Enis010893.2


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Epinotia nisella
Gene Symbol
-
Assembly
GCA_932294385.1
Location
CAKOAM010000046.1:3315430-3332538[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 17 0.0001 0.0068 17.3 0.1 3 23 125 145 124 145 0.97
2 17 9e-07 6.2e-05 23.7 1.2 1 23 151 173 151 173 0.99
3 17 5.6e-06 0.00038 21.2 2.7 1 23 179 201 179 201 0.99
4 17 8.4e-07 5.7e-05 23.8 1.3 1 23 216 238 216 238 0.98
5 17 0.00011 0.0077 17.1 0.7 1 23 253 275 253 275 0.98
6 17 5.2e-05 0.0035 18.2 3.1 1 23 290 312 290 312 0.98
7 17 6.4e-07 4.4e-05 24.2 1.5 1 23 327 349 327 349 0.99
8 17 0.00016 0.011 16.6 2.8 1 23 355 377 355 377 0.98
9 17 9.8e-05 0.0067 17.3 0.0 1 23 384 406 384 406 0.99
10 17 1.1e-05 0.00077 20.3 2.1 1 23 412 434 412 434 0.99
11 17 0.15 10 7.3 1.8 1 23 441 463 441 463 0.98
12 17 6.1e-07 4.1e-05 24.2 2.3 1 23 469 491 469 491 0.99
13 17 0.042 2.9 9.0 1.8 1 23 498 520 498 520 0.98
14 17 2.5e-06 0.00017 22.3 1.5 1 23 526 548 526 548 0.99
15 17 0.002 0.14 13.2 0.3 1 20 554 573 554 576 0.93
16 17 3.9e-05 0.0026 18.6 1.4 2 23 583 604 582 604 0.96
17 17 3.5e-06 0.00024 21.8 1.4 1 23 610 633 610 633 0.97

Sequence Information

Coding Sequence
ATGTTCGAGCAGCAGATCAAGGCTGAACCTATGAGCTTCTACACATCACATGCCCACGTCCACTCCGCGCCCACGATAGTTCGCTCCGACTCAGCACACATCATCAACATGAACCAGCATCACCCGGAAGACTCCAAGGACAGCCTCATCATACAACAACAGGTGCATCAGCAGGATCTGATGGACCATCAACAGCAGGACCTGCAGCAGGATGATGAGTTAAGTTTTAAAGGAATGGATGATGAAGGAGTCGAAATGGATATGGATGGTCGCCAATGCTCTCAGGGTTTGGGCGTCGATATGGGGTCAGTTCAAACAAAAATGGAGGTATCAAATGGAGGCCAATCAACACCACGTTCCAAACCGCAGGCCTGTAAGGTTTGCGGTAAGGTACTCTCGTCCGCTTCGTCTTATTACGTCCATATGAAGCTTCATTCCGGAAACAAGCCTTTTCAGTGCACGGTTTGCGATgcagcattctgccgcaaaccgtacctggaggtccacatgcgcacgcacacgggcgagaggcctttccagtgcgatctctgcctcaaacgcttcacacagaagtcgagtctcaacacgcataagcgcgttcacaccgatgagcacatgcgcgccttgttggtgaaggagcggccctaccgctgcgagctctgtggcgtgcgcttcacgcagagctccagcctcaaccgccacaagaaaatacacacggAGGAACACAGACGCGCGCTGCTGGCTAAGGAACGCCCCTACCAATGCGGCGTCTGCTATCTGAGATTCACGCAGAAATCGAGTTTGGGCCGGCACGGAAAAATACATACCGAGGAGCACAGACGAGCCCTGTTAGAGAAAGTgcggccgtaccagtgccacatctgttttatgcgcttcactcagaagtccagcctgggccgacatgGGAAAATACATACTGAGGAGCACATCCAATCGCTGATCAACAAAGTgcgcccgtatcagtgcgacgtctgtgacaagcggttcacgcagaagtcgagcctgggcactcataaacgtatacacactggggagcggccgttccagtgcaccgtctgcctcaagtccttcacgcagaagtgcgcgctcaatttgcacgaaaaaatacatacggtgcaagggcgcccttactcgtgcgggctttgcccggcggccttcgcccgccgcccctacctggacattcacatgcgcacgcacacaggcgagcggccctatcagtgcgacgcctgtctcaagcgcttcacgcagaagtccagcctcaatatacataagcggacgcacacagTCCAGGGCAgaccgttccagtgcctgtcgtgtccggccgccttcacgtgcaagcagtacctggagatccacaaccgcacgcacacgggcgagcggccgtatcagtgcgacatctgcctcaagcggttcacgcagaaatccagcctcaacatccacaagcggacgcactcagtgcagggccggccgttccagtgcctgcagtgtccggccgccttcacgtgcaagcagtacctggagatccacaaccgcacgcacacgggcgagcggccgtaccagtgtgacgtgtgcctcaagagattcgcgcaaaagtccacactcaacatacacaaacgaacgcacacagGGGAACGGCCATATGCCTGTGACATATGTCAGAAACGATTCGCCGTCAAGAGCTACGTAACAGCACACAGATGGTCGCACGTGGCCGACAAGCCGCTGAACTGCGACCGCTGCTCGATGACGTTCACGTCCAAGTCGCAGTTCGCGCTGCACATCCGCACGCACACGGCCGGCTCCTGCTACGAGTGCAGCGTGTGCGGCCGCACCTTCGTCCGGGACAGCTACCTAATACGACACCACAATCGCGTGCACCGCGAGAACCACAGCAACGTCTCGGCGAACAGCATCGGAACCATAAACAGCGTCGCGACCAACACTAATAATTCGAACAACAGCAATTTTGACTCGCCTGGCGTTTGTGACTTAAGCTTTGTTCCTATGGTGAATCGTTATATGACTTCGCAAGGAACGCAGGTCTCCATGCAAGACACAAGTAAGATGTCTGCAATGTCGCCACAATCTATTGCGTCGATATCTTCGCCGCCTCCGCCGCACACCCCCACTCCGCAGCCCCAAATGTCGGCTCAGATGCATCTGGCCGACTGA
Protein Sequence
MFEQQIKAEPMSFYTSHAHVHSAPTIVRSDSAHIINMNQHHPEDSKDSLIIQQQVHQQDLMDHQQQDLQQDDELSFKGMDDEGVEMDMDGRQCSQGLGVDMGSVQTKMEVSNGGQSTPRSKPQACKVCGKVLSSASSYYVHMKLHSGNKPFQCTVCDAAFCRKPYLEVHMRTHTGERPFQCDLCLKRFTQKSSLNTHKRVHTDEHMRALLVKERPYRCELCGVRFTQSSSLNRHKKIHTEEHRRALLAKERPYQCGVCYLRFTQKSSLGRHGKIHTEEHRRALLEKVRPYQCHICFMRFTQKSSLGRHGKIHTEEHIQSLINKVRPYQCDVCDKRFTQKSSLGTHKRIHTGERPFQCTVCLKSFTQKCALNLHEKIHTVQGRPYSCGLCPAAFARRPYLDIHMRTHTGERPYQCDACLKRFTQKSSLNIHKRTHTVQGRPFQCLSCPAAFTCKQYLEIHNRTHTGERPYQCDICLKRFTQKSSLNIHKRTHSVQGRPFQCLQCPAAFTCKQYLEIHNRTHTGERPYQCDVCLKRFAQKSTLNIHKRTHTGERPYACDICQKRFAVKSYVTAHRWSHVADKPLNCDRCSMTFTSKSQFALHIRTHTAGSCYECSVCGRTFVRDSYLIRHHNRVHRENHSNVSANSIGTINSVATNTNNSNNSNFDSPGVCDLSFVPMVNRYMTSQGTQVSMQDTSKMSAMSPQSIASISSPPPPHTPTPQPQMSAQMHLAD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01246112;
90% Identity
iTF_00022996;
80% Identity
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