHIRTHTGEKPYACEICGKTFAENARLKRHMRTHTGEKPYDCSMCDKSFADYTNLKCHMVTHTGEKPYACDRCGKTFTQQGTMKKHIRIVHLKERPYACEMCPKTYTKSHALKIHVRTHTGERPYNCSKCSKAFTSHEIMKRHLKTHGEGYDKCDAGESVMMDGVADHSIK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00661530;
90% Identity: iTF_00661530;
80% Identity: -