Enis017498.1
Basic Information
- Insect
- Epinotia nisella
- Gene Symbol
- -
- Assembly
- GCA_932294385.1
- Location
- CAKOAM010000082.1:2817494-2830377[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 14 0.0026 0.18 12.8 1.0 2 23 170 192 169 192 0.91 2 14 2.2 1.5e+02 3.6 0.3 6 23 202 219 200 219 0.94 3 14 0.0034 0.23 12.5 4.3 1 19 253 271 253 276 0.90 4 14 0.2 13 6.9 0.9 5 23 285 303 283 303 0.94 5 14 0.0013 0.088 13.8 0.5 2 23 310 331 309 331 0.96 6 14 2.6e-06 0.00018 22.3 1.0 1 23 339 361 339 361 0.98 7 14 0.0012 0.079 13.9 2.0 1 23 370 393 370 393 0.97 8 14 0.00031 0.021 15.7 0.2 1 23 399 421 399 421 0.97 9 14 1.3e-06 9.2e-05 23.1 2.8 1 23 427 449 427 449 0.97 10 14 0.00032 0.022 15.7 0.6 1 23 454 476 454 476 0.98 11 14 4.2e-06 0.00029 21.6 4.2 1 23 482 504 482 504 0.97 12 14 0.00032 0.022 15.7 2.1 2 23 511 533 510 533 0.95 13 14 0.0011 0.078 13.9 2.2 2 23 558 580 557 580 0.92 14 14 7 4.7e+02 2.0 0.4 8 23 602 618 601 618 0.86
Sequence Information
- Coding Sequence
- ATGGTAAATGAAACTGATGATCTGCCAACGAGGATCTGTCTCAACTGTGAAGAGAAAATGGTGTCTTTTCAGTTGTTTGTTTTGGAATGTTATAAAGTGCAGGAGGATTTTAGGAAACAAATTGACAAGGTGCAGTCAAACAATTGTAGTGATATGCAGATCAAGCTCGAGGTTGCCAACACAGACTATGGAGTATCTATAATTAAATCCGAGGTCAAAGATGAGTTGACGGCTGAGGATATAGTTAGTGCAATTGCTACAAACGATGCTTCACTGTCTGAATTAGAAGCTCTAGATTACAATGACGACATTGGCATGGATGATGATGATGGTGATGTTGATGAAGATGATGATGATGATGATGACTTGGATGACATAGCAATAGCAACATTGAAAGAAATGAAGATAAAACGAATCAAAAAGAAACCCATTTCAGACGAGGACTCTATAAAGTTTTCTGAAATTTTAAAACAACCTAACTTGAAAGTAAAAGATTTAGTAAAGTTAACATGTCATCTTTGTGGAGCAGAATCAAATACATGGAGTAATTTGCGTCTGCATTACTTCAATAACCATAGGAGCAAAGTTGTAGCATACTGTCTGTGTGGATATGCCATAAGGTCCAAAAGTGTTCTGTATAAACATGTTTCTCAGCACAAGTTGGAAAGTAGAAAAATAAGAAGAGCTGCTGACGTGGTTGAAGAAAATCAAGAGGACCCTAAGTATTCACATTTGAAAATCAAAAACTTTGTTAATTTCACTTGCGACACCTGTCAGAAGGTTTGTTCCAGTTGGTACACTCTGAAGGCACACTGTGAAAGAGCTCATGATATTTTACCCGTAGTGCATTGTGTTTGCGGAATTTCACTCAAGTCAAAATCCGTTCTCTACAAGCACATACAAGACCATAAAAACCCAAATGTATTATCCTGTGACAAATGCCCGCGTATAACAAAGACATTAGCAGCATTAAACAAACATAAAATGAGACATGTGCCTAAATCGGAACGGAAATTCACATGCGAATCATGTGATAAAATATTTACTACAAAGGATGCATTAAAATCTCATGAACGGTCCCACATTCCAATTGAAGCTAGGAAAATATATCATTGTGATATGTGTAATATGAAGTTCACAACCCGATCGTCGGCGGCGTCGCATAAGCGCGTGGTTCACGAGAAGATCAAGAGTTACGTGTGCGACCTGTGCGGCTACGCGTGCGGCACCAACGGCGAGCTGCGCCAGCACCGCGCCATCCACAGCGACGACAAGCCCTTCGTGTGCAGGAAGTGCTCCAAGTCATTCAAGACATATTCGAATCTCAAAACGCACATGGACATCCACGAAGAGACGTCGTACCCGTGCTACGTGTGCAACCGCGTGCTCAACAGCCGGCGGACGCTGCGCAAGCACTTGCTAGTGCACGAAGACAAGTGCCGGCACGTCTGTTCATACTGCAACAAGGCCTTCAAGCGGCGGCAGACGTTGAAGGTTCACATGTACACTCACACTGGCGACAAGCCGCTGACGTGTAAATGGTGCGACGAGCGGTTCGCGTACGCGTCCACGCTGCGCTCGCACCGCCTGCGCTGCCACCCCGACAAGATGGCGCAGCAGATGAATGAGCAGTTCGTCTACCGGCACGTCAACATCATGCAGCAGCCGCTGACGTGTAAATGGTGCGACGAGCGGTTCGCGTACGCGTCCACGCTGCGCTCGCACCGCCTGTTCTGCCACCCCGACAAGATGGCGCAGCAGATGAACGAGCAGTTCGTCTACCGGCACGTCAACATCATGCAGCAGCGGTTCGCGTACGCGTCCACGCTGCGCTCGCACCGCCTGTTCTGCCACCCCGACAAGATGGCGCAGCAGATGAATGAGCAGTTCGTCTACCGGCACGTCAACATCATGCAGCAGCGGATCGCGTACGCGTCCACGCTGCGCTCGCACCGCCTGCGCTGCCACCCCGACAAGATGGCGCAGCAGATGAACGAGCAGTTCGTCTACCGGCACGTCAACATCATGCAGCAGCGGATCGCGTACGCGTCCACGCTGCGCTCGCACCGCCTGCGCTGCCACCCCGACAAGATGGCGCAGCAGATGAACGAGCATTTCGTCTACCGGCACGTCAACATCATGCAGCAGGAATACATCAAAGCGGACGTCGCTGCATTGAACGCGAAAAATGAAGTCGAGGCTATATAA
- Protein Sequence
- MVNETDDLPTRICLNCEEKMVSFQLFVLECYKVQEDFRKQIDKVQSNNCSDMQIKLEVANTDYGVSIIKSEVKDELTAEDIVSAIATNDASLSELEALDYNDDIGMDDDDGDVDEDDDDDDDLDDIAIATLKEMKIKRIKKKPISDEDSIKFSEILKQPNLKVKDLVKLTCHLCGAESNTWSNLRLHYFNNHRSKVVAYCLCGYAIRSKSVLYKHVSQHKLESRKIRRAADVVEENQEDPKYSHLKIKNFVNFTCDTCQKVCSSWYTLKAHCERAHDILPVVHCVCGISLKSKSVLYKHIQDHKNPNVLSCDKCPRITKTLAALNKHKMRHVPKSERKFTCESCDKIFTTKDALKSHERSHIPIEARKIYHCDMCNMKFTTRSSAASHKRVVHEKIKSYVCDLCGYACGTNGELRQHRAIHSDDKPFVCRKCSKSFKTYSNLKTHMDIHEETSYPCYVCNRVLNSRRTLRKHLLVHEDKCRHVCSYCNKAFKRRQTLKVHMYTHTGDKPLTCKWCDERFAYASTLRSHRLRCHPDKMAQQMNEQFVYRHVNIMQQPLTCKWCDERFAYASTLRSHRLFCHPDKMAQQMNEQFVYRHVNIMQQRFAYASTLRSHRLFCHPDKMAQQMNEQFVYRHVNIMQQRIAYASTLRSHRLRCHPDKMAQQMNEQFVYRHVNIMQQRIAYASTLRSHRLRCHPDKMAQQMNEHFVYRHVNIMQQEYIKADVAALNAKNEVEAI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00462663;
- 90% Identity
- -
- 80% Identity
- -