Ealt013759.1
Basic Information
- Insect
- Epirrhoe alternata
- Gene Symbol
- -
- Assembly
- GCA_963565295.1
- Location
- OY751389.1:11997610-12002001[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 1.5e-11 1.3e-08 35.0 0.0 4 39 142 178 139 182 0.89 2 4 3e-12 2.5e-09 37.3 0.4 2 39 194 231 193 234 0.93 3 4 1.8e-15 1.6e-12 47.5 0.2 2 45 249 293 248 293 0.96 4 4 7.7e-19 6.6e-16 58.3 0.0 1 44 300 344 300 345 0.96
Sequence Information
- Coding Sequence
- ATGCCGGGCTCCGGGTCGGCTACAGTTAAATGCGAACCTCCCTCTGATGAAGATGACGACAGACCTCAGTTGCCAGAGCTCTTCCTAAACAACACGAGCTCCGATGGGCTGGAGGAGCTGGCCCCACCAGCGCCAGCCGCGCCCTCCGCCACGCCCGTCTGCGTGAAGCAGGAACCCGGGGACTCCGCGACACACCTAGAGATCCTGGAGTCAAATCCTCATTGCACGGGTTCTCTATTGGAGAGGCGCATGGCGTTATTGAGGTCAACTGAAGTCCCTGATTCTGCCAGTTTCACGCCGCTGCAACCAATTAAGGATGAACCGTCTTCTGAAGGAGAACATCAGCACCTGAGCAGTGACGAGTTGAGCGACTGCGGGCCGACGGAGCCACTGCGAGGGAGCCCCAAGAGCTGGACGCAGCAGGATATGGAGAACGCGCTGGATGCGCTCAGGAACCATAACATGAGCTTGACTAAGGCATCATCCACATACGGCATCCCATCCACGACACTATGGCAGCGCGCCCACCGGCTTGGCATAGACACGCCGAAGAAGGAAGGCGCCGCCAAGTCCTGGAGTGAGGCCGACCTGCGAGCTGCCCTGCATGCGCTCAGAGCCGGAGCCATCTCCGCTAACAAGGCCAGCAAGGCGTATGGCATCCCCAGCAGCACATTGTACAAGATTGCGCGTCGCGAGGGCATCCGTCTAGCTGCACCGTTCAATGCGGCTCCCGTAGCGTGGCGGCGCGGGGACTTGGCGCGCGCCCTCGCCGCCATCCGCGCCGGCCGCGCCAGCGTGCAGAGAGCCGCACACCAGTACGGGATCCCCACAGGCACTCTATATGGTCGTTGCAAGCGAGAAGGCATTGAGTTGTCACGCTCCAACCCCACGCCGTGGTCTGAAGATGCCATGGGAGAAGCACTGGAAGCTGTCAGAGTTGGCCAAATGTCGATAAATCAAGCAGCAATTCACTACAACTTGCCATATTCATCACTTTACGGAAGATTTAAGCGTTGCAAGTATCAAACTCAGCCCATACCACAACAGGAACTGCAAACTCCAGAAATGGTCCATCAAGAAACCAACTACTACCACCAAGCGCCCTTCTACCCTGAACAGGAGCAATCTCAACACCCGTACCATCAGGAGTTTGTGCAGGATTCCCACAACATTGACCCTTATGGGCAAGTGTATTACAACCAGAACTTTGGCAGTATTGTCACCAGCTGA
- Protein Sequence
- MPGSGSATVKCEPPSDEDDDRPQLPELFLNNTSSDGLEELAPPAPAAPSATPVCVKQEPGDSATHLEILESNPHCTGSLLERRMALLRSTEVPDSASFTPLQPIKDEPSSEGEHQHLSSDELSDCGPTEPLRGSPKSWTQQDMENALDALRNHNMSLTKASSTYGIPSTTLWQRAHRLGIDTPKKEGAAKSWSEADLRAALHALRAGAISANKASKAYGIPSSTLYKIARREGIRLAAPFNAAPVAWRRGDLARALAAIRAGRASVQRAAHQYGIPTGTLYGRCKREGIELSRSNPTPWSEDAMGEALEAVRVGQMSINQAAIHYNLPYSSLYGRFKRCKYQTQPIPQQELQTPEMVHQETNYYHQAPFYPEQEQSQHPYHQEFVQDSHNIDPYGQVYYNQNFGSIVTS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01528203;
- 90% Identity
- -
- 80% Identity
- -