Etri016650.1
Basic Information
- Insect
- Epirrhoe tristata
- Gene Symbol
- sip1
- Assembly
- GCA_951394285.1
- Location
- OX596155.1:3280772-3288291[-]
Transcription Factor Domain
- TF Family
- GCFC
- Domain
- GCFC domain
- PFAM
- PF07842
- TF Group
- Unclassified Structure
- Description
- This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.2e-53 1.5e-49 169.5 3.5 4 230 370 578 367 598 0.94 2 2 2.8e-07 0.0034 17.5 5.1 158 275 735 846 600 846 0.76
Sequence Information
- Coding Sequence
- ATGTCTGACGATGAGGTTATTCGCTTCGAAATCACAGATCATGATTTGGACAATGAATTTAACTTCAATAGACCCCGAGGGAAAAACAAGAAGGAGCACCAAATATACGGTATGTGGGCTAAAGATAGCGACGAAGAAGACAATGAGGATAACGTGCGCAAAAGGACTAGAAAACCTAAAGATTATTCAGCGCCTATAGGTTTTGTTATGGGAGGTGTACAACAGGCAGGcaagaaaaaagaagaaaaaaaagAATTAGAATCAACTGAAGCCTCCACATCCCGACCTAAGTTTGCACCAGACAGCTCTGATGAGGAACAGCCGAGTACTCCCCTGGAGAGTGAAACGGCTGGCATCCGGAGAAAGGGACAGGGCATGAGGCAGGCCAGCCTCGGTGGCAATGTTGGCAACTGGGAGAAACATACTAAGGGTATCGGTGCCAAATTGTTGTTACAGATGGGTTATAAACCGGGCATGGGTCTTGGTAAAGATCTTCAAGGAATTTCAGCGCCTGTGGAGGCCACTGTGAGAAAAGGGAGAGGTGCTATCGGAGCTTATGGACCCGAGAAAGCAGCTCAAAAAGCGAAAAAAGAAGAGGAGAAACGCCTGAAGGAGAAAGAAGAGCAAGAGAAGGAGACAACAGAGAAGTCATACAACTGGAAGAAGTCTCACAAAGGGCGCTACTTCTACAGAGACTCTGAAGATGTTATACAAGAGGGTAAACCCACGATGCATACTATGACCAGTAGTTCCTTGGCCCGTGTACCTGTGATAGATATGACGGGCCGAGAGAAGCGAGTGCTAAGCGGCTACCACGCGTTACGCGCCGCCGCACCCCGTTTCGAGCACGAGCCTAGAAGGAAATGTGAGCACTTTGCGGCGCCAGAACTCGCTCATAACTTAGCTTTGATGGTGGACTGCTGTGAACAGGACATTATCCAAAACGCCCGAGACCTGACCACAGCAGAGGATGAAATGGTTGTACTCGAGCGAGACTTGAAAGAATGCGAAATTAATATTGAAGAACAAGATGAGATTATCGCCAAAGTGCAGGCGATATTACAGCGGGTGGAAGCGCTGAATCGTCCGGATCTATCGCTTGAAGCGGCTTACGAAGTTTTAGCTAATTTGAAGGAATCATACCCAATGGAGTACGAAATGTTCGGCCTTGGCTCAATAGCTGGCAATATTGTCAGTCCTTTACTAAGCGCGCTCCTAGCGCCGTGGCAGCCATTGGAAACTCCCGACGAGCCAATACCCACGTTTAGAAAATGGCGGCCATTGTTAACAGACGAGGCGTATACTAGTTTGCTGTGGCAACATTTTATGCCGCATCTTACTACTGCTTCAGaattATGGAACCCCAGGGTCCCCGAACCAATGCTTCGCGCAGTAACCGCATGGAACGAGATCTGTCCCCCTTGGGTGGCCAGCGAAGTACTGACCCGTTGCGTAGTCCCTCGAGTGCTGGCAGCCGTGCGGACCTGGGACCCCACGCACGACACCCAGCCCGTGCACTGCTGGGTGCTGCCTTGGCACGAGCTGGCAGGCACTGTATTAGCCACAAGCGTGTATCCTCTAATCCGGTCGCGGCTATGCAGCGCTTTAGCAGCGTGGCATCCAAGCGACGCGTCAGCTTTGGGCGTCTTAGGCGCCTGGAGGGACGCCTGGCCCGGGGCACTACCGGCACTACTGCACCACCACGTGTCGCCCAAGCTGGAGCACGCGCTCCATCTGCAGCACATCCACCTGCTGCCCGCAGACACCGGTATGTACCCGCAGACACGTGCACTACCGGCACTACTGCACCACCACGTGTCGCCCAAGCTGGAGCACGCGCTCCATCTGCAGCACATCCACCTGCTGCCCGCAGACACCGGTATGTACCCGCAGACACGTGCACTACCGGCACTACTGCACCACCACGTGTCGCCCAAGCTGGAGCACGCGCTCCATCTGCAGCACATCCACCTGCTGCCCGCAGACACCGGTATGTACCCGCAGACACGTGCACTACCGGCACTACTGCACCACCACGTGTCGCCCAAGCTGGAGCACGCGCTCCATCTGCAGCACATCCACCTGCTGCCCGCAGACACCGGTATGTACCCGCAGACACGTGCACTACCGGCACTACTGCACCACCACGTGTCGCCCAAGCTGGAGCACGCGCTCCATCTGCAGCACATCCACCTGCTGCCCGCAGACACCGGTATGTACCCGCAGACACGTGCACTACCGGCACTACTGCACCACCACGTGTCGCCCAAGCTGGAGCACGCGCTCCATCTGCAGCACATCCACCTGCTGCCCGCAGACACCGGTATGTACCCGCAGACACGTGCACTACCGGCACTACTGCACCACCACGTGTCGCCCAAGCTGGAGCACGCGCTCCATCTGCAGCACATCCACCTGCTGCCCGCAGACACCGCCCCTGCATGGCAATGGTGTACTGAGTGGATAGACTTGCTGGGAGCGCCCACTATAGCGGCAATAGCTAGTCGTGCATTGTTACCTCGCTGGCTCGCTGCATTGGCCGCCTGGCTTAACACCAACCCACCACACGCTACCGTGCTCAACTCTTACACGGATTTTAAGAAAACCTTCCCCGAAGAGATTCTAAAAGAGCCGGTGGTTCGCGACGCGTTCCGTAAAGCACTCGACATGATGAATCGAAGCACAGACATCGACACCGTCGAAGCCCCTCCCCCGCCCCGTTTCACCCCGCTCGACCCTAAGGAAACTTCCAGAATCGTCGACTCACTTTCCTCAACCACACAGCAGAAATCTTTCTCAGAACTACTCGAATCACGTTGCGTGGAAAAAGGTATTACTTTTGTACCTATCGTGGGCAAGAACAGAGAAGGAAgacctatttataaaattggtgATAAACAGTGCTATGTTATAAGAAATGTTATTATGTATTCGGAGGATTCTGGAAGGAATTTCGCGCCGATTGCGATAGATAGATTGTTGAATATGGTTGAAgagtaa
- Protein Sequence
- MSDDEVIRFEITDHDLDNEFNFNRPRGKNKKEHQIYGMWAKDSDEEDNEDNVRKRTRKPKDYSAPIGFVMGGVQQAGKKKEEKKELESTEASTSRPKFAPDSSDEEQPSTPLESETAGIRRKGQGMRQASLGGNVGNWEKHTKGIGAKLLLQMGYKPGMGLGKDLQGISAPVEATVRKGRGAIGAYGPEKAAQKAKKEEEKRLKEKEEQEKETTEKSYNWKKSHKGRYFYRDSEDVIQEGKPTMHTMTSSSLARVPVIDMTGREKRVLSGYHALRAAAPRFEHEPRRKCEHFAAPELAHNLALMVDCCEQDIIQNARDLTTAEDEMVVLERDLKECEINIEEQDEIIAKVQAILQRVEALNRPDLSLEAAYEVLANLKESYPMEYEMFGLGSIAGNIVSPLLSALLAPWQPLETPDEPIPTFRKWRPLLTDEAYTSLLWQHFMPHLTTASELWNPRVPEPMLRAVTAWNEICPPWVASEVLTRCVVPRVLAAVRTWDPTHDTQPVHCWVLPWHELAGTVLATSVYPLIRSRLCSALAAWHPSDASALGVLGAWRDAWPGALPALLHHHVSPKLEHALHLQHIHLLPADTGMYPQTRALPALLHHHVSPKLEHALHLQHIHLLPADTGMYPQTRALPALLHHHVSPKLEHALHLQHIHLLPADTGMYPQTRALPALLHHHVSPKLEHALHLQHIHLLPADTGMYPQTRALPALLHHHVSPKLEHALHLQHIHLLPADTGMYPQTRALPALLHHHVSPKLEHALHLQHIHLLPADTGMYPQTRALPALLHHHVSPKLEHALHLQHIHLLPADTAPAWQWCTEWIDLLGAPTIAAIASRALLPRWLAALAAWLNTNPPHATVLNSYTDFKKTFPEEILKEPVVRDAFRKALDMMNRSTDIDTVEAPPPPRFTPLDPKETSRIVDSLSSTTQQKSFSELLESRCVEKGITFVPIVGKNREGRPIYKIGDKQCYVIRNVIMYSEDSGRNFAPIAIDRLLNMVEE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -