Enis007368.3


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Epinotia nisella
Gene Symbol
-
Assembly
GCA_932294385.1
Location
CAKOAM010000026.1:11761788-11784978[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 24 0.0001 0.0071 17.2 1.5 1 23 406 428 406 428 0.96
2 24 0.005 0.34 11.9 0.6 1 20 434 453 434 456 0.94
3 24 3.6e-05 0.0024 18.7 4.6 1 23 475 497 475 497 0.98
4 24 0.00022 0.015 16.2 4.7 1 23 503 525 503 525 0.99
5 24 4.4e-05 0.003 18.4 5.3 1 23 531 553 531 553 0.97
6 24 9.6e-06 0.00066 20.5 7.1 1 23 559 581 559 581 0.97
7 24 8.6e-07 5.9e-05 23.8 2.9 1 23 587 609 587 609 0.97
8 24 0.00012 0.0083 17.0 6.7 1 23 615 637 615 637 0.97
9 24 2.3e-05 0.0016 19.3 6.4 1 23 643 665 643 665 0.98
10 24 0.00063 0.043 14.7 0.5 1 16 671 686 671 688 0.96
11 24 3.3e-06 0.00022 21.9 3.0 2 23 724 745 723 745 0.97
12 24 8.2 5.6e+02 1.8 1.0 1 9 751 759 751 760 0.93
13 24 1.8e-06 0.00012 22.8 2.1 2 23 760 781 759 781 0.97
14 24 5.8e-07 4e-05 24.3 1.9 1 23 787 809 787 809 0.98
15 24 6e-05 0.0041 18.0 7.9 1 23 815 837 815 837 0.98
16 24 3e-05 0.0021 18.9 6.4 1 23 843 865 843 865 0.98
17 24 1.6e-05 0.0011 19.8 5.5 1 23 871 893 871 893 0.98
18 24 9.1e-06 0.00062 20.5 6.0 1 23 899 921 899 921 0.97
19 24 2.6e-05 0.0018 19.1 7.1 1 23 927 949 927 949 0.97
20 24 3.7e-06 0.00025 21.8 6.0 1 23 955 977 955 977 0.98
21 24 0.00016 0.011 16.6 10.0 1 23 983 1005 983 1005 0.97
22 24 1.6e-06 0.00011 22.9 4.0 1 23 1011 1033 1011 1033 0.97
23 24 0.00087 0.06 14.3 0.3 1 23 1040 1062 1040 1062 0.96
24 24 0.036 2.5 9.2 5.1 1 23 1072 1094 1072 1094 0.99

Sequence Information

Coding Sequence
ATGAATTCGGAGCATCACAATATCAACACGGGTGGCGGCCAGCCCCCAGGAAATTCAGAGCAGCAGCAGCAGACGGCGAATCTGACCCCGACGACGTCTGCCACGGACCTGCGAGTCAATTCGGCGGCCGTAAACGTCGCTTTGTCTAGCGTCGCAAAGTACTGGGTGTTTACAAATCTTTTCCCGGGGCCTATACCGCAAGTGTCGGTATATGGGCTGCCCACTGGGACGAGAATAGAAAATGGGAAACCAGTGCAGGACCTTGGTCAAGCCCATGCGAGCATACTCAACGGTGATCCCAACATTATACTTGGACATCCGGGACAGACCCAAGTTACTGTCTCGGCGGCGCAACAGTTACCACAGATTATCGCCACACAGACACAAACACATGATGTCCTAGCTCATGTCCAGCAACAAGAGCTATCCCAGCAGGGCACAGGCAGCTCCGGACAGGTGACGACTAACACGGGTCAAACAACCCATCAGCAGGTAGCCAATAACCGGGTCGAGTTTGTACACCATAACATTGATATGGGTCACCACTCGCAACAACACATAATGCAGCAGCAGCTAATGGCGACGACGCGCCCTGAACACTCCAACCAGCAGATCCAGTTAACAGTGAGTGAAGACGGGATTGTCACCGTGGTAGACCCGGGCGGGGGCAAACTTGTGGATAAAGACGAGCTGCATGAGGCCATCAAGATGCCAGCGGACCACACTCTCACTGTGCACCAGCTGCAACAGATCGTGGGGCAACAGGTGCTAGAAAACGTAGTCCGCATCGAGCAAGCCACCGGCGAGCCGGCGAACATTCTAGTAACGCAGAACCCCGATGGAACCACATCCATAGAGGCCAGCGCCGCGGACCCGCTAGCGGTCGTTAAGGACGAGAAGAGCGGCTCCAAGATAGAGACCGCGCACTTCGCGCTGCCCGCAGAGATCAAGGACCTTAAGAGCATTGATTTAAAGAGTGTGGGAGCGATGGGGATGGAAGGAGCCGTAGTGAAGATATCAGCGGGAGCCTCAGACCACGACATGCACGCCATGTACAAAGTCAACGTGGAAGATCTGTCGCAGCTGCTGGCCTACCACGAAGTCTTCGGCAAACTCAATGCTGACGGCCAGCCCCAAACCAAAGTAATAGGAGAGGTGGAGGTAGAAGCAGGAACGAGCGCCGCCATGTCCGCCGAGGAGAACTCGCCCGGACACCATGCCTGTGATATTTGTGGGAAAATCTTTCAATTTCGATACCAACTCATCGTCCATAGACGGTACCACGGTGAAAGGAAACCTTTTACGTGTCAAGTATGCGGCTCCGCCTTCGCCAATCCCGTGGAACTGTCGAGACACGGGAAATGCCATCTTGCCGGCGACTCGGCGGACAGGACCGCCAAGCGGTTGACGCAGGACAAGCCGTACGCGTGCACGACTTGCCATAAAACGTTCGCGCGCAAGGAGCACCTCGACAACCACGTGCGCAGCCACACCGGGGAGACGCCCTACAGATGTCAATTCTGCGCGAAGACCTTCACTCGGAAAGAGCACATGGTGAACCACGTCCGCAAGCACACGGGCGAGACGCCGCACCGATGCGACATCTGCAAGAAGAGCTTCACAAGGAAGGAGCACTTCATGAATCACGTCATGTGGCATACAGGTGAAACTCCACACCATTGTCAAATATGCGGAAAGAAGTATACTAGGAAGGAGCACTTAGCGAACCATATGAGATCACATACGAATGATACCCCGTTCCGCTGCGAACTCTGTGGGAAGTCTTTCACGAGAAAGGAACACTTCACCAATCACATATTGTGGCATACCGGAGAAACCCCCCACCGCTGCGACTTTTGCTCGAAAACGTTCACGCGCAAAGAGCACCTCCTGAACCACGTGCGACAGCACACGGGCGAGTCGCCGCACAGATGCAACTACTGCTCCAAGTCGTTCACGCGCCGCGAGCACCTCGTCAACCACGTGCGGCAGCACACCGGCGAGACGCCCTTCCAGTGCGGCTACTGTCCCAAGGCCTTCACCCGCAAGGACCACCTAGGTAACATCACATCCATAGTCACGCTGCAACTACTGCTCCAAGTCGTTCACGCGCCGCGAGCACCTCGTCAACCACGTGCGGCAGCACACCGGCGAGACGCCCTTCCATCACGCTGCAACTACTGCCCCAAGTCGTTCACGCGCCGCGAGCACCTCGTCAACCACGTGCGGCAGCACACCGGCGAGACGCCCTTCCAGTGCGGCTACTGTCCCAAGTCACGCTGCAACTACTGCCCCAAGTCGTTCACGCGCCGCGAGCACCTCGTCAACCACGTGCGGCAGCACACCGGCGAGACGCCCTTCCAGTGCGGCTACTGTCCCAAGGCCTTCACCCGCAAGGACCACCTAGTGAATCACGTGCGACAGCACACTGGCGAGTCGCCGCACAAATGCTCGTTCTGCACAAAGTCCTTCACGCGCAAGGAGCACCTCACCAACCACGTGCGGCAGCACACGGGCGAGTCGCCGCACAGGTGCACCTACTGCGCCAAGTCCTTCACTAGGAAGGAGCATCTCAACAACCACGTCAGACAGCATACGGGGGAGACGCCGCACAAGTGCACGTTCTGCCCGAAGGCGTACTCGCGCAAGGAGCACCTCACCAACCACATCCGCCAGCACACGGGCGACGCGCCGCACTCCTGCACCTACTGCAACAAGAGCTTCTCCAGGAAGGAGCATCTCGTCAACCATGTCCGGCAACACACGGGCGAGACGCCGTTCAAGTGCACCTACTGCTCGAAGTCGTTCTCCCGCAAGGAGCACCTCACGAACCACGTGCACCTACACACGGGCGAGACGCCGCACAAGTGTCCCTTCTGCACCAAGACCTTCTCGCGCAAGGAGCACCTGACTAACCACGTCAGGATACACACGGGCGAGTCGCCTCACCGCTGCGAGTTCTGCCACAAAACGTTCACGCGCAAGGAGCACCTCACCAACCACCTCAAGCAGCACACCGGCGACACGCCGCACTCCTGCAAGGTCTGCTCCAAGGCCTTCACTCGCAAGGAGCACCTCGTCGCGCACATGAGATCGCACAGTTGCGGCGAGCGGCCGTTCAGCTGCGGCGAGTGCGGCAAGTCGTTCCCACTGAAAGGTAACCTGCTGTTCCACGAGCGCTCGCACAACAAGAACGCGCAAGGCGCCCGCCCCTTCCGCTGCGAAGTCTGCTCCAAGGACTTCATGTGCAAAGGTCACCTGGCGTCGCACCGGCGCACGCACGCGGCGGGCGCGGGCGCGGGCGCGGGGGCGGAGGACGCGGAGGCGGGCGCGGTGGCGGGCGCGGGCGCGGAGGGCGCGGGGGGCGCGGAGCCCGAGGACTGCGGCGACTGCGTCAAGTGCGAGAAGGACGCGCCCGAGCCCGAGCGGAAACACGCACTCAGACCGGCTGCGGACGCGAGGCTGGTCGAAAGCGCTGTAGCACAAAACCCCCAAGCTAATGCAACTGTGATGCAAATTACCAGCCAAGCGGTGCGCGCGGCCGGCGCGCTGGAGCCCGGCGCCGCCTTCGCGCACCCCGTGTCCGTCAACTACTAG
Protein Sequence
MNSEHHNINTGGGQPPGNSEQQQQTANLTPTTSATDLRVNSAAVNVALSSVAKYWVFTNLFPGPIPQVSVYGLPTGTRIENGKPVQDLGQAHASILNGDPNIILGHPGQTQVTVSAAQQLPQIIATQTQTHDVLAHVQQQELSQQGTGSSGQVTTNTGQTTHQQVANNRVEFVHHNIDMGHHSQQHIMQQQLMATTRPEHSNQQIQLTVSEDGIVTVVDPGGGKLVDKDELHEAIKMPADHTLTVHQLQQIVGQQVLENVVRIEQATGEPANILVTQNPDGTTSIEASAADPLAVVKDEKSGSKIETAHFALPAEIKDLKSIDLKSVGAMGMEGAVVKISAGASDHDMHAMYKVNVEDLSQLLAYHEVFGKLNADGQPQTKVIGEVEVEAGTSAAMSAEENSPGHHACDICGKIFQFRYQLIVHRRYHGERKPFTCQVCGSAFANPVELSRHGKCHLAGDSADRTAKRLTQDKPYACTTCHKTFARKEHLDNHVRSHTGETPYRCQFCAKTFTRKEHMVNHVRKHTGETPHRCDICKKSFTRKEHFMNHVMWHTGETPHHCQICGKKYTRKEHLANHMRSHTNDTPFRCELCGKSFTRKEHFTNHILWHTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHRCNYCSKSFTRREHLVNHVRQHTGETPFQCGYCPKAFTRKDHLGNITSIVTLQLLLQVVHAPRAPRQPRAAAHRRDALPSRCNYCPKSFTRREHLVNHVRQHTGETPFQCGYCPKSRCNYCPKSFTRREHLVNHVRQHTGETPFQCGYCPKAFTRKDHLVNHVRQHTGESPHKCSFCTKSFTRKEHLTNHVRQHTGESPHRCTYCAKSFTRKEHLNNHVRQHTGETPHKCTFCPKAYSRKEHLTNHIRQHTGDAPHSCTYCNKSFSRKEHLVNHVRQHTGETPFKCTYCSKSFSRKEHLTNHVHLHTGETPHKCPFCTKTFSRKEHLTNHVRIHTGESPHRCEFCHKTFTRKEHLTNHLKQHTGDTPHSCKVCSKAFTRKEHLVAHMRSHSCGERPFSCGECGKSFPLKGNLLFHERSHNKNAQGARPFRCEVCSKDFMCKGHLASHRRTHAAGAGAGAGAEDAEAGAVAGAGAEGAGGAEPEDCGDCVKCEKDAPEPERKHALRPAADARLVESAVAQNPQANATVMQITSQAVRAAGALEPGAAFAHPVSVNY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00289860;
90% Identity
iTF_00659613;
80% Identity
iTF_00659613;