Eram024948.1
Basic Information
- Insect
- Epinotia ramella
- Gene Symbol
- dl
- Assembly
- GCA_947578815.1
- Location
- OX388201.1:18753182-18787454[-]
Transcription Factor Domain
- TF Family
- RHD
- Domain
- RHD domain
- PFAM
- PF00554
- TF Group
- Beta-Scaffold Factors
- Description
- Proteins containing the Rel homology domain (RHD) are eukaryotic transcription factors. The RHD is composed of two structural domains. This is the N-terminal DNA-binding domain that is similar to that found in P53. The C-terminal domain has an immunoglobulin-like fold (See PF16179) that functions as a dimerisation domain [1-2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 5.8e-18 5.1e-14 53.5 0.0 1 62 7 71 7 76 0.93 2 2 1.8e-17 1.6e-13 51.9 0.0 65 168 151 269 146 270 0.83
Sequence Information
- Coding Sequence
- ATGTCTTCCCAACCGTACGTCACCATCACAGAGCAGCCAGCGCCCAAGCAGCAGAGGTTTCGGTACTTGAGCGAGGTGGACGGGGCGCGATCCGTGGGTTCGATCCCGGGTGTGAGCAGCACGTCGGACCGCAAGACCTTTCCCTCCATCCGCGTGAACGGGTACAAGGGGCCCTTCCTCGTCGTGCTGTCCCTCCTCAACCCCGACAATAACTTAATTGACAACGCGTCCGTGTTGGAACGAATGGGCCTGCAGGTGCCGCGTGCGTGTGGGCCGGCGGTCGGCGCGGTGGGCGGAGCGGTGGCGGCGCGGCGCCCGCGGCGCCTGTTCGCGGTGGCCGGCGAGCGCACGAGGCGCGGTGCGAACGCTCCCACTGCTAGGGCGCCCCACAGCCCTAATCCATATAATGCAGGAAGCCGACAACATAGACATATTTGCGGACAGTATTTAACTCATCCTCATAGCATCTCGGGATCGTCGGACCCCCGCTACATATGCAGGGACGGGGTCATCTTCGTAATATCGGAGGAGGCCGACGTCGTCTTTAAAAATATAGGCGTTCTATGCGTTAAGGGGAAAACGGAAAAAGACGTCAAATCGGCGTTGAAAATGCGTAAACAACTGGGTATCGATCCTTTCAACGCCGGCTTCCCACATATGAACGACCATAGCCGAATCAACTTCACAGCAGTTCGCCTTTGCTTCCACGTGATTCTGCCTGCACTGGACTGGACTCCCGCTCATCGTGATAATCTAAGCAAATACACTAGGCCTCTGCGTGCGGTCGTATCACAAGTGATATACGATGCGAAGAAACTTAATGAGCTCAAGATCATACATATTAACAGCTGCGCTGGATCGTCGTACGGAGGAAATGAAATGACATTACTATGTGATAAGTACACAGGGCTGAACCCGGACGTGGTGTTTGACAACGAGCGCGGGTGGACGCAGAAGGCATCGGTGAAGATTTACCACAAGCAGCTCGCCATCGTGTTCGAAGCCCCGCCGTACCCAGCCCACCAAGACCGGGACAATCTCAAGGTGAAGGTGTACCTTGAGCAGACGATCGACCGCCGCGTGGAGCGCAGTCCGGCGGCCACCGTCGAGTACCTCCCGAAGGACCCCAAGGGAAGCCCTCCCAAGTTCCCCTCGCCGCCTCAATCAGAGAAGTCAAGCATCTCGCTGAAACAAGTAAGAATACAGCAGCGTCCTTGTCCCGGCGAACCCGAAGGCGGCCGCTTGAAGCGGTGGCGGCCGTGGGGCAGGGGCGGAGCACCCCCAGACCCCTGCACAACGGACTCGGAGGAAGATCACATCTCATCAGATCACTTTTCGCAGATTATTATCAGAGAGCTTAAAAACACTGCACCAGGTCGGACAGATATGGATGAGAGATGTGAAGTCATACCCTTATTTGATCCAAACAATCCGGAATTACAGGCACATGAATGGATCAGTACAATTGATCAACTCGGAGGAGCCTACCCACTAAAACTCCAGCGGCGTCACCCTCACCTGCCGTTAAAGGGGCGTCGTGGGATGCAGCATTACTTACCACGACGCCCCCCGGCGGCCCTGGCTGCTAAGCTAGGGCACCCGCGCGACTAA
- Protein Sequence
- MSSQPYVTITEQPAPKQQRFRYLSEVDGARSVGSIPGVSSTSDRKTFPSIRVNGYKGPFLVVLSLLNPDNNLIDNASVLERMGLQVPRACGPAVGAVGGAVAARRPRRLFAVAGERTRRGANAPTARAPHSPNPYNAGSRQHRHICGQYLTHPHSISGSSDPRYICRDGVIFVISEEADVVFKNIGVLCVKGKTEKDVKSALKMRKQLGIDPFNAGFPHMNDHSRINFTAVRLCFHVILPALDWTPAHRDNLSKYTRPLRAVVSQVIYDAKKLNELKIIHINSCAGSSYGGNEMTLLCDKYTGLNPDVVFDNERGWTQKASVKIYHKQLAIVFEAPPYPAHQDRDNLKVKVYLEQTIDRRVERSPAATVEYLPKDPKGSPPKFPSPPQSEKSSISLKQVRIQQRPCPGEPEGGRLKRWRPWGRGGAPPDPCTTDSEEDHISSDHFSQIIIRELKNTAPGRTDMDERCEVIPLFDPNNPELQAHEWISTIDQLGGAYPLKLQRRHPHLPLKGRRGMQHYLPRRPPAALAAKLGHPRD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -