Basic Information

Insect: Epirrhoe alternata
Gene Symbol: -
Assembly: GCA_963565295.1
Location: OY751378.1:2759487-2767455[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 31 0.013 0.89 10.7 4.6 1 23 198 221 198 221 0.93

2 31 0.0003 0.02 15.9 0.2 3 20 258 275 256 277 0.93

3 31 0.00016 0.011 16.7 0.3 2 23 311 333 311 333 0.97

4 31 0.76 51 5.2 0.2 2 20 351 369 350 371 0.90

5 31 0.033 2.2 9.5 3.3 1 23 381 404 381 404 0.97

6 31 0.0053 0.36 12.0 0.1 1 23 428 450 428 450 0.96

7 31 0.0034 0.23 12.6 2.3 2 23 496 517 496 517 0.97

8 31 0.00024 0.016 16.2 2.0 2 23 562 584 562 584 0.97

9 31 8.1e-05 0.0054 17.7 1.9 1 23 634 657 634 657 0.97

10 31 0.00033 0.022 15.7 0.1 1 23 712 734 712 734 0.97

11 31 0.00039 0.026 15.5 6.8 1 23 745 767 745 767 0.98

12 31 0.063 4.3 8.6 1.1 2 23 779 800 778 800 0.96

13 31 0.005 0.34 12.0 0.9 1 23 810 832 810 832 0.98

14 31 0.92 62 4.9 4.1 1 23 861 883 861 883 0.92

15 31 0.0063 0.42 11.7 7.8 1 23 894 916 894 916 0.98

16 31 0.0021 0.14 13.2 1.2 1 23 924 946 924 946 0.96

17 31 0.00031 0.021 15.9 0.2 2 23 966 988 965 988 0.97

18 31 0.0089 0.6 11.3 1.5 1 23 1006 1028 1006 1028 0.97

19 31 0.25 17 6.7 0.8 2 23 1069 1091 1068 1091 0.90

20 31 0.0023 0.16 13.1 0.2 2 23 1114 1135 1113 1135 0.95

21 31 1.6 1.1e+02 4.2 0.3 2 20 1139 1157 1138 1159 0.86

22 31 0.15 10 7.4 1.6 2 23 1178 1200 1177 1200 0.96

23 31 0.022 1.5 10.0 0.6 2 23 1216 1237 1215 1237 0.94

24 31 0.086 5.8 8.2 3.7 5 23 1247 1265 1245 1265 0.94

25 31 0.0014 0.095 13.8 1.4 2 23 1276 1298 1275 1298 0.95

26 31 3.1 2.1e+02 3.3 6.9 2 23 1315 1333 1315 1333 0.93

27 31 3.6 2.4e+02 3.0 2.1 2 20 1337 1355 1336 1357 0.92

28 31 0.53 36 5.7 2.9 2 23 1405 1426 1404 1426 0.93

29 31 0.0044 0.3 12.2 0.3 2 23 1437 1459 1436 1459 0.97

30 31 0.34 23 6.3 0.8 2 23 1475 1493 1474 1493 0.80

31 31 0.4 27 6.1 4.0 2 20 1497 1515 1496 1517 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	31	0.013	0.89	10.7	4.6	1	23	198	221	198	221	0.93
2	31	0.0003	0.02	15.9	0.2	3	20	258	275	256	277	0.93
3	31	0.00016	0.011	16.7	0.3	2	23	311	333	311	333	0.97
4	31	0.76	51	5.2	0.2	2	20	351	369	350	371	0.90
5	31	0.033	2.2	9.5	3.3	1	23	381	404	381	404	0.97
6	31	0.0053	0.36	12.0	0.1	1	23	428	450	428	450	0.96
7	31	0.0034	0.23	12.6	2.3	2	23	496	517	496	517	0.97
8	31	0.00024	0.016	16.2	2.0	2	23	562	584	562	584	0.97
9	31	8.1e-05	0.0054	17.7	1.9	1	23	634	657	634	657	0.97
10	31	0.00033	0.022	15.7	0.1	1	23	712	734	712	734	0.97
11	31	0.00039	0.026	15.5	6.8	1	23	745	767	745	767	0.98
12	31	0.063	4.3	8.6	1.1	2	23	779	800	778	800	0.96
13	31	0.005	0.34	12.0	0.9	1	23	810	832	810	832	0.98
14	31	0.92	62	4.9	4.1	1	23	861	883	861	883	0.92
15	31	0.0063	0.42	11.7	7.8	1	23	894	916	894	916	0.98
16	31	0.0021	0.14	13.2	1.2	1	23	924	946	924	946	0.96
17	31	0.00031	0.021	15.9	0.2	2	23	966	988	965	988	0.97
18	31	0.0089	0.6	11.3	1.5	1	23	1006	1028	1006	1028	0.97
19	31	0.25	17	6.7	0.8	2	23	1069	1091	1068	1091	0.90
20	31	0.0023	0.16	13.1	0.2	2	23	1114	1135	1113	1135	0.95
21	31	1.6	1.1e+02	4.2	0.3	2	20	1139	1157	1138	1159	0.86
22	31	0.15	10	7.4	1.6	2	23	1178	1200	1177	1200	0.96
23	31	0.022	1.5	10.0	0.6	2	23	1216	1237	1215	1237	0.94
24	31	0.086	5.8	8.2	3.7	5	23	1247	1265	1245	1265	0.94
25	31	0.0014	0.095	13.8	1.4	2	23	1276	1298	1275	1298	0.95
26	31	3.1	2.1e+02	3.3	6.9	2	23	1315	1333	1315	1333	0.93
27	31	3.6	2.4e+02	3.0	2.1	2	20	1337	1355	1336	1357	0.92
28	31	0.53	36	5.7	2.9	2	23	1405	1426	1404	1426	0.93
29	31	0.0044	0.3	12.2	0.3	2	23	1437	1459	1436	1459	0.97
30	31	0.34	23	6.3	0.8	2	23	1475	1493	1474	1493	0.80
31	31	0.4	27	6.1	4.0	2	20	1497	1515	1496	1517	0.94

Sequence Information

Coding Sequence: ATGGCCCTCAAACTCGGAAAATGCAGGCTCTGTCTCAAGCTCGGTGATTTCTATTCCATCTTTACGGTGGATAATGATGTGCAACTGTCGGAAATGGTTATGGAATGTTCCAGGATAAAGGTATACGATGGGGACGGACTACCTGATAAAGTCTGCGCAGAATGCATACAGAAACTTAGCAGCGCCTACATATTCAAGCAGCAATGCGAGAGGTCTGATCAGGAGTTGCGGCGGAACTATGTTCCACCTCCAGGGTTCAGTGTAAGTCCACCACCGCCAATAAATCGACAAAGTAGCGACTCTGCCTTCTCCACTCAAACAGACAGCTCAAATTTAAAGTCCTCCTTTGCTGAAAACAAAGTAACACCTATCAGTAGGAACCGAAAAAGAAGCGCCGAGAGTGACAATGCCTCTGTCGGCAGCCGGTCTCAAGAATACAGTAGGCCCAGCAGTTCTAAGCGCGTGGAGGAACTTCGCAAGTCTCAGAAACCAAAACGGCCGCGATACTCCGCCGACTCCGACTACGAAGACAATGGAGTTTCCAGCTTCATCAACGAAACAGACTCGGACGAACCTCTGAAGAAAAATGAACACACCTGTCCTCACTGCCCTAAGACCTTCAAATGGCTAAAGAGCTTGAGAATACACATAGCTCACAAACACTCTGAAAAAAAGGAACACTCTGAAAAAAAGGTGAATATAAAACCTGAGGTGCTGGTCAACATTCCAATAAAGTCGATGGAATCACCCAACAATGAGGATCAGATGGACTGCGAGAAATGTGGGAAAAGTTTCAAACTCAAAATTATGCTGAAACGTCATCAAGCCATTTGTCAAAAGTCACCATTGAAAACAGACAAATCGCCAATGAAGGAGCTCGTGATAACATTGGAACCGATAGACGCGGTGCCACCACGCACCAAGAAACCTACCTGCGAGTACTGCACTGCTCAGTTCAAAACTATAGATAACCTGGAGAAGCATCTCAGAGTAGTCCACGCAGCGACACGGAAGAAAGATAAAGCTGAGAATGAAGCCAAAGGTTCCCTGATATGCCTATACTGCTCCAAAGACTTTGCAGATTATTATCTGTATAGTTCACATTTCAACGGTTGTCCGATGAAGGAGAACTTATCCTCCTACCAATGCCCGATGTGCTTGAAGGTTTGTAATCGGGTGAACCATTACGTGAACCACGTAAAGAGTATGCACTACCTTTCATCGGGAAAGGTGGAGCCGACTGCGGATCAGACGAGCTCACCGGCGCAGGCTGACCAATCCTTCGAGTGCCGGATGTGTAGCAAGAAGCTGGCAACACAGGCGTTGCTGATAAAGCACTTGGCTGCGCACATGTCCGTCGAAGATGATGACAACGCAACCATGGAAGATGATGACTTTGACTCAAGAGATGATACGGTAGCTGATGACTCGATATCAGTGCAATCCGGGCAGAGTTCGCAAGCCTCACATGCCTCCGGCCCCGCCAAGTGCCGCTTCTGCGACAAGGAGTTCACTTACAGGAAGTCACTCATCTCACACGAACTGAAACACACAGAGGAAAAAGTCTCTGTGAAAATTGAGCCACCGGACAAAACTCCTCAAGCCGACCTCCTCAAAGAGACCAATCAGTTCGAAAACGAATACGACTCTGAATCTAGTCAAGATGAAGGGGAAGAGGACAATACGTGCGATATTTGCGAGAAGCAGTTCTCGTACAAACGGCTTTTGATACAACATAAACGCACGAAGCATACGATGGTAGCGGGAATGAAGCGAGCTAAAATAAGCCTTAAAGACTGCTCGGTGAGGTGCCTGATCTGTGAGGAGGAGATGAAAGTCAGTGCTATCAATGAACACAATCAGAAGCACATCTCTGTAAATATTCGGCCGAGGAATATTTACACTTGTGCGGAATGCTCGCAGAAGTTTAAGAGTTGCAGTAATTTAGCTAACCACATCAAGCTAGTGCATAGACTGAAACAGGCCGAGGTGCCGAAACAGTTTGTAGGTGTAGATATGGCGGATTTTTGTGAGGTCGTTGTGACAAAGGCGGAACCCCTGGACGAATCCCAGAGTCACAACGGCTATGGCGAGGTTCCCCTCAGTGCAGCGCCCACGGTGAATCTAACTGGCTTCACCTGCCCCATCTGTGGGAAGAAGATGCCCACGCTCGTGTCTCTTAAGCGGCATGTCAACTGGCACTCCTTTGTGGGCAATAATTTGGAGTCGAAACATGAATGCTTCGTTTGTAAAGAGACCTTCAAATTCAAGGGTCACTTCAAAATCCACATGAGGACTCACTACAAAGATACCAACCTAGACCCCTCATTCCTGACGTGTTCCATCTGCCAGCGGCGCAGTAAGCATCTTCGCGCTGCGCAGGCGCACATGAACTGGCACAAACAGACGCGCTTCCAGACCAAAGACTACCAGTGCTCTATATGCAAGCGCGTCTTCCAGTACCGCCGCGTATACCTCTCGCATATGGCGATACATTACAAGAAAGGAGAGAGCGGACAGAACACGATTGTCGGCGACAAGGTCCCGAATAACTTGGACCTGGCCACTTTCGATGGCACCTTCAGCTGCCAGCTCTGCGGCAAGGTCTGCGACTCGGAGAACTCATTGAAATGCCACACCAGCTGGCACAAGTCCAAGACTCTCCTGTACGGAGCGCGGCACGAGTGCCAGATGTGCCACCTCCAGTTCACGAATAAGCGGCATTTGGAGCTCCACACGCGCTCGCACTACGAAGACCCCAATGGAGAGTTCAAGTGCAATATCTGCGGAAAGGGATTCATCGACGAGGAGTACCATAGACGTCACGTGAAGGGGCACAACTTCGATAACCAATCTCACAAGAAGAGGATCGAAAATCTGAGAAAGGGGAAAGTCAAGTGTCCGATCTGCAACCGGTACTATCCGGACTTGGTGAAGTTGATCCGGCATCTGCGACGGACGCACCCCGAGAGCAAGATGATCAAGGAAGACCCCGACGCGCCGCCGCCGAAGTATTACTCGTGCAAGCTGTGCGCAAAAACATTCTATGACGAGAAACGATTGAAGAACCACGAAGAATCGCATCTCCGCAAGCCGAGCTTCCTCAAATGCAAGTTCTGCGGACACAAAACCATCTCCATGAAGGGACATCATATCCACATCAAGACGAAGCATATGACCAAGAAGTACGTGGATAATCCTCTAAAGTGCACGCAGTGTGACGAGGTATTCGTGTGGGGATATGCGCTGCATCACCACTTACGCGATGCGCACGGTATCAATGAGGACTGGATCGCAGAAAGGACGGAAGCCACGCTCGAAGGCCCCTTGAAGGACCTTCAATGTTCGATATGCCTGAAAGTTCTCGCCAGCAAAGGCAACTTCGAACGCCACATTGACTACCACAACACTCTGCGTTGTAACTACTGCTTCGAGTACTTCAGCACGCTTCGCTTCCTCGATGGCCATCTCGCCTACAGCTGCGATAAAAAGAAACTGGTTGGCGACACAGACCCACATCCTAAACGAGTCAAATGCGAGATATGCTACAAGGCCTTCAGCTTGCAAGTCAAACTGGACTGTCATCTGAGAACTCAGCACGATATCAAAGTGAACAGAGAGCAGTTGGTCGGTAAACAGGAGCTCGTCTGCGACTATTGCTTCAAAGTGTTCGAGAACGAACACGCCCTGAGCGGACATAAGATCTATCACCGCACTATCGGTTACTTCGGTTGCATTTACTGCCCGAAGAAATTCAACACTCAAACTGCGTACCGAAAGCATAAGAACCATCACTTTAGCGTGCACAACGTGGACAATCCGACGAAGTGCGAACATTGCGATGAGACCTTCGTGCAGTTCAGAGAGATGATCTACCACATGCGAGACGAGCACGGAGACGACAAGGAATGGATCGTCATGCCGAAGGATTCCATCGAAGAAACTTGCACAATCTGCCACAAGACTTTCTTCAATCTACACAAGCACATGGATTATCACGAGGAGAACAAATGCAAGAAATGCAACGAGTACTTCTTCTCGACGGTGGATTTCGATAACCACCTGTGCGCCATCGAGAGCGACGTCGAAGAGACGCCCGGGGTCGTCAGTCACGGATTGCCGTACGAAGAATGCACATTCTGCTTCAAACCCATCACAAAGAAAGATTCTAAGAAGAAACACGATATTCTTCACAGCACATCGGGTGCTATCTCCTGTCGGTTCTGCCATCTGAAGTTTAAAACCCTTGATGCGTTCAATATACACTCGTTCTCTCACCGCAGCAGAAAATACAACAAGAAACCGATCAAATGTCGCGTCTGCAAAGAACGTTTCGTGAAGTACGGTCCGTTCATAAAGCACATGAGGGTTGTGCACAAATGCGCTAAGAAGACGCACTACCGCGCGCTCGTGAAACCGGACCGCTGCGTCATATGCGGCAAGGAGTTCCCCAACCTGCACAACCATTACCGCGCCCATCTCGCCAACCAGTGCCAGTTCTGCTCCAAATACTTCACCTCCTCGAAACTCTTCGCGAAACACAAGTGCGATGTTATCGACGAGGACAGCTCCAAAGTCTTCATTTCAGATGAAAACTTGTCAGCGCTCATCAACTCTTACGTTCCTCGGGATCTTAAGGATGATGAGAAGTACTACGGGTATACTGATGATGACGAAGATGTCGAGACTGAATTGCCAATGGCGATAACTGCAGATAAAAAGGTGTACGGTCCTAGTAGAAAGAAGATAGTGAAGACGAGCCAAGAGGAAGAAATTGAGAGGAATTTGCACATGATGGTACAATCGCCGATTATATCCGATGTGCTTTCGTTGTACCAAAGTGAGGAGGCATTGCATGATAGCAAGATCGATTTGAATGATGTGGTCAATTTGACGGATGACGATTCTATGGATATGAATGATATAGCAGCACCTATAGTTGTGATTGATGATTGA
Protein Sequence: MALKLGKCRLCLKLGDFYSIFTVDNDVQLSEMVMECSRIKVYDGDGLPDKVCAECIQKLSSAYIFKQQCERSDQELRRNYVPPPGFSVSPPPPINRQSSDSAFSTQTDSSNLKSSFAENKVTPISRNRKRSAESDNASVGSRSQEYSRPSSSKRVEELRKSQKPKRPRYSADSDYEDNGVSSFINETDSDEPLKKNEHTCPHCPKTFKWLKSLRIHIAHKHSEKKEHSEKKVNIKPEVLVNIPIKSMESPNNEDQMDCEKCGKSFKLKIMLKRHQAICQKSPLKTDKSPMKELVITLEPIDAVPPRTKKPTCEYCTAQFKTIDNLEKHLRVVHAATRKKDKAENEAKGSLICLYCSKDFADYYLYSSHFNGCPMKENLSSYQCPMCLKVCNRVNHYVNHVKSMHYLSSGKVEPTADQTSSPAQADQSFECRMCSKKLATQALLIKHLAAHMSVEDDDNATMEDDDFDSRDDTVADDSISVQSGQSSQASHASGPAKCRFCDKEFTYRKSLISHELKHTEEKVSVKIEPPDKTPQADLLKETNQFENEYDSESSQDEGEEDNTCDICEKQFSYKRLLIQHKRTKHTMVAGMKRAKISLKDCSVRCLICEEEMKVSAINEHNQKHISVNIRPRNIYTCAECSQKFKSCSNLANHIKLVHRLKQAEVPKQFVGVDMADFCEVVVTKAEPLDESQSHNGYGEVPLSAAPTVNLTGFTCPICGKKMPTLVSLKRHVNWHSFVGNNLESKHECFVCKETFKFKGHFKIHMRTHYKDTNLDPSFLTCSICQRRSKHLRAAQAHMNWHKQTRFQTKDYQCSICKRVFQYRRVYLSHMAIHYKKGESGQNTIVGDKVPNNLDLATFDGTFSCQLCGKVCDSENSLKCHTSWHKSKTLLYGARHECQMCHLQFTNKRHLELHTRSHYEDPNGEFKCNICGKGFIDEEYHRRHVKGHNFDNQSHKKRIENLRKGKVKCPICNRYYPDLVKLIRHLRRTHPESKMIKEDPDAPPPKYYSCKLCAKTFYDEKRLKNHEESHLRKPSFLKCKFCGHKTISMKGHHIHIKTKHMTKKYVDNPLKCTQCDEVFVWGYALHHHLRDAHGINEDWIAERTEATLEGPLKDLQCSICLKVLASKGNFERHIDYHNTLRCNYCFEYFSTLRFLDGHLAYSCDKKKLVGDTDPHPKRVKCEICYKAFSLQVKLDCHLRTQHDIKVNREQLVGKQELVCDYCFKVFENEHALSGHKIYHRTIGYFGCIYCPKKFNTQTAYRKHKNHHFSVHNVDNPTKCEHCDETFVQFREMIYHMRDEHGDDKEWIVMPKDSIEETCTICHKTFFNLHKHMDYHEENKCKKCNEYFFSTVDFDNHLCAIESDVEETPGVVSHGLPYEECTFCFKPITKKDSKKKHDILHSTSGAISCRFCHLKFKTLDAFNIHSFSHRSRKYNKKPIKCRVCKERFVKYGPFIKHMRVVHKCAKKTHYRALVKPDRCVICGKEFPNLHNHYRAHLANQCQFCSKYFTSSKLFAKHKCDVIDEDSSKVFISDENLSALINSYVPRDLKDDEKYYGYTDDDEDVETELPMAITADKKVYGPSRKKIVKTSQEEEIERNLHMMVQSPIISDVLSLYQSEEALHDSKIDLNDVVNLTDDDSMDMNDIAAPIVVIDD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01170802;
90% Identity: iTF_00662426;
80% Identity: -