Ealt003519.1
Basic Information
- Insect
- Epirrhoe alternata
- Gene Symbol
- Paxbp1
- Assembly
- GCA_963565295.1
- Location
- OY751378.1:2724246-2739061[-]
Transcription Factor Domain
- TF Family
- GCFC
- Domain
- GCFC domain
- PFAM
- PF07842
- TF Group
- Unclassified Structure
- Description
- This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.0043 58 3.7 0.0 173 205 488 520 480 524 0.84 2 2 1e-14 1.4e-10 41.9 0.2 4 190 512 675 509 684 0.72
Sequence Information
- Coding Sequence
- ATGTTTCGTAAGCCGAAGAAGATCCAAAGACGTGTGTTCTGTGCTGACGACGATGACGATGGCGACCCGGAGCCCCCGCCGCCGCCTATCATTAGCCAGGAATCAGAGAAGAAGGAGAAGAGAGATAAGAAAGAGAATAAGCCTGTGAAGAGTGTGGCGCTCCTGAGCTTTGCAGACGAAGAAGAAGATTGTGAGGAATTCAAAGTGAAGAAATCTTCCCAGAGCAAGCGCCTGTCTAAACGCAGAGATAAGGAAAGAAAGCGATTGCCAGATGGTGATAGTAACAAATATGACAGTAACGGCCACGAGGATACAAACCACACTGAAACCGTTAAACCGAGGAAGAAAGTGACACTGGAGGGGCTGATTCTGTCCGGTCGGGAGGCGTTAGCGGCGGACGGGGCGGGGGATATATCTGAAGAGGAAGGGGAGGGGGACGATAGAGGGTTCCACACGTACCGCGCGGAGTCGGTCAGGGCGGCGCTGGCCGGCGCCTCGGGGCCAATCCCCGACGCTGCGCTCATACACGCCGCGCGCAAGACCAGACAGCAGGCTCGGGAATTAGGCGACTTCGTCCCGATCCAGTCGGAGCCAGAGAGTGGATCGCGGTTGGTAAGAGAAGGTGACGATTCCGCTGATGATGAAGAGGATCGTATACAAGTGAGGGGACTAGATATGCCCAGCGACAAGCCTCAGCGTGGCACAGCTGCAATAGACCCAGATGAGGAGAACAACAGTGAAGTGGAAGAATGGGAAGAGCAGCAGATCAAGAAGGCTATGCCAGCTATTGTTGATATTACAGGCGATAGCGGTATAGAGTTGAATCCGTTTGCGCTACCCCCCGCGCCGCCGCGATTACCCACCGCGCCACACTTGCGTCCACTCGCGGCGCCTGGCGCTTCTTCCGCCGCCGTCGGGCAACCTGCCTCCGCGCAACAGCTGCTCACTGCGCTCACTGAGAGGTTAGAAGAGCTGCAATTAGACAGAATCAACACGGGCATCAAACTGGATCACATCCAAAATCAGTTGGTGAAACTGGCGCAGATCCGTAAGAACCGCGCGGCGAGGCGGGCCGAGTTGGACGCGGCTTACAGACGCGCGCAGACCGCAAGGGGGTACCTAACTGATCTCATCGAGTGTCTTGATGAGAAGATGCCTGAGCTAGAAGCATTGGAGAGTCGAGCGTTGGCGCTGCAACGGAGACGTCACGACTTCTTGGTGGAAAGACGCCGTGCTGACGTCAGAGATCAGGCTCAAGATGTACTGGCTTTGGCAGCGCGTCCTGGAGCATCCCGCCCCCCCGACGGTCCGGAGAAGACGCGTCGCACGGCGGAGCGCGAggggcggcggcgcgcgcgccgGCTGCGCCGCGaggccgcgcccgccgcgcgaGCTCATCGCGACGGAGACTCCAGCGACGACGACCTGCCGCCCGACGAACATCACCACGCACAAGCTGAGAGAGAGAGTATCCGCGTAGCGGCGCGGGCGTTGTTCGCGGACGCACTAGAGGCGTGGCGTGCGTTGCGCGGCGTGTGCGGCGCTCTGGCCAGCTGGCGCAGCCGCGACCGCGCCGCCTACTGCGACGcacacctgcccgccgcgctgcccaagctgctggcgccgtacgtgagacaccagCTCATACTTTGGAATCCTTTGGCTGATGAAGACAACGAGGATTATGAGAAAATGGATTGGTACAATTGCCTAATGATGTACGGCGTGGGTACCCCCGAGGGCGGAGACGCGGAGGCTGCGGAGGACGCGGGGGCGGAGACTCCGCTAACGGAAAGCGCAGTCCGAGACGATCCAGATCTCATGCTGGTACCCACCATACTCAATAAGGTTGTACTGCCTAAGATTACAGAGCTAGTGGAACAAGCGTGGGACCCGATGTGCGTGCGCGCTTGCGTGCGCTTACGGCACGTGTTAGTGCGAGCCGCGGAGGCGCCCGGCGCCGCGCATGCGCTGAAACGGTTAGCCAATGCCGCTGCGCAGAGGATCGCTCAGGCGCTGAATGCTGATGTGTTTCTACCGGCTTTGCCGCCTGCTGTGATGGAGGGTCCAGGCGGTGCGTTCTGGCGTCGCTGCGTGGGCGCCGGCGTGCGGCTGCTGCGCGGGATGTTGGCTCTCACCGCGCCGCCTGCTCTGCTCAACAATGATGATAACGTACTCGCActtatagAAACATTATCTTGCGCATCCGGCGCGGCTCCGGGCCCCAGCATGGCGGGCGCATGCGCGGCATTGTGCGACACGctgccgcgcgccggccgcctgCGGCGCCGCGCGTTACTGCGGCTCGCGCGGCTAGCCGCACTCGCGCTCGCAAGGTTGCAGACTGACAACCCTCTACACATGAAAGCTATAGAACAAGCGCGAGCGGTGATAGCGGAGTCGAAAGCGATGGAGTGA
- Protein Sequence
- MFRKPKKIQRRVFCADDDDDGDPEPPPPPIISQESEKKEKRDKKENKPVKSVALLSFADEEEDCEEFKVKKSSQSKRLSKRRDKERKRLPDGDSNKYDSNGHEDTNHTETVKPRKKVTLEGLILSGREALAADGAGDISEEEGEGDDRGFHTYRAESVRAALAGASGPIPDAALIHAARKTRQQARELGDFVPIQSEPESGSRLVREGDDSADDEEDRIQVRGLDMPSDKPQRGTAAIDPDEENNSEVEEWEEQQIKKAMPAIVDITGDSGIELNPFALPPAPPRLPTAPHLRPLAAPGASSAAVGQPASAQQLLTALTERLEELQLDRINTGIKLDHIQNQLVKLAQIRKNRAARRAELDAAYRRAQTARGYLTDLIECLDEKMPELEALESRALALQRRRHDFLVERRRADVRDQAQDVLALAARPGASRPPDGPEKTRRTAEREGRRRARRLRREAAPAARAHRDGDSSDDDLPPDEHHHAQAERESIRVAARALFADALEAWRALRGVCGALASWRSRDRAAYCDAHLPAALPKLLAPYVRHQLILWNPLADEDNEDYEKMDWYNCLMMYGVGTPEGGDAEAAEDAGAETPLTESAVRDDPDLMLVPTILNKVVLPKITELVEQAWDPMCVRACVRLRHVLVRAAEAPGAAHALKRLANAAAQRIAQALNADVFLPALPPAVMEGPGGAFWRRCVGAGVRLLRGMLALTAPPALLNNDDNVLALIETLSCASGAAPGPSMAGACAALCDTLPRAGRLRRRALLRLARLAALALARLQTDNPLHMKAIEQARAVIAESKAME
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00662239;
- 90% Identity
- -
- 80% Identity
- -