Basic Information

Insect: Epirrhoe alternata
Gene Symbol: -
Assembly: GCA_963565295.1
Location: OY751402.1:1910875-1912725[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 0.062 4.2 8.6 2.5 1 23 49 71 49 71 0.97

2 14 5.4 3.6e+02 2.5 0.1 3 23 98 119 96 119 0.81

3 14 0.016 1.1 10.4 0.3 2 23 139 160 138 160 0.96

4 14 0.00031 0.021 15.8 8.0 1 23 165 187 165 188 0.95

5 14 0.016 1.1 10.4 5.6 1 23 193 216 193 216 0.94

6 14 0.033 2.2 9.5 1.7 2 23 219 241 218 241 0.93

7 14 0.015 1 10.5 1.8 1 23 323 346 323 346 0.97

8 14 0.0036 0.24 12.5 0.4 2 23 421 443 420 443 0.93

9 14 2.9e-05 0.002 19.1 0.5 3 23 450 471 448 471 0.95

10 14 0.00043 0.029 15.4 1.2 2 23 476 498 476 498 0.96

11 14 0.0018 0.12 13.4 0.3 1 23 503 526 503 526 0.97

12 14 0.0015 0.1 13.7 6.2 1 23 530 553 530 553 0.97

13 14 0.024 1.6 9.9 1.9 3 23 561 581 560 581 0.96

14 14 2.5e-06 0.00017 22.4 1.3 1 23 587 609 587 609 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	0.062	4.2	8.6	2.5	1	23	49	71	49	71	0.97
2	14	5.4	3.6e+02	2.5	0.1	3	23	98	119	96	119	0.81
3	14	0.016	1.1	10.4	0.3	2	23	139	160	138	160	0.96
4	14	0.00031	0.021	15.8	8.0	1	23	165	187	165	188	0.95
5	14	0.016	1.1	10.4	5.6	1	23	193	216	193	216	0.94
6	14	0.033	2.2	9.5	1.7	2	23	219	241	218	241	0.93
7	14	0.015	1	10.5	1.8	1	23	323	346	323	346	0.97
8	14	0.0036	0.24	12.5	0.4	2	23	421	443	420	443	0.93
9	14	2.9e-05	0.002	19.1	0.5	3	23	450	471	448	471	0.95
10	14	0.00043	0.029	15.4	1.2	2	23	476	498	476	498	0.96
11	14	0.0018	0.12	13.4	0.3	1	23	503	526	503	526	0.97
12	14	0.0015	0.1	13.7	6.2	1	23	530	553	530	553	0.97
13	14	0.024	1.6	9.9	1.9	3	23	561	581	560	581	0.96
14	14	2.5e-06	0.00017	22.4	1.3	1	23	587	609	587	609	0.99

Sequence Information

Coding Sequence: ATGAAATACTACAGCAAGAATAATTTACTTTCAGATGAAACGCCCGCCCTCCTGTCTGGCCGAAAAACGTCTCTGCGACTGAGGAAAAGCTTGAAAACGTTATTCGATAACACAACCATTTTCCCCTTCAAATTTTGTGAGACCCATGTTTGCTTCTACTGTAGCGCTTCTATAAGCGATTACGTAGAATTCAAAAAGCATACAAAGTCTCATGGCAAAAACAAAATACAGGCGTTGaaagaaattaaagaaaaaGCGGGATCTATTAAGGTTGATGTTTCAGAAATTGCGTGCGAGAGATGCGAGCAAGAATTCAAAACGTTTGAAGTGATTGTTGAACATCTGATAAACGAACATGGGTTGTTCTACGACAAAGAGACTAGTGACATCGTAGAATACAGGTTGATTGATTTACGCTGCACGCAGTGTGACGCACAGTTCCAAACATACAGAGATTTGGATGTTCACATCAACGATCATCGACATAACAGTTTTGTCTGTCATCATTGCGAACGAATTTTCACCAGAAAGAGTGATATCAGATCTCATATGTTTAAGCACCATCGATATGGAGGGTTCACTTGTAAACAATGTGGTATAGAATGTAGAAGTCGATTCAAATTACGAAAACATACAGAACACGCTCATATGACGCGATGCCACGTTTGTGGCGAGATATTTATGAACCTAAATAAAATGCTCAAACACTTTAAACTGGAACACCCTAATGACAATAATAAAACCTGCGGCTACTGCTTAATAGATTTCCATACTGTGCTCGGTTTGAAACAGCATTTGGTGAAATGCAAAGTGAGATTACCTTTACTATACAAAACTGAAAATGTAGTCATAGGCAGCAAAAATGCAAATACTTCAAGATCGCACGAACAAATTGTCCGTATCCGTGAAAACATTCAATGCGTTTTAAATATGTCCACCGCTGTACCATTCCGGTTTCGAGTCAAATTCTCTTGCTTCTACTGTTCCCAAAAGTATGATGATTATGAAGTGCTCAAACAGCATACACGTTCCGAACATCCTTTATGTGATATCAAGAGCAAATGCATGAAGACTTGTAAAGGGAAACGAACATTTGTCAGGGTAGATATTGCAGATCTCGCTTGCAAACTTTGTTCCGCGCCTATGCCAGATCTGGAGCATTTTATAGACCATGCGATAGCTAATCATGACGCGGACTACGATAAGTCAGTCAGCATTGAAACTTGCTTTGAGCCGTATCGTCTCGTCAAAGGCAACATCCAATGTCTGGAGTGCCCGAAAGTGTTCCGATATCTGAACACGATGCTGAGGCATTTCAATTTGGATCATAGCAATAATAATGTGATTTGCGATTACTGTGGCCGCGGATTCCGAAGTACAACCAATCTAAAAATGCATCTGCAGAACACGCATACTGGATCTGCTGAATGCAAGTTCTGTAATGCTAAGTTTAAAAACCGTTCTGTTCTCGTCCGCCACATGGCGAAAAGCCACAATGAGATGACTTTCAAATGCCCCACCTGTTCGGAAATGTTCGCATCTGCGTACAAACGCCAGATCCATCTAATCAAAGTCCACGGAATAGGACATAAATGTGAATACTGTGGGAAAATGTTTACAAAGCATTCGTTTATGGATTCCCATGTCAGACGAACGCATTTAAAGGAAAAGAACGTTGCTTGCTCGATTTGCAATGATAAGTTCTTTGACAATCATTTGTTGAAGATGCATATGGTTAAGCATGATGGTGAGAGGAAGTTTAAGTGTGAGTTGTGCGGCAAAGCGTTTTTGAGGCAGAAGAATTTACGGACTCATATGGACACCCATAAAAAATATGGCTTTGTGCAGTGA
Protein Sequence: MKYYSKNNLLSDETPALLSGRKTSLRLRKSLKTLFDNTTIFPFKFCETHVCFYCSASISDYVEFKKHTKSHGKNKIQALKEIKEKAGSIKVDVSEIACERCEQEFKTFEVIVEHLINEHGLFYDKETSDIVEYRLIDLRCTQCDAQFQTYRDLDVHINDHRHNSFVCHHCERIFTRKSDIRSHMFKHHRYGGFTCKQCGIECRSRFKLRKHTEHAHMTRCHVCGEIFMNLNKMLKHFKLEHPNDNNKTCGYCLIDFHTVLGLKQHLVKCKVRLPLLYKTENVVIGSKNANTSRSHEQIVRIRENIQCVLNMSTAVPFRFRVKFSCFYCSQKYDDYEVLKQHTRSEHPLCDIKSKCMKTCKGKRTFVRVDIADLACKLCSAPMPDLEHFIDHAIANHDADYDKSVSIETCFEPYRLVKGNIQCLECPKVFRYLNTMLRHFNLDHSNNNVICDYCGRGFRSTTNLKMHLQNTHTGSAECKFCNAKFKNRSVLVRHMAKSHNEMTFKCPTCSEMFASAYKRQIHLIKVHGIGHKCEYCGKMFTKHSFMDSHVRRTHLKEKNVACSICNDKFFDNHLLKMHMVKHDGERKFKCELCGKAFLRQKNLRTHMDTHKKYGFVQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01336230; iTF_01528541;
90% Identity: -
80% Identity: -