Eram014587.1
Basic Information
- Insect
- Epinotia ramella
- Gene Symbol
- GATA-B
- Assembly
- GCA_947578815.1
- Location
- OX388200.1:28904065-28931144[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 4.4e-18 2.2e-14 53.7 3.0 1 34 302 334 302 336 0.97 2 3 2.2e-18 1.1e-14 54.6 6.1 1 34 371 403 371 405 0.97 3 3 1.7 8.5e+03 -2.6 0.0 13 22 517 526 515 526 0.83
Sequence Information
- Coding Sequence
- ATGTTGCACGACGCGTGGCCTGGCCCCGCGACCGCCATCACTGGCCCTTGGCTGAAAACAGAAATACTCGAACTGGACGCCCTCATTGCCGAAGTTAACAACAACTGCCTTAAAGAAGGCGAGGCGGAGTGCGGCGCGGAGGGCGCGGGCGGCGAGGCAGAGAGCCCGCCCCCCCTGCCGGCGTTCGGCTACGCCCACCAGGGCGGGCTGTCGCCGTCCCACTCGCGCAGCTACCAGGAGCTGCGGCCGGCGGCACACGCGCGCGACATGCAGACCTACCCGCACCTCGAGGAGACGCTGTTCAAGCCGGCGGGCGCGGCTTCCACCGACGGCGGCAGCGTGCTCATCTTCCGCCGCAGCCCCGAGCTGAGCCCGTCCCCCGAGCGCCGCGACGACTACCGCTCTATCCACCCCTACGAGGCCTACACGCCGGGCCCGCCGCCCGCCTACGCGCACGACCACCATCACCATGTCGACGGGGGCGGCAGCGGCGGCGTGTATCCTCGCTGCACTTACCCCGGCGGGGCACCCTACTTCGGGAACGGCGCAGAGCTAACCTCGCAACCACAGATCTGGAACTCCAGTGCAGGCGGCTCCCCGAGCTACGGCGGTTCGAGCGGCAGCGCGCCGGGCGCGGTCCTGGAAGACTACGCTGAGGGCGGCGCGGGCGGCGCCGGCGGCTCGCCCGGCGCCGGCGGAGCGTTGCCCTCCTTCAACACCCGCTTCGGGACGTCCTTCGTTTGTGCCACCTCACGCCCTTCCACAGTTTATGGGACCACTGGTCTACCATCCAACGCCTACGTACACCAGGAAGTGTGGTTAGAAGGCAGTCGACGACAGTACTCCGCCGCCGCCAATCTATCAGCAATCGAGATGGCGGAGATTTTCACGGAGGGGCGCGAGTGCGTGAACTGCGGCGCCATCGACACGCCGCTGTGGCGGCGCGACGGCACCGGCCACTACTTGTGCAACGCGTGCGGCCTCTACAACAAGATGAACGGCATGAACCGGCCGCCCAAGCAGCCGCGCCGGCTGGTACGTCAGCGGCACGCGGCGCACGCCATGCCCGCGCCCGCCAACGACATGGGCGCGAAGAGGCCGGGCCTGTCGTGTAGCAACTGCCACACGACGATGACGTCGCTGTGGCGCCGCAACGCGCACGGCGAGACCGTGTGCAACGCCTGCGGCCTCTACTACAAGCTGCACAACATCAACCGCCCTATGGCCATGAAGAAGGACTCCATACAGACGAGAAAGCGGAAGCCAAAAAACAGCCTGAAAGCGGAGCGGAACCTAAAGAATTTAGCCCAACACTCGCACTCCACTGCAGTCAAAATGGAAGCTCTCTTGGACGCGGGTGCAAGCGTGGCATCGAACGTGGGCGAGAGCAATCGGGGGCTGGCGCTGGGCTACTACGTGCAGCAGCAGCTGAAGCGCGAGGAGCCCCCACCGGCGCACGCGCACGGGCACGCGCACGCGCACGCGCACGCGCACACGCCCGCGCTGATGCACCACGTGCACGCGCAGCAGCTCTACGAGGACGAGTTCCGGCGCGCGCCCGACGGCGCCGACCGCCTCGACCGCCCCACCGTCGTCTCCATCGGCAGCTGA
- Protein Sequence
- MLHDAWPGPATAITGPWLKTEILELDALIAEVNNNCLKEGEAECGAEGAGGEAESPPPLPAFGYAHQGGLSPSHSRSYQELRPAAHARDMQTYPHLEETLFKPAGAASTDGGSVLIFRRSPELSPSPERRDDYRSIHPYEAYTPGPPPAYAHDHHHHVDGGGSGGVYPRCTYPGGAPYFGNGAELTSQPQIWNSSAGGSPSYGGSSGSAPGAVLEDYAEGGAGGAGGSPGAGGALPSFNTRFGTSFVCATSRPSTVYGTTGLPSNAYVHQEVWLEGSRRQYSAAANLSAIEMAEIFTEGRECVNCGAIDTPLWRRDGTGHYLCNACGLYNKMNGMNRPPKQPRRLVRQRHAAHAMPAPANDMGAKRPGLSCSNCHTTMTSLWRRNAHGETVCNACGLYYKLHNINRPMAMKKDSIQTRKRKPKNSLKAERNLKNLAQHSHSTAVKMEALLDAGASVASNVGESNRGLALGYYVQQQLKREEPPPAHAHGHAHAHAHAHTPALMHHVHAQQLYEDEFRRAPDGADRLDRPTVVSIGS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00463037; iTF_01136400; iTF_00659134;
- 90% Identity
- iTF_00659134;
- 80% Identity
- -