Basic Information

Insect: Epirrhoe alternata
Gene Symbol: -
Assembly: GCA_963565295.1
Location: OY751377.1:9635118-9642002[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 20 1.8 1.2e+02 4.0 0.4 1 23 54 77 54 77 0.95

2 20 0.95 64 4.9 4.3 1 23 84 107 84 107 0.97

3 20 5.4 3.6e+02 2.5 3.9 1 23 181 203 181 203 0.97

4 20 0.0021 0.14 13.3 1.0 2 23 209 230 208 230 0.97

5 20 2.6 1.7e+02 3.5 1.5 1 23 236 258 236 259 0.94

6 20 0.23 16 6.8 2.9 2 22 484 504 483 504 0.95

7 20 0.65 44 5.4 0.4 2 23 756 777 755 777 0.96

8 20 0.077 5.2 8.3 3.3 3 23 849 869 847 869 0.96

9 20 0.037 2.5 9.3 0.5 1 23 877 899 877 899 0.97

10 20 0.2 14 7.0 3.4 1 23 937 959 937 959 0.95

11 20 0.00029 0.019 15.9 4.0 1 23 968 990 968 990 0.99

12 20 0.31 21 6.4 2.2 1 23 1071 1093 1071 1093 0.98

13 20 0.017 1.1 10.4 1.2 1 23 1149 1171 1149 1171 0.95

14 20 1.8 1.2e+02 4.0 0.1 2 20 1178 1196 1177 1199 0.92

15 20 0.0081 0.54 11.4 0.8 1 23 1268 1290 1268 1290 0.94

16 20 0.017 1.2 10.4 0.9 1 23 1296 1318 1296 1318 0.95

17 20 0.0081 0.55 11.4 2.6 1 23 1407 1429 1407 1429 0.97

18 20 0.0002 0.014 16.4 1.4 1 23 1435 1457 1435 1457 0.99

19 20 2.3 1.5e+02 3.7 2.0 1 23 1547 1569 1547 1569 0.96

20 20 0.02 1.3 10.2 2.2 1 23 1587 1609 1587 1609 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	20	1.8	1.2e+02	4.0	0.4	1	23	54	77	54	77	0.95
2	20	0.95	64	4.9	4.3	1	23	84	107	84	107	0.97
3	20	5.4	3.6e+02	2.5	3.9	1	23	181	203	181	203	0.97
4	20	0.0021	0.14	13.3	1.0	2	23	209	230	208	230	0.97
5	20	2.6	1.7e+02	3.5	1.5	1	23	236	258	236	259	0.94
6	20	0.23	16	6.8	2.9	2	22	484	504	483	504	0.95
7	20	0.65	44	5.4	0.4	2	23	756	777	755	777	0.96
8	20	0.077	5.2	8.3	3.3	3	23	849	869	847	869	0.96
9	20	0.037	2.5	9.3	0.5	1	23	877	899	877	899	0.97
10	20	0.2	14	7.0	3.4	1	23	937	959	937	959	0.95
11	20	0.00029	0.019	15.9	4.0	1	23	968	990	968	990	0.99
12	20	0.31	21	6.4	2.2	1	23	1071	1093	1071	1093	0.98
13	20	0.017	1.1	10.4	1.2	1	23	1149	1171	1149	1171	0.95
14	20	1.8	1.2e+02	4.0	0.1	2	20	1178	1196	1177	1199	0.92
15	20	0.0081	0.54	11.4	0.8	1	23	1268	1290	1268	1290	0.94
16	20	0.017	1.2	10.4	0.9	1	23	1296	1318	1296	1318	0.95
17	20	0.0081	0.55	11.4	2.6	1	23	1407	1429	1407	1429	0.97
18	20	0.0002	0.014	16.4	1.4	1	23	1435	1457	1435	1457	0.99
19	20	2.3	1.5e+02	3.7	2.0	1	23	1547	1569	1547	1569	0.96
20	20	0.02	1.3	10.2	2.2	1	23	1587	1609	1587	1609	0.98

Sequence Information

Coding Sequence: ATGCTACAGCAGATGTCCTCGTCGCTGAGCGCGCAAGTCGGCGAGGTCACAACTATTGCGCGCCCGTTCGAAGGTCGCTTCTCCGTGGACGTCTCTTCGGAGGCCTCCTCGGACGCGGCTGAGGAGTTCGAACTCCCGCAGTGCAAGATAAGAAGGAACTATAACTGCGCGAAGTGCACGTATAATACTCAGAATCCGCGCGCTTATCTTGTTCACACGCGAGACGTTCACTTCGGAAGATTTAAGATTTACGAGTGCCAACATTGCATTTATGCCTCGAGACATCAACAGAAGCTCTTGAGACATACGAAGATGGTTCATGGGACGGTACCTTCGTCTTCGACCTCTAAAGTGGAGACCGAAGTCGCAACCAGCGAAAGCATCCCGGAAAACATGGAAGATCTGCTAGAAGAGATCGAAGAGTGTGATGATTCTCAGATGGAAATAGACGCGGACGAACAGCCCGAGCGAACCGAGGACGCAGAAGTGAGCGTCTCCAGAAACACCACTTCCGGTTTGCCGAAGGGAAAAGGGAAGTTCTTTTCCTGCGACAAATGCAACTACGTCACCCACATAAAAGCGAGATACACAAAGCACGTCAAGTATCACTCGATGCCGATGATCAAGTGCACGATGTGCGACTTCCGGACGCCGTACAAGTGGAACTTGGATCGGCACATGAAGAACCACGGCGGAAGCGGTAGTTTCGTGTGCTCCAAGTGTACGTTTACAGCGGACATCAAGCAGAGTCTGACGGTGCATGAGATGAATCACCACACGCCGCCCGTGGGCCAGTCGGCGGCGAGTCGTCGACGCAACCGGGTGGGGGCTAGCGACCTGGCGACCGCCGACTCACTGCCCAAGGAGGAGGAAGGGAGCGGCGACTCGCGATCCTCGCATTCTGTCTCGGACATCATGGGTTTGCAATACGCGGAGAGAGATATAGTAAGTTGCAACAGCGATTCCAATGATACAACGTCGAAGAACGACGAAGGCGATCAATCAATTCAAGGCACGCCCGGCCAGCAGTCACCCAACTCGGGGAACGAAGACAGAACTCAAAAGCAAAGTAAAAAGGCTCCAAGGCCTATCCCTCAACTAATCCCTCTTAACGCGTCTACCCCTAACACAAAGACAGGAGAACCACCTGCCAAGAAATTCAAAGATGCTTCGGAAATCACGAGCAAGTTCGATAACTTGCCCGTCGATATCACTTTAACTCCAGTTAACGCACCTAAAGAAACTGTTGTCCGGAAGAAGAATGAGTCGTTCTTCGACAAGTTGAAGGAAAGACTGCTAACGGAAACTGGAGAAGAAGGCTCTTTGAAGTGTAAAAGCTGCGGTTTCGAAAGCAAATGTCTGTCTGAACACTCCGTACATGAGAAAAACTGCGCAGCTCAAGCCAGTCGCGTCACGATGAGCGCATCACATTCCACCATGGGCTCTACTCGTTGCCAAAACTGCAGACATCGCTGCAAATCCAGCGCAGACTTGTACGTACACATGCTAACTTGCGGTAAGAAAGAAAACTCCCAAGCTACCGCAGAAACAAAACCAGCCAACACCGAAGCATCTACCTCAAGCTTAGAGAAAGACGCTGAACCGCACCCGATGGAGAATGTAGTATTCGTATGGAATAATATAAACCAGGACAGTAAATTCGAAAGACCTTTAGATATTAACATTCATGATGATTCAACAATGCCTGATTCGCAAAGAAATTATGACGCAGAATTAGTTGACGAGAACGAAGGCATGAATTTATCGCCAAACAGTTTGAGCCTTGgtaaaaatgtttacaaatGCTCAGATTGCAAGTTTTGGGCTGCTACCGCTTCTAGATTCCATGTCCATATCGTGGGACATTTGAACAAGAAGCCGTTTGAATGCTCTTTATGCAAGTACAAGTCTAATTGGCGCTGGGATATTACTAAACATATCAAATTGAAGTCTGCGCGAGACCCGGAGCATAATGAAGCTAAAGTTTTGATGACCGACGAGACTGGAAGGCGGAACTACAGCAAATATAACAAATTTTTGGCTGTTCCAGTCGTAAATGAAAACGGAGAAACTGAATTCCACTATGTTGACCAAAACGCAACAGCCGATGCGTCTATGGAGATGGACGAATCTCTAAATGATAACAATGAAATGATGAACACGTCTTATGAGATGCAACCGCTCAATTTGCAGACACAATTTGGTGATGTCAAGTATGGAGCGGAAAACACTAATCAGGATAAGAAACCGAAAAAGACAATGTGGAAATGCAAAAAGTGCAATTACAAAGACCCGTCGAAGGAGGCGTTGTTGGAGCACGTAAGGCAGCACTCGAAAGAAAGTGACGATTCTAAGAAGGCCGATGCGCCGGACCCCGCTGATCTGGCGTACCGATGCGGCCACTGCAACCAATTGTCCAACTGGAAACACGTCATACAGAGGCATTGTCGCTTGAAGCACGATGgaataataaaagtaatcaCCACTGTGAAGCCCAAAGCAGAAACTGTCGCTGCTACGAGCACAGAAACCTACAACGATTTTTGTACTAAGTGTCCCTTCAAAACTAACGACAAGAAACATCTCATGGACCATCTACAACAGCATCAACCCTCCTCACAATCCATTTTCAAGTGCTACTTCTGCCCTTACTTCGTGAAGGACGAACAGGATTTGATACAACATCTTTTGCTCCACGGGATTACAGACCCAGAAGACTACATCGCGAAAGCAATGGGCTGTCGATCTCCCCTACCTGAGACGTTGCTACACGAAGCTGTGGCGTCAAGCAGTGGCGCCACCAAACGCCACAAGTGCCAAGAATGCCCGTACGAAACAAATAGCAAATCCCAGTACATGTACCATGAACAATTCCATCGCACCACGTCCGCAGAAACCCCATACAAATGCCCCGAGTGTAACTACAGCGTGTCTAAAAGACATCTCCTTCACCAACACTTGAGGGTTCACGGGATTTTTTCGAAGAAAAACGAAAGTGAAGCGGAGCTAGAAGCATCAACGTCTAACCAAAAAGCAGACACATCTGATAGCTTCAGCGATGAAATACCGTTCGTATGGGTATCAGCGAGAAATGAATTCCACAAGATGTACAAATGTCGCTATTGTTCGTACGTCAACTCTCAGAAATGCAAGATACCGAACCATGAAAAGATACATTGTCTTGGATTTGAAAATAGCGAAGTGATAATATACAAGTGTTTAGAATGTAAATTTACGTGTGATAATGCCGGGAGACTGGCGGAACATTCCAAAAAGCATGGACTTTTGTACGGTCGCATCTACAGCAACGTTGAGGAAGACATTCCCGATGAAGATCAAATAACTAGACTCCGCAAAGTAATTGAACTTGAAAAGAGCGCTGCTACCGAAGATACTACAGCAGAAGACAACGCAGTATTTGACTGTAAAGAAATTAAAATCCTGTACTTCTGCCAGAAATGTCCTGCAAGATATTTCACTGAAAGTGAGCTAAAAGCCCATGAAAAATTCCATGACTTATCGCATGCTAATAAATGTAAGCACTGCGAATTCTCGGTCGCTGAAGAGGCTGATCTGGTCGCCCACCTGCCTGTGCACTCTGACGAGCACCACATAAGGACAAACATGCTAAAATTCATTCACAATTCACATTCTCTTTATACAGAGCCTCGACTGGAATCTAATCGCAATTCTGAATCACTGGACGTAAGCTGGTCTGTTGCCGTTAATTACAaaagtaatgaaaaaaatacgGAGACCCTACATAAGAAAAGCCCAGACACAAAACACACGCCCAAACAATACAGTTGCAAGGAATGCCCAGCTAAATTCTTCAAAAGTTCAGCGCTCACATACCACACGGGATTGCACGGTGGCGAAGGGGaacataaatgtaaaaaatgcaGCTACGCcgttaaaaatgttggtaattTAGCTAAACACGAGATATTGCACGAAAATGATAAGTCAGGAAATTGCGAATATGAATCGGGCGATGAtttagattttaaaaatattccaCTCTCAGGAACTGACTTGTTCCAAAGAAAGACTGAAGCTCAGAAGAGAGTATTGACTGATAAAGACAAATTGGTCAAACCAAACGATCATTTTCCGCCTGTGCTGCAAGCGGATCCTCAGTTTGGATACCTGATGCATGGAAATCCAGAATTTATCTATCCTACTTACCTGAAAAATGGCCGACAAAAAGAAAAACGATACAAATGCCACAAGTGCCCTTCAGCTTTCGAGAAACGCGAACAGTACAAAATACATTTATCGCTTCACGGCTCTAAACAGAGATACAAGTGCGAGTTATGCGATTACTCCGTAAAATATTACGCAAACTACGTTCAGCACATGCGAAAGCACCAGATGAATGACGAAGCCCAAGCCGAAAGGATGAAAGGGACCAATGGGGATCCTGAAAATCAAGAAGATGTTAAACAAGAAGAAAGCTCTGACAACATTAAACTTGCGATCAAAACGATGCCCAAAGGAACGCCTAAAACAGACTTCCAGCAATTCTCTATCAGAGATCAACAAACTCTACGATTGTTACAACTTAGGAGATCTATGAATAATGGTGGTAAAGATGCGGCCACAGCAGAAACATCGCCAGCGAAGGAGCGTAAATTGCACATGTGCCTTCTCTGCCCCTATACCAACCAGCGGCAAGACGCCTTGAGCAATCATTACAAAAGACATGACGAGACCGACAACCTCAATGAATGGCCCAGCTCGGGAATCCATGGCAGTCATAAATGTTCCTACTGTGACTTAGTAGTCGTGCAATCACATATCCTAAGAGAACATATTAAAACACATTTCAATTTCAACAAAGTTCTTACGCCGGAATGTTTCGTAGCAAATGACGATGTTAGTTTTACAATCTCAAAAGTGGATGAGGAGTGCGAACCCGTTGATCTCAAATTAGATATGAAAACTAAGATTTTACCGTGCAATGATGAAAAGATATTTGTCAAATTGAAAACTGGAGAACTTGTACTtgattaa
Protein Sequence: MLQQMSSSLSAQVGEVTTIARPFEGRFSVDVSSEASSDAAEEFELPQCKIRRNYNCAKCTYNTQNPRAYLVHTRDVHFGRFKIYECQHCIYASRHQQKLLRHTKMVHGTVPSSSTSKVETEVATSESIPENMEDLLEEIEECDDSQMEIDADEQPERTEDAEVSVSRNTTSGLPKGKGKFFSCDKCNYVTHIKARYTKHVKYHSMPMIKCTMCDFRTPYKWNLDRHMKNHGGSGSFVCSKCTFTADIKQSLTVHEMNHHTPPVGQSAASRRRNRVGASDLATADSLPKEEEGSGDSRSSHSVSDIMGLQYAERDIVSCNSDSNDTTSKNDEGDQSIQGTPGQQSPNSGNEDRTQKQSKKAPRPIPQLIPLNASTPNTKTGEPPAKKFKDASEITSKFDNLPVDITLTPVNAPKETVVRKKNESFFDKLKERLLTETGEEGSLKCKSCGFESKCLSEHSVHEKNCAAQASRVTMSASHSTMGSTRCQNCRHRCKSSADLYVHMLTCGKKENSQATAETKPANTEASTSSLEKDAEPHPMENVVFVWNNINQDSKFERPLDINIHDDSTMPDSQRNYDAELVDENEGMNLSPNSLSLGKNVYKCSDCKFWAATASRFHVHIVGHLNKKPFECSLCKYKSNWRWDITKHIKLKSARDPEHNEAKVLMTDETGRRNYSKYNKFLAVPVVNENGETEFHYVDQNATADASMEMDESLNDNNEMMNTSYEMQPLNLQTQFGDVKYGAENTNQDKKPKKTMWKCKKCNYKDPSKEALLEHVRQHSKESDDSKKADAPDPADLAYRCGHCNQLSNWKHVIQRHCRLKHDGIIKVITTVKPKAETVAATSTETYNDFCTKCPFKTNDKKHLMDHLQQHQPSSQSIFKCYFCPYFVKDEQDLIQHLLLHGITDPEDYIAKAMGCRSPLPETLLHEAVASSSGATKRHKCQECPYETNSKSQYMYHEQFHRTTSAETPYKCPECNYSVSKRHLLHQHLRVHGIFSKKNESEAELEASTSNQKADTSDSFSDEIPFVWVSARNEFHKMYKCRYCSYVNSQKCKIPNHEKIHCLGFENSEVIIYKCLECKFTCDNAGRLAEHSKKHGLLYGRIYSNVEEDIPDEDQITRLRKVIELEKSAATEDTTAEDNAVFDCKEIKILYFCQKCPARYFTESELKAHEKFHDLSHANKCKHCEFSVAEEADLVAHLPVHSDEHHIRTNMLKFIHNSHSLYTEPRLESNRNSESLDVSWSVAVNYKSNEKNTETLHKKSPDTKHTPKQYSCKECPAKFFKSSALTYHTGLHGGEGEHKCKKCSYAVKNVGNLAKHEILHENDKSGNCEYESGDDLDFKNIPLSGTDLFQRKTEAQKRVLTDKDKLVKPNDHFPPVLQADPQFGYLMHGNPEFIYPTYLKNGRQKEKRYKCHKCPSAFEKREQYKIHLSLHGSKQRYKCELCDYSVKYYANYVQHMRKHQMNDEAQAERMKGTNGDPENQEDVKQEESSDNIKLAIKTMPKGTPKTDFQQFSIRDQQTLRLLQLRRSMNNGGKDAATAETSPAKERKLHMCLLCPYTNQRQDALSNHYKRHDETDNLNEWPSSGIHGSHKCSYCDLVVVQSHILREHIKTHFNFNKVLTPECFVANDDVSFTISKVDEECEPVDLKLDMKTKILPCNDEKIFVKLKTGELVLD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01220230;
90% Identity: iTF_00662678;
80% Identity: -