Edem028352.1
Basic Information
- Insect
- Epinotia demarniana
- Gene Symbol
- GATA-B
- Assembly
- GCA_945869435.1
- Location
- CAMBUM010000535.1:529262-558304[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 5.6e-18 3.2e-14 53.7 3.0 1 34 305 337 305 339 0.97 2 2 2.8e-18 1.6e-14 54.6 6.1 1 34 374 406 374 408 0.97
Sequence Information
- Coding Sequence
- ATGTTGCACGACGCGTGGCCCGGCCCTGCGACCGCCATCACTGGCCCTTGGCTGAAAACAGAAATACTCGAACTGGACGCCCTCATTGCCGAAGTTAACAACAACTGTCTTAAAGAAGGCGAGGCGGAGTGCGGCGCggagggcgcgggcggcggcgaggcAGAGAGCCCGCCCCCCCTGCCGGCGTTCGGCTACGCCCACCAGGGCGGGCTGTCGCCGTCCCACTCGCGCAGCTACCAGGAGCTGCGGCCGGCGGCACACGCGCGCGACATGCAGACCTACCCGCACCTCGAGGAGACGCTGTTCAAGCCGACGGGCGCGGCCTCTACCGACGGCGGCAGCGTGCTCATCTTCCGCCGCAGCCCCGAGCTGAGCCCGTCCCCCGAGCGCCGCGACGACTACCGCTCCATCCACCCCTACGAGGCCTACACGCCGGGCCCGCCGCCCGCCTACGCGCACGACCACCATCACCATGTCGACGGcggcggcggcggcgtgtaCCCTCGCTGCACTTACCCCGGCGGGGCACCCTACTTCGGCAACGGCGCAGAGCTAACCTCGCAACCACAGATCTGGAACTCCAGTGCAGGCGGGTCGCCGAGCTACGGCGGTTCGAGCGGCAGCGCGCCGGGCGCGGTGCTGGAAGACTACGCTgagggcggcgcgggcgcgggcggcgccggcggcTCGCCCGGCGCCGGCGGAGCGCTGCCCTCCTTCAGCACACGCTTTGGGACGTCCTTCGTTTGTGCCACCTCACGTCCTTCCACAGTCTATGGGACCACTGGTCTGCCATCCAACGCTTACGTACACCAGGAAGTGTGGTTAGAAGGCAGTCGACGACAACAGTATTCCGCCGCCGCCAATCTATCAGCAATCGAGATGGCGGAGATTTTCACGGAGGGGCGCGAGTGCGTGAACTGCGGCGCCATCGACACGCCGCTGTGGCGGCGCGACGGCACCGGCCACTACTTGTGCAACGCGTGCGGCCTCTACAACAAGATGAACGGCATGAACCGGCCGCCCAAGCAGCCGCGCCGGCTGGTACGTCAGCGGCACGCGGCGCACGCcatgcccgcgcccgccaacGACATGGGCGCGAAGAGGCCGGGCCTGTCGTGTAGCAACTGCCACACGACGATGACGTCACTCTGGCGCCGCAACGCGCACGGCGAGACCGTGTGCAACGCCTGCGGCCTCTACTACAAGCTGCACAACATCAACCGCCCTATGGCCATGAAGAAGGACTCCATACAGAAGAGAAAGCGGAAGCCAAAGAACAGCTTGAAAGCGGAGCGGAACCTAAAGAGTATAGCCCAGCACACGCACTCCACTGCAGTCAAAATGGAAGCTCTCTTGGATGCAGGTGGCGTGGCATCGAACGTGGGCGAGAGCAATCGGGGGCTGGCGCTGGGCTACTACGTGCAGCAGCAGCTGAAGCGCGAGGAGCCCCCCCCGGCGCACGCGCACgtgcacgcgcacgcgcacgcgcccgCGCTGATGCACCACGTGCACGCGCAGCAGCTCTACGAGGACGAGTTCCGGCGCGCGCCCGACGCCGCCGACCGCCTCGATCGCCCCACCGTCGTGTCCATCGGCAGCTGA
- Protein Sequence
- MLHDAWPGPATAITGPWLKTEILELDALIAEVNNNCLKEGEAECGAEGAGGGEAESPPPLPAFGYAHQGGLSPSHSRSYQELRPAAHARDMQTYPHLEETLFKPTGAASTDGGSVLIFRRSPELSPSPERRDDYRSIHPYEAYTPGPPPAYAHDHHHHVDGGGGGVYPRCTYPGGAPYFGNGAELTSQPQIWNSSAGGSPSYGGSSGSAPGAVLEDYAEGGAGAGGAGGSPGAGGALPSFSTRFGTSFVCATSRPSTVYGTTGLPSNAYVHQEVWLEGSRRQQYSAAANLSAIEMAEIFTEGRECVNCGAIDTPLWRRDGTGHYLCNACGLYNKMNGMNRPPKQPRRLVRQRHAAHAMPAPANDMGAKRPGLSCSNCHTTMTSLWRRNAHGETVCNACGLYYKLHNINRPMAMKKDSIQKRKRKPKNSLKAERNLKSIAQHTHSTAVKMEALLDAGGVASNVGESNRGLALGYYVQQQLKREEPPPAHAHVHAHAHAPALMHHVHAQQLYEDEFRRAPDAADRLDRPTVVSIGS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00660943;
- 90% Identity
- iTF_00660943;
- 80% Identity
- -