Ealt018088.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Epirrhoe alternata
Gene Symbol
sip1
Assembly
GCA_963565295.1
Location
OY751395.1:3716169-3725700[-]

Transcription Factor Domain

TF Family
GCFC
Domain
GCFC domain
PFAM
PF07842
TF Group
Unclassified Structure
Description
This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 5e-54 6.8e-50 170.8 3.4 4 230 370 578 367 597 0.94
2 2 2 2.7e+04 -6.0 27.6 159 275 1291 1401 601 1401 0.92

Sequence Information

Coding Sequence
ATGTCTGACGATGAGGTTATTCGCTTCGAAATCACAGACCATGATTTGGATAATGAATTTAACTTCAATAGACCCCGAGGGAAAAATAAGAAGGAACACCAAATATACGGTATGTGGGCTAAAGACAGCGATGAAGAAGACAATGAGGATAACGTGCGCCAACGGACCAGAAAACCTAAGGACTATTCAGCGCCTATAGGCTTTGTTATGGGAGGTGTGCAACAGGCAGGCAAGAAAAAAGAAGAGAAAAAAGAATTAGAATCAACGGAAGCCTCCACATCCCGGCCTAAGTTTGCACCAGACAGCTCCGATGATGAACAGCCGAGTACACCTTTAGAGAGTGAGACAGCTGGCATCCGGAGAAAGGGACAAGGCATGAGGCAGGCCAGCCTGGGCGGCAATGTCGGCAACTGGGAGAAACATACTAAGGGTATTGGTGCCAAATTGTTGTTACAGatggGCTACAAACCAGGCATGGGTCTGGGTAAAGACCTTCAAGGTATATCAGCGCCGGTGGAGGCCACTGTGAGGAAAGGGAGGGGTGCGATAGGAGCTTATGGACCTGAGAAAGCTGCTcaAAAAGCGAAAAAAGAAGAGGAAAAACGCCTGAAAGAGAAAGAAGAGCAAGAGAAAGAGACAACAGAGAAGTCGTACAACTGGAAGAAGTCTCACAAAGGGCGCTACTTCTACAGAGACTCGGAAGATGTTATACAAGAGGGTAAACCCACGATGCATACTATGACCAGTAGTTCGTTGGCTCGTGTACCAGTGATAGATATGACTGGCCGTGAGAAGCGCGTGCTAAGTGGCTACCACGCGCTACGTGCCGCCGCGCCACGATTCGAACATGAGCCTCGGAGGAAATGTGAGCACTTTGCGGCTCCTGAGCTCGCTCATAACCTCGCTCTAATGGTGGACTGCTGTGAACAGGACATTATCCAAAACGCCCGAGACCTAAACACAGCAGAGGATGAAATGATAGTTCTCGAGCGAGACTTGAAAGAATGCGAAATCAATATTGAAGAACAAGATGAGATCATCGCTAAAGTGCAGGCAATATTACAGCGGGTGCAAGCGCTTAATCGTCCGGATCTATCGCTTGAAGCGGCTTACGAAGTTTTAGCTGATTTGAAGGAATCATACCCAATGGAGTACGAAATGTTCGGCCTTGGCTCAATAGCTGGCAACATTGTCAGTCCTTTATTAAGTGCGCTCCTAGCGCCGTGGCAGCCATTGGAAACTCCTGACGAGCCAATACCCACGTTTAGAAAATGGCGGCCGTTGTTAACAGACGAGGCGTATACGAGTTTGCTTTGGCAGCATTTTATGCCGCATCTTACTACTGCTTCAGAATTATGGAACCCCCGGGTCCCAGAACCAATGCTTCGCGCAGTAACCGCATGGAGCGAGGTCTGTCCTCCATGGGTGGCCAGCGAAGTACTAACCCGATGCGTAGTGCCTCGAGTGCTGGCAGCCGTGCGGACCTGGGACCCCACGCACGACACTCAGCCCGTGCACTGCTGGGTGCTGCCTTGGCACGAGCTGGCAGGCACAGCACTAGCCACCAGCGTGTACCCTCTAATCCGGTCGCGGTTATGCAGCGCTTTAGCAGCGTGGCATCCAAGCGACGCGTCCGCTTTGGGCGTCTTAGGCGCCTGGAAGGACGCCTGGCCGGGGGCACTACCGGCGCTACTGCACCACCACGTGTCACCCAAGCTGGAGCACGCGCTCCATCTGCAGCACATCCACCTGCTGCCCGCAGACACCGGTATGTACCCGCAGACACGTGCACTACCGGCGCTACTGCACCACCACGTGTCACCCAAGCTGGAGCACGCGCTCCATCTGCAGCACATCCACCTGCTGCCCGCAGACACCGGTATGTACCCGCAGACACGTGCACTACCGGCGCTACTGCACCACCACGTGTCACCCAAGCTGGAGCACGCGCTCCATCTGCAGCACATCCACCTGCTGCCCGCAGACACCGGTATGTACCCGCAGACACGTGCACTACCGGCGCTACTGCACCACCACGTGTCACCCAAGCTGGAGCACGCGCTCCATCTGCAGCACATCCACCTGCTGCCCGCAGACACCGGTATGTACCCGCAGACACGTGCACTACCGGCGCTACTGCACCACCACGTGTCACCCAAGCTGGAGCACGCGCTCCATCTGCAGCACATCCACCTGCTGCCCGCAGACACCGGTATGTACCCGCAGACACGTGCACTACCGGCGCTACTGCACCACCACGTGTCACCCAAGCTGGAGCACGCGCTCCATCTGCAGCACATCCACCTGCTGCCCGCAGACACCGGTATGTACCCGCAGACACGTGCACTACCGGCGCTACTGCACCACCACGTGTCACCCAAGCTGGAGCACGCGCTCCATCTGCAGCACATCCACCTGCTGCCCGCAGACACCGGTATGTACCCGCAGACACGTGCACTACCGGCGCTACTGCACCACCACGTGTCACCCAAGCTGGAGCACGCGCTCCATCTGCAGCACATCCACCTGCTGCCCGCAGACACCGGTATGTACCCGCAGACACGTGCACTACCGGCGCTACTGCACCACCACGTGTCACCCAAGCTGGAGCACGCGCTCCATCTGCAGCACATCCACCTGCTGCCCGCAGACACCGGTATGTACCCGCAGACACGTGCACTACCGGCGCTACTGCACCACCACGTGTCACCCAAGCTGGAGCACGCGCTCCATCTGCAGCACATCCACCTGCTGCCCGCAGACACCGGTATGTACCCGCAGACACGTGCACTACCGGCGCTACTGCACCACCACGTGTCACCCAAGCTGGAGCACGCGCTCCATCTGCAGCACATCCACCTGCTGCCCGCAGACACCGGTATGTACCCGCAGACACGTGCACTACCGGCGCTACTGCACCACCACGTGTCACCCAAGCTGGAGCACGCGCTCCATCTGCAGCACATCCACCTGCTGCCCGCAGACACCGGTATGTACCCGCAGACACGTGCACTACCGGCGCTACTGCACCACCACGTGTCACCCAAGCTGGAGCACGCGCTCCATCTGCAGCACATCCACCTGCTGCCCGCAGACACCGGTATGTACCCGCAGACACGTGCACTACCGGCGCTACTGCACCACCACGTGTCACCCAAGCTGGAGCACGCGCTCCATCTGCAGCACATCCACCTGCTGCCCGCAGACACCGGTATGTACCCGCAGACACGTGCACTACCGGCGCTACTGCACCACCACGTGTCACCCAAGCTGGAGCACGCGCTCCATCTGCAGCACATCCACCTGCTGCCCGCAGACACCGGTATGTACCCGCAGACACGTGCACTACCGGCGCTACTGCACCACCACGTGTCACCCAAGCTGGAGCACGCGCTCCATCTGCAGCACATCCACCTGCTGCCCGCAGACACCGGTATGTACCCGCAGACACGTGCACTACCGGCGCTACTGCACCACCACGTGTCACCCAAGCTGGAGCACGCGCTCCATCTGCAGCACATCCACCTGCTGCCCGCAGACACCGGTATGTACCCGCAGACACGTGCACTACCGGCGCTACTGCACCACCACGTGTCACCCAAGCTGGAGCACGCGCTCCATCTGCAGCACATCCACCTGCTGCCCGCAGACACCGGTATGTACCCGCAGACACGTGCACTACCGGCGCTACTGCACCACCACGTGTCACCCAAGCTGGAGCACGCGCTCCATCTGCAGCACATCCACCTGCTGCCCGCAGACACCGGTATGTACCCGCAGACACGTGCACTACCGGCGCTACTGCACCACCACGTGTCACCCAAGCTGGAGCACGCGCTCCATCTGCAGCACATCCACCTGCTGCCCGCAGACACCGGTATGTACCCGCAGACACGTGCACTACCGGCGCTACTGCACCACCACGTGTCACCCAAGCTGGAGCACGCGCTCCATCTGCAGCACATCCACCTGCTGCCCGCAGACACCGGTATGTACCCGCAGACACGTGCACTACCGGCGCTACTGCACCACCACGTGTCACCCAAGCTGGAGCACGCGCTCCATCTGCAGCACATCCACCTGCTGCCCGCAGACACCGCCCCCGCTTGGCAATGGTGTATTGAATGGATAGACTTACTCGGAGCGCCCACTGTAGCGGCTATAGCCAGCCGTGCGTTGTTACCTCGCTGGCTCGCTGCATTGGCCGCCTGGCTTAACACCAATCCTCCACACGCTACAGTGCTTAACTCTTACACAGATTTTAAGAAAACCTTCCCCGAAGAGATTCTCAAAGAGCCGGTGGTTCGTGACGCATTCCGGAAAGCACTCGACATGATGAATCGAAGCACAGACATCGACACCGTCGAAGCCCCTCCCCCGCCCCGTTTCACTCCCCTCGACCCTAAGGAAACTTCCAGAATTGTTGACGCACTTTCCTCAACCTCACAGCAGAAATCCTTCTCAGAACTACTCGAATCCCGTTGCATGGAAAAAGGTATCACTTTTGTACCAATCGTCGGCAAGAACAGAGAGGGCAGGCCTATTTATAAGATCGGGGATAAACAGTGCTATGTTATAAGGAATGTTATCATGTATTCGGAGGATTCTGGAAGGAATTTCGCGCCGATTGCGATGGACAGATTGCTGAATATGGTTGAGGATTAG
Protein Sequence
MSDDEVIRFEITDHDLDNEFNFNRPRGKNKKEHQIYGMWAKDSDEEDNEDNVRQRTRKPKDYSAPIGFVMGGVQQAGKKKEEKKELESTEASTSRPKFAPDSSDDEQPSTPLESETAGIRRKGQGMRQASLGGNVGNWEKHTKGIGAKLLLQMGYKPGMGLGKDLQGISAPVEATVRKGRGAIGAYGPEKAAQKAKKEEEKRLKEKEEQEKETTEKSYNWKKSHKGRYFYRDSEDVIQEGKPTMHTMTSSSLARVPVIDMTGREKRVLSGYHALRAAAPRFEHEPRRKCEHFAAPELAHNLALMVDCCEQDIIQNARDLNTAEDEMIVLERDLKECEINIEEQDEIIAKVQAILQRVQALNRPDLSLEAAYEVLADLKESYPMEYEMFGLGSIAGNIVSPLLSALLAPWQPLETPDEPIPTFRKWRPLLTDEAYTSLLWQHFMPHLTTASELWNPRVPEPMLRAVTAWSEVCPPWVASEVLTRCVVPRVLAAVRTWDPTHDTQPVHCWVLPWHELAGTALATSVYPLIRSRLCSALAAWHPSDASALGVLGAWKDAWPGALPALLHHHVSPKLEHALHLQHIHLLPADTGMYPQTRALPALLHHHVSPKLEHALHLQHIHLLPADTGMYPQTRALPALLHHHVSPKLEHALHLQHIHLLPADTGMYPQTRALPALLHHHVSPKLEHALHLQHIHLLPADTGMYPQTRALPALLHHHVSPKLEHALHLQHIHLLPADTGMYPQTRALPALLHHHVSPKLEHALHLQHIHLLPADTGMYPQTRALPALLHHHVSPKLEHALHLQHIHLLPADTGMYPQTRALPALLHHHVSPKLEHALHLQHIHLLPADTGMYPQTRALPALLHHHVSPKLEHALHLQHIHLLPADTGMYPQTRALPALLHHHVSPKLEHALHLQHIHLLPADTGMYPQTRALPALLHHHVSPKLEHALHLQHIHLLPADTGMYPQTRALPALLHHHVSPKLEHALHLQHIHLLPADTGMYPQTRALPALLHHHVSPKLEHALHLQHIHLLPADTGMYPQTRALPALLHHHVSPKLEHALHLQHIHLLPADTGMYPQTRALPALLHHHVSPKLEHALHLQHIHLLPADTGMYPQTRALPALLHHHVSPKLEHALHLQHIHLLPADTGMYPQTRALPALLHHHVSPKLEHALHLQHIHLLPADTGMYPQTRALPALLHHHVSPKLEHALHLQHIHLLPADTGMYPQTRALPALLHHHVSPKLEHALHLQHIHLLPADTGMYPQTRALPALLHHHVSPKLEHALHLQHIHLLPADTGMYPQTRALPALLHHHVSPKLEHALHLQHIHLLPADTGMYPQTRALPALLHHHVSPKLEHALHLQHIHLLPADTAPAWQWCIEWIDLLGAPTVAAIASRALLPRWLAALAAWLNTNPPHATVLNSYTDFKKTFPEEILKEPVVRDAFRKALDMMNRSTDIDTVEAPPPPRFTPLDPKETSRIVDALSSTSQQKSFSELLESRCMEKGITFVPIVGKNREGRPIYKIGDKQCYVIRNVIMYSEDSGRNFAPIAMDRLLNMVED

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-