Enis015025.1
Basic Information
- Insect
- Epinotia nisella
- Gene Symbol
- -
- Assembly
- GCA_932294385.1
- Location
- CAKOAM010000062.1:3032811-3036211[-]
Transcription Factor Domain
- TF Family
- BTB
- Domain
- zf-C2H2|ZBTB
- PFAM
- PF00651
- TF Group
- Zinc-Coordinating Group
- Description
- The BTB (for BR-C, ttk and bab) [6] or POZ (for Pox virus and Zinc finger) [1] domain is present near the N-terminus of a fraction of zinc finger (Pfam:PF00096) proteins and in proteins that contain the Pfam:PF01344 motif such as Kelch and a family of pox virus proteins. The BTB/POZ domain mediates homomeric dimerisation and in some instances heteromeric dimerisation [1]. The structure of the dimerised PLZF BTB/POZ domain has been solved and consists of a tightly intertwined homodimer. The central scaffolding of the protein is made up of a cluster of alpha-helices flanked by short beta-sheets at both the top and bottom of the molecule [2]. POZ domains from several zinc finger proteins have been shown to mediate transcriptional repression and to interact with components of histone deacetylase co-repressor complexes including N-CoR and SMRT [5, 3, 4]. The POZ or BTB domain is also known as BR-C/Ttk or ZiN.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 8 8.2e-11 2.6e-08 34.5 0.1 4 39 58 92 55 94 0.92 2 8 1.3e-07 4.2e-05 24.1 0.1 13 39 95 120 91 123 0.91 3 8 3.1e-07 9.7e-05 23.0 0.0 13 38 123 147 119 149 0.92 4 8 5.2e-06 0.0017 19.0 0.1 17 38 148 168 147 173 0.88 5 8 4.8e-06 0.0015 19.1 0.1 16 39 168 190 167 192 0.87 6 8 3.1e-07 9.7e-05 23.0 0.0 13 38 193 217 190 221 0.93 7 8 5.6e-06 0.0018 18.9 0.1 17 38 218 238 217 241 0.88 8 8 3.5e-05 0.011 16.4 0.1 17 44 239 265 238 274 0.80
Sequence Information
- Coding Sequence
- ATGGAAGCGGGCATGGAGACGGCGGGGCGCAGCAACCTGCTGGACGATATGCCGCCGTTCAACTACGAGGCGACGTTGCAGGGCGACATGGGTGCCGGTTGCAACGATGTGGGCGACATGACCTTCTGCATGGGCAACTACATCTCCGACTTCATGAAGATGATGTTCACGATGCGCTCTCACCACATGCTCACAGACGTGGTGTTGGAGGTGGGCAGCGAGCTGTTCCACGTGCACAAGGTCGTGCTGGCCGCCGGCAGCCCTTACTTCAAGGTGAGCTACGTGGTGTTGGAGGTGGGCAGCGAGCTGTTCCACGTGCACAAGGTCGTGCTGGCCGCCGGCAGCCCTTACTTCAATGTGAGCTACGTGGTGTTGGAGGTGGGCAGCGACCTGTTCCACGTGCACAAGGTCGTGCTGGCCGCCGGCAGCCCTTACTTCAAGGTGGGCAGCGACCTGTTCCACGTGCACAAGGTCGTGCTGGCCGCCGGCAGCCCTTACTTCAAGGTGGGCAGTGACCTGTTCCACGTGCACAAGGTCGTGCTGGCCGCCGGCAGCCCTTACTTCAATGTGAGCTACGTGGTGTTGGAGGTGGGCAGCGACCTGTTCCACGTGCACAAGGTCGTGCTGGCCGCCGGCAGCCCTTACTTCAAGGTGGGCAGCGACCTGTTCCACGTGCACAAGGTCGTGCTGGCCGCCGGCAGCCCTTACTTCAAGGTGGGCAGCGACCTGTTCCACGTGCACAAGGTCGTGCTGGCCGCCGGCAGCCCTTCCTTCAAGGTGAAGCTGtggagacagaaggtagcccaacacataaactacactagataa
- Protein Sequence
- MEAGMETAGRSNLLDDMPPFNYEATLQGDMGAGCNDVGDMTFCMGNYISDFMKMMFTMRSHHMLTDVVLEVGSELFHVHKVVLAAGSPYFKVSYVVLEVGSELFHVHKVVLAAGSPYFNVSYVVLEVGSDLFHVHKVVLAAGSPYFKVGSDLFHVHKVVLAAGSPYFKVGSDLFHVHKVVLAAGSPYFNVSYVVLEVGSDLFHVHKVVLAAGSPYFKVGSDLFHVHKVVLAAGSPYFKVGSDLFHVHKVVLAAGSPSFKVKLWRQKVAQHINYTR
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -