Basic Information

Insect: Epinotia nisella
Gene Symbol: Hr39
Assembly: GCA_932294385.1
Location: CAKOAM010000016.1:8783011-8813434[-]

Transcription Factor Domain

TF Family: SF-like
Domain: zf-C4|SF-like
PFAM: AnimalTFDB
TF Group: Zinc-Coordinating Group
Description: The ligand binding domain of nuclear receptor steroidogenic factor 1 (SF-1): SF-1, a member of the nuclear hormone receptor superfamily, is an essential regulator of endocrine development and function and is considered a master regulator of reproduction. Most nuclear receptors function as homodimer or heterodimers, however SF-1 binds to its target genes as a monomer, recognizing the variations of the DNA sequence motif, T/CCA AGGTCA. SF-1 functions cooperatively with other transcription factors to modulate gene expression. Phospholipids have been determined as potential ligands of SF-1. Like other members of the nuclear receptor (NR) superfamily of ligand-activated transcription factors, SF-1 has a central well conserved DNA binding domain (DBD), a variable N-terminal domain, a flexible hinge and a C-terminal ligand binding domain (LBD). [1, 8, 3, 11, 6, 5, 12, 10, 9, 2, 4, 7]
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 4 3 2.5e+04 -9.9 14.8 98 187 448 537 217 546 0.70

2 4 5.3e-08 0.00045 20.2 0.1 1 21 621 641 621 649 0.91

3 4 0.029 2.4e+02 1.4 0.0 77 115 666 703 645 715 0.80

4 4 1e-64 8.5e-61 207.0 0.0 201 408 721 938 671 938 0.84

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	4	3	2.5e+04	-9.9	14.8	98	187	448	537	217	546	0.70
2	4	5.3e-08	0.00045	20.2	0.1	1	21	621	641	621	649	0.91
3	4	0.029	2.4e+02	1.4	0.0	77	115	666	703	645	715	0.80
4	4	1e-64	8.5e-61	207.0	0.0	201	408	721	938	671	938	0.84

Sequence Information

Coding Sequence: ATGGCGACGGAGGGGGAAACGGTTAAAGTAGAAGGTGGTCACGTGTCTGTAACTACTATCAGCATGTCGGGGCCCGAGACAAGCAATGGTCAGTTCTCGTACAGCTCGAGCGGGGTCCGGATCAGCGTATCCTCGGACCCCCACGACGAGGACTCGACGGATGCCGAGATATCCAAGATCGACTTCAGTCAGCACCAGTACGAGGTGAACATGCGAAACAAGAAGAAGCGGTCGTCGAGCGGACACGAGCCGGGCGACACGGAGCGGCCCATGTCATGGGAAGGGGAGCTGTCCGATTCTGAAATGGTCATTGACACCAGTGTCAACATGAACGACCCACCCAGCTCCCCCGACCTCCAGTCCTCCCGAGACTCGATCGACACCCTCCGCAACGTTACCATAAAGAGCGAGCCCCTTAAGGAGTTCCCGACCCTGGCCGACCAGCGGGTGCTGGACCTCAAGTACTCGCCCTTACAGCACCAGCGGAGCCTCAGCATGAACCGGCCCCTGAGGTATCAGTTCCCAAGCCTGGCCGACCAGCGCGTGCTGGACCTCAAGCTCAACGTGACCATAGAGAGCGAGTCCCCGAAGCAGATCCCGAGCCTGGCCGACCAGGGCGTGCTGGACCTCAAGTACTCGCCCTTACAGCACCAGCGGAGCCTCAGCATGAACCGGGCTCAACGTGACCATAAAAGCGAGCTCCTGAGGTATCAGTTCCCAAGCCTGGCCGACCAGCGGGTTCTGGACCTCAAGTGCTCGCCCTTACAGCACCAGCGGAGCCTCAGCATGAACCGGCCCCTGAGGGATCAGTTCCCAAGCCCGGCCGACCAGCGGGTGCTGGACCTCAAGTGCTCGCCCTTGCAGCACCAGCGGAGCCTCAGCATGAATCTGGCGAGACAGAGCGAGTCCCGGAAGCAGTTCCCGAGCCTGGCCGACCAGCGGGTGCTGGACCTCAAGTACTCGCCCTTACAGCACCAGCGGAGCCTCAGCATGAATCTGGCGAGACAGAGCGAGTCCCGGAAGCAGTTCCCGAGCCTGGCCGACCAGCGGGTGCTGGACCTCAAGTACTCGCCCTTACAGCACCAGCGGAGCCTCAGCATGAACCGGATATCGGTGCTGACTGAAAACGCGCCGCTGCGCCGGCCGTCGTCGCCAGTTGCTAAGATGGAGCCGAATCCACTACCGCAGCCTCCGGGCGAGATTCAGAACCTCACAATTAAGAAGGAGAGCCGAGAACTGTCTGAGTTGAAGTGCGAACCCTCAGTGGGCATGGAGAAGCTACTGGGCGCCCTCCACGGCTCCCCACTGCTGGGCCGACTGCCAAGGGTCCAATCTAGTGCTAGTACTGATTCGGCCGTCCACTCCATGTATACACACAGTGTGTACAGCAGCCCGTCGGCGAGTCCGCGCGCGTCGCGACACTACACGCCCTCGCTGTCTCGCAACAACAGCGACGCGTCGCACTCCTCCTGTTACTCCTATAGCTCCGAGTTCTCGCCCACACACTCGCCCGTACAGAGCCGGCATCCGCATGTGCTGTACAGAGAACAGACCAATCCCGTGTTCCCGGCGTCGCCTGCCGACGACGAGGAGGCCGAAGACCGGCTGCACCACCACCAGGGCATCAGCAGACAGCAGCTCATTAACAGCCCCTGTCCAATATGCGGCGACAAAATCAGCGGTTTCCACTACGGCATATTCTCCTGTGAATCCTGCAAGGGCTTCTTCAAGCGAACGGTGCAGAATAGGAAGAACTACATGTGTCTCCGCGGCGGGAACTGTCCTGTCACGGTCGCCACACGCAAGAAGTGTCCCGCTTGCAGGTTCGACAAGTGCCTCGGCTGCGGGATGAAGTTGGAAGCCATAAGAGAGGACAGGACGCGAGGCGGTCGCTCGACGTACCAGTGCTCGTACACGCTCTCCGGCGCCGTGTCCACCGGCTCTCTGCTCTCCGCCCCGGTCCCGCCCACTTTACGGCACGCGTCCAGCCTCACTTGCGTGAACGGCCCCGGATCGTACAGTCGAGGCGAGTCGAGTAGCAGCCGTTTAACGCCAGACATACCCCCGTTATTGCAGGAAATAATGGACGTGGAACATCTCTGGCAATACAACGAGTCCGAGCTGAACCGACTTGGCAAGTCCGGCGGTAGCCCGTCGGCCAACCCTTTGCTGGCCGCCTCGGGCATCACCGCTCACAACTCTAGCCCGGACTTTCTCGCCGATCTGTGCAACATCGCCGACCACCGCCTCTACAAGATCGTCAAGTGGTGCAAGAGCTTGCCTCTCTTCAAGAATATTTCGATCGACGACCAGATCTGCCTGCTGATAAACAGCTGGTGCGAGCTGCTGGTGCTCTCCTGCTGCTACCGCGGCGTGGCCACGGTGGGGGAGGTGCGGGTGGGAGGGGGCAGGGGGATCACGCTGCAGCAGAGCGCCAAACTGGGGCTGACTCCGTGCATAGAGCGCATGCTGAGCTTCACGGACCACCTGCGGCGGCTCAGGGTCGACCGGTACGAGTACGTCGCGCTCAAGGTCATCGTGCTGCTCACTTCGGACGCCCCGGAGCTCCGTGAAGCGGAGAAAGTCCGCGCCTCCCAGGAGAAGGCCCTCGCGGCCCTGCAGGCCTACACGGCGGCGCATTCGCCGGACACGCCGGCCAAGTTCGGCGAGCTACTGCTGCGCATACCCGAGCTGCAGCGGACTTGTCAGTTCTTCATGCAAGTCGGCAAGGAGATGCTGAACCCAGCGAACAAGAACAAAGATGGCGACGGCCCCAGCTTCAACCTGCTCATGGAACTGCTAAGGGGCGACCACTGA
Protein Sequence: MATEGETVKVEGGHVSVTTISMSGPETSNGQFSYSSSGVRISVSSDPHDEDSTDAEISKIDFSQHQYEVNMRNKKKRSSSGHEPGDTERPMSWEGELSDSEMVIDTSVNMNDPPSSPDLQSSRDSIDTLRNVTIKSEPLKEFPTLADQRVLDLKYSPLQHQRSLSMNRPLRYQFPSLADQRVLDLKLNVTIESESPKQIPSLADQGVLDLKYSPLQHQRSLSMNRAQRDHKSELLRYQFPSLADQRVLDLKCSPLQHQRSLSMNRPLRDQFPSPADQRVLDLKCSPLQHQRSLSMNLARQSESRKQFPSLADQRVLDLKYSPLQHQRSLSMNLARQSESRKQFPSLADQRVLDLKYSPLQHQRSLSMNRISVLTENAPLRRPSSPVAKMEPNPLPQPPGEIQNLTIKKESRELSELKCEPSVGMEKLLGALHGSPLLGRLPRVQSSASTDSAVHSMYTHSVYSSPSASPRASRHYTPSLSRNNSDASHSSCYSYSSEFSPTHSPVQSRHPHVLYREQTNPVFPASPADDEEAEDRLHHHQGISRQQLINSPCPICGDKISGFHYGIFSCESCKGFFKRTVQNRKNYMCLRGGNCPVTVATRKKCPACRFDKCLGCGMKLEAIREDRTRGGRSTYQCSYTLSGAVSTGSLLSAPVPPTLRHASSLTCVNGPGSYSRGESSSSRLTPDIPPLLQEIMDVEHLWQYNESELNRLGKSGGSPSANPLLAASGITAHNSSPDFLADLCNIADHRLYKIVKWCKSLPLFKNISIDDQICLLINSWCELLVLSCCYRGVATVGEVRVGGGRGITLQQSAKLGLTPCIERMLSFTDHLRRLRVDRYEYVALKVIVLLTSDAPELREAEKVRASQEKALAALQAYTAAHSPDTPAKFGELLLRIPELQRTCQFFMQVGKEMLNPANKNKDGDGPSFNLLMELLRGDH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00658458;
90% Identity: iTF_00659523;
80% Identity: iTF_00659523;