Basic Information

Insect: Epinotia nisella
Gene Symbol: LRRFIP2
Assembly: GCA_932294385.1
Location: CAKOAM010000017.1:10082875-10111075[+]

Transcription Factor Domain

TF Family: LRRFIP
Domain: LRRFIP domain
PFAM: PF09738
TF Group: Unclassified Structure
Description: LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 1.2e-75 3.1e-71 240.6 23.3 1 266 123 382 123 408 0.90

2 10 1 2.5e+04 -35.0 56.4 1 292 409 697 409 701 0.62

3 10 1 2.5e+04 -34.7 56.3 1 292 715 1003 707 1011 0.63

4 10 1 2.5e+04 -34.1 55.6 1 292 919 1207 919 1213 0.62

5 10 1 2.5e+04 -34.9 56.3 1 292 1174 1462 1173 1465 0.62

6 10 1 2.5e+04 -34.7 56.1 1 292 1378 1666 1378 1668 0.62

7 10 1 2.5e+04 -34.3 55.5 1 292 1633 1921 1633 1922 0.62

8 10 1 2.5e+04 -34.2 55.8 1 292 1837 2125 1837 2138 0.62

9 10 1 2.5e+04 -35.7 56.8 1 292 1939 2227 1939 2228 0.62

10 10 1 2.5e+04 -19.1 34.3 1 167 2143 2307 2142 2315 0.71

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	1.2e-75	3.1e-71	240.6	23.3	1	266	123	382	123	408	0.90
2	10	1	2.5e+04	-35.0	56.4	1	292	409	697	409	701	0.62
3	10	1	2.5e+04	-34.7	56.3	1	292	715	1003	707	1011	0.63
4	10	1	2.5e+04	-34.1	55.6	1	292	919	1207	919	1213	0.62
5	10	1	2.5e+04	-34.9	56.3	1	292	1174	1462	1173	1465	0.62
6	10	1	2.5e+04	-34.7	56.1	1	292	1378	1666	1378	1668	0.62
7	10	1	2.5e+04	-34.3	55.5	1	292	1633	1921	1633	1922	0.62
8	10	1	2.5e+04	-34.2	55.8	1	292	1837	2125	1837	2138	0.62
9	10	1	2.5e+04	-35.7	56.8	1	292	1939	2227	1939	2228	0.62
10	10	1	2.5e+04	-19.1	34.3	1	167	2143	2307	2142	2315	0.71

Sequence Information

Coding Sequence: ATGACGCAAATCATGGGCCTTCAGTCCAAAAGCGCAACGCCTGACAATAGCGACGAGGAGAGCGGTGAAGCGTTCACCGACGGAGACTTCGGTGACTCCGATGACGAAATAAACATAGACGTAGACATAGTAGATCGTAGCGATGATTCCAAAACGTCCCCGGTCCCTGTCGAAACGGTTAACACGGAGCTCGCAGGCATGGAGGTCGCGCACGGCGCCCGCAATGGTTTCGAACACGATCATGCTAAAGTTAACGGATTCAAGAGCGACGACGCGGAATGTGTCGCGATGCCTGAGATCCGGCGCGACTCGCACGGCGACCAGAACCCCTCCATCGTTGGCATTCTCGGCGGACAACAGGATCATGCGGAGCAACGGCTAGCGGCGCGTCGCGCGGCGCGGGCGGAGGCGCGCGAGATACGCATGCGCGAGCTCGAGCGGCAGCAGCGCGAGCAGGAGGACCATGCTGACAAGGCCTACGACATGTACGCCGAGACGGTGGGGCGGCGCGCGGGCACCCGGCTGACGGCGCTGAGCCCCGCGGTGCACCACACGCCGCGCCGCGCCTCCGAGGACTCCGCCGATGACTCCTTCAATGTCAAGGATCTCAGGGGGGAGTTAAAAGAAGTAGAGGAGAAGTTCCGAAAGGCCATGATCCTGAATGCACAGCTAGACAACGACAAAGCGGCGCTTGGTTATCAGATCGAGCTACTGAAGGACCGTATTGAGGAGCTACAGGAAGACTACGCGCAGTTACAGCGCGAGCACAAAGAGAAATGCTCCGCCCACGAGCGTCTAAAACGCGAGCACGCGTCTCTCGAACGGGAGCTAGGCGCCGCGCGGGACGCGGTCCGCGCGCGGGACGCGGCCGCCGCGGACGCGGGCTTCGCGTTCGTGGACGCGGCGCCCGCGGCCAACGGCGACGAGGGACAGGCGCACACCTTCCCGCCGCTGGCGCTCGTGTCGCACCAGAATGAGAAGCTGCTGAATGACGCGGGAGAGGGCACGCTAGACGTCCGGTTGCAAAAGCTGCTAAGCGCGAAGCAGTCTCTAGAGGGCGAGGTGCGGCGCCTCAAACTACAGTTGAACGAGGAGCGACACAACGGCGTCGCGCGCGCGCACGACCAGGACCTCGAGTCGGAACTGGAGGCCCTCCGCAAATCGAACGCGGAAGCGAAAGCGCGCGCGGCGCGGGCGGAAGCCGAGGCGGCGCTGCAGGCCGCCGCCGGCGCGCGGCTGGCGGCGCAGCTGCAGCGGCTCAAGGCGCAGGCCGACGCCAGGGACGACGCGGAGGAGCAGCTCAAGCAGGAGCGGAGGAAACTGCAGAGAGAGGTCAGTCACTACTCAGTGGAGGCCGAGGCGGCGCTGCAGGCCGCCGCCGGCGCGCGGCTGGCGGCGCAGCTGCAGCGGCTCAAGGCGCAGGCCGACGCCAGGGACGACGCGGAGGAGCAGCTCAAGCAGGAGCGGAGGAAACTGCAGAGAGAGGTCAGTCACTACTCAGTGGAGGCCGAGGCGGCGCTGCAGGCCGCCGCCGGCGCGCGGCTGGCGGCGCAGCTGCAGCGGCTCAAGGCGCAGGCCGACGCCAGGGACGACGCGGAGGAGCAGCTCAAGCAGGAGCGGAGGAAACTGCAGAGAGAGGTCAGTCACTACTCAGTGGAGGCCGAGGCGGCGCTGCAGGCCGCCGCCGGCGCGCGGCTGGCGGCGCAGCTGCAGCGGCTCAAGGCGCAGGCCGACGCCAGGGACGACGCGGAGGAGCAGCTCAAGCAGGAGCGGAGGAAACTGCAGAGAGAGGTCAGTCACTACTCAGTGGAGGCCGAGGCGGCGCTGCAGGCCGCCGCCGGCGCGCGGCTGGCGGCGCAGCTGCAGCGGCTCAAGGCGCAGGCCGACGCCAGGGACGACGCGGAGGAGCAGCTCAAGCAGGAGCGGAGGAAACTGCAGAGAGAGGTCAGTCACTACTCAGTGGAGGCCGAGGCGGCGCTGCAGGCCGCCGCCGGCGCGCGGCTGGCGGCGCAGCTGCAGCGGCTCAAGGCGCAGGCCGACGCCAGGGACGACGCGGAGGAGCAGCTCAAGCAGGAGCGGAGGAAACTGCAGAGAGAGGTCAGTCACTACTCAGTGGAGGCCGAGGCGGCGCTGCAGGCCGCCGCCGGCGCGCGGCTGGCGGCGCAGCTGCAGCGGCTCAAGGCGCAGGCCGACGCCAGGGACGACGCGGAGGAGCAGCTCAAGCAGGAGCGGAGGAAACTGCAGAGAGAGGTCAGTCACTACTCAGTGGAGGCCGAGGCGGCGCTGCAGGCCGCCGCCGGCGCGCGGCTGGCGGCGCAGCTGCAGCGGCTCAAGGCGCAGGCCGACGCCAGGGACGACGCGGAGGAGCAGCTCAAGCAGGAGCGGAGGAAACTGCAGAGAGAGGTCAGTCACTACTCAGTGGAGGCCGAGGCGGCGCTGCAGGCCGCCGCCGGCGCGCGGCTGGCGGCGCAGCTGCAGCGGCTCAAGGCGCAGGCCGACGCCAGGGACGACGCGGAGGAGCAGCTCAAGCAGGAGCGGAGGAAACTGCAGAGAGAGGTCAGTCACTACTCAGTGGAGGCCGAGGCGGCGCTGCAGGCCGCCGCCGGCGCGCGGCTGGCGGCGCAGCTGCAGCGGCTCAAGGCGCAGGCCGACGCCAGGGACGACGCGGAGGAGCAGCTCAAGCAGGAGCGGAGGAAACTGCAGAGAGAGGTCAGTCACTACTCAGTGGAGGCCGAGGCGGCGCTGCAGGCCGCCGCCGGCGCGCGGCTGGCGGCGCAGCTGCAGCGGCTCAAGGCGCAGGCCGACGCCAGGGACGACGCGGAGGAGCAGCTCAAGCAGGAGCGGAGGAAACTGCAGAGAGAGGTCAGTCACTACTCAGTGGAGGCCGAGGCGGCGCTGCAGGCCGCCGCCGGCGCGCGGCTGGCGGCGCAGCTGCAGCGGCTCAAGGCGCAGGCCGACGCCAGGGACGACGCGGAGGAGCAGCTCAAGCAGGAGCGGAGGAAACTGCAGAGAGAGGTCAGTCACTACTCAGTGGAGGCCGAGGCGGCGCTGCAGGCCGCCGCCGGCGCGCGGCTGGCGGCGCAGCTGCAGCGGCTCAAGGCGCAGGCCGACGCCAGGGACGACGCGGAGGAGCAGCTCAAGCAGGAGCGGAGGAAACTGCAGAGAGAGGTCAGTCACTACTCAGTGGAGGCCGAGGCGGCGCTGCAGGCCGCCGCCGGCGCGCGGCTGGCGGCGCAGCTGCAGCGGCTCAAGGCGCAGGCCGACGCCAGGGACGACGCGGAGGAGCAGCTCAAGCAGGAGCGGAGGAAACTGCAGAGAGAGGTCAGTCACTACTCAGTGGAGGCCGAGGCGGCGCTGCAGGCCGCCGCCGGCGCGCGGCTGGCGGCGCAGCTGCAGCGGCTCAAGGCGCAGGCCGACGCCAGGGACGACGCGGAGGAGCAGCTCAAGCAGGAGCGGAGGAAACTGCAGAGAGAGGTCAGTCACTACTCAGTGGAGGCCGAGGCGGCGCTGCAGGCCGCCGCCGGCGCGCGGCTGGCGGCGCAGCTGCAGCGGCTCAAGGCGCAGGCCGACGCCAGGGACGACGCGGAGGAGCAGCTCAAGCAGGAGCGGAGGAAACTGCAGAGAGAGGTCAGTCACTACTCAGTGGAGGCCGAGGCGGCGCTGCAGGCCGCCGCCGGCGCGCGGCTGGCGGCGCAGCTGCAGCGGCTCAAGGCGCAGGCCGACGCCAGGGACGACGCGGAGGAGCAGCTCAAGCAGGAGCGGAGGAAACTGCAGAGAGAGGTCAGTCACTACTCAGTGGAGGCCGAGGCGGCGCTGCAGGCCGCCGCCGGCGCGCGGCTGGCGGCGCAGCTGCAGCGGCTCAAGGCGCAGGCCGACGCCAGGGACGACGCGGAGGAGCAGCTCAAGCAGGAGCGGAGGAAACTGCAGAGAGAGGTCAGTCACTACTCAGTGGAGGCCGAGGCGGCGCTGCAGGCCGCCGCCGGCGCGCGGCTGGCGGCGCAGCTGCAGCGGCTCAAGGCGCAGGCCGACGCCAGGGACGACGCGGAGGAGCAGCTCAAGCAGGAGCGGAGGAAACTGCAGAGAGAGGTCAGTCACTACTCAGTGGAGGCCGAGGCGGCGCTGCAGGCCGCCGCCGGCGCGCGGCTGGCGGCGCAGCTGCAGCGGCTCAAGGCGCAGGCCGACGCCAGGGACGACGCGGAGGAGCAGCTCAAGCAGGAGCGGAGGAAACTGCAGAGAGAGGTCAGTCACTACTCAGTGGAGGCCGAGGCGGCGCTGCAGGCCGCCGCCGGCGCGCGGCTGGCGGCGCAGCTGCAGCGGCTCAAGGCGCAGGCCGACGCCAGGGACGACGCGGAGGAGCAGCTCAAGCAGGAGCGGAGGAAACTGCAGAGAGAGGTCAGTCACTACTCAGTGGAGGCCGAGGCGGCGCTGCAGGCCGCCGCCGGCGCGCGGCTGGCGGCGCAGCTGCAGCGGCTCAAGGCGCAGGCCGACGCCAGGGACGACGCGGAGGAGCAGCTCAAGCAGGAGCGGAGGAAACTGCAGAGAGAGGTCAGTCACTACTCAGTGGAGGCCGAGGCGGCGCTGCAGGCCGCCGCCGGCGCGCGGCTGGCGGCGCAGCTGCAGCGGCTCAAGGCGCAGGCCGACGCCAGGGACGACGCGGAGGAGCAGCTCAAGCAGGAGCGGAGGAAACTGCAGAGAGAGGTCAGTCACTACTCAGTGGAGGCCGAGGCGGCGCTGCAGGCCGCCGCCGGCGCGCGGCTGGCGGCGCAGCTGCAGCGGCTCAAGGCGCAGGCCGACGCCAGGGACGACGCGGAGGAGCAGCTCAAGCAGGAGCGGAGGAAACTGCAGAGAGAGGTCAGTCACTACTCAGTGGAGGCCGAGGCGGCGCTGCAGGCCGCCGCCGGCGCGCGGCTGGCGGCGCAGCTGCAGCGGCTCAAGGCGCAGGCCGACGCCAGGGACGACGCGGAGGAGCAGCTCAAGCAGGAGCGGAGGAAACTGCAGAGAGAGGTCAGTCACTACTCAGTGGAGGCCGAGGCGGCGCTGCAGGCCGCCGCCGGCGCGCGGCTGGCGGCGCAGCTGCAGCGGCTCAAGGCGCAGGCCGACGCCAGGGACGACGCGGAGGAGCAGCTCAAGCAGGAGCGGAGGAAACTGCAGAGAGAGGTCAGTCACTACTCAGTGGAGGCCGAGGCGGCGCTGCAGGCCGCCGCCGGCGCGCGGCTGGCGGCGCAGCTGCAGCGGCTCAAGGCGCAGGCCGACGCCAGGGACGACGCGGAGGAGCAGCTCAAGCAGGAGCGGAGGAAACTGCAGAGAGAGGTCAGTCACTACTCAGTGGAGGCCGAGGCGGCGCTGCAGGCCGCCGCCGGCGCGCGGCTGGCGGCGCAGCTGCAGCGGCTCAAGGCGCAGGCCGACGCCAGGGACGACGCGGAGGAGCAGCTCAAGCAGGAGCGGAGGAAACTGCAGAGAGAGGTCAGTCACTACTCAGTGGAGGCCGAGGCGGCGCTGCAGGCCGCCGCCGGCGCGCGGCTGGCGGCGCAGCTGCAGCGGCTCAAGGCGCAGGCCGACGCCAGGGACGACGCGGAGGAGCAGCTCAAGCAGGAGCGGAGGAAACTGCAGAGAGAGGTCAGTCACTACTCAGTGGAGGCCGAGGCGGCGCTGCAGGCCGCCGCCGGCGCGCGGCTGGCGGCGCAGCTGCAGCGGCTCAAGGCGCAGGCCGACGCCAGGGACGACGCGGAGGAGCAGCTCAAGCAGGAGCGGAGGAAACTGCAGAGAGAGGTCAGTCACTACTCAGTGGAGGCCGAGGCGGCGCTGCAGGCCGCCGCCGGCGCGCGGCTGGCGGCGCAGCTGCAGCGGCTCAAGGCGCAGGCCGACGCCAGGGACGACGCGGAGGAGCAGCTCAAGCAGGAGCGGAGGAAACTGCAGAGAGAGGTCAGTCACTACTCAGTGGAGGCCGAGGCGGCGCTGCAGGCCGCCGCCGGCGCGCGGCTGGCGGCGCAGCTGCAGCGGCTCAAGGCGCAGGCCGACGCCAGGGACGACGCGGAGGAGCAGCTCAAGCAGGAGCGGAGGAAACTGCAGAGAGAGGTCAGTCACTACTCAGTGGAGGCCGAGGCGGCGCTGCAGGCCGCCGCCGGCGCGCGGCTGGCGGCGCAGCTGCAGCGGCTCAAGGCGCAGGCCGACGCCAGGGACGACGCGGAGGAGCAGCTCAAGCAGGAGCGGAGGAAACTGCAGAGAGAGGTCAGTCACTACTCAGTGGAGGCCGAGGCGGCGCTGCAGGCCGCCGCCGGCGCGCGGCTGGCGGCGCAGCTGCAGCGGCTCAAGGCGCAGGCCGACGCCAGGGACGACGCGGAGGAGCAGCTCAAGCAGGAGCGGAGGAAACTGCAGAGAGAGGTCAGTCACTACTCAGTGGAGGCCGAGGCGGCGCTGCAGGCCGCCGCCGGCGCGCGGCTGGCGGCGCAGCTGCAGCGGCTCAAGGCGCAGGCCGACGCCAGGGACGACGCGGAGGAGCAGCTCAAGCAGGAGCGGAGGAAACTGCAGAGAGAGGTCAGTCACTACTCAGTGGAGGCCGAGGCGGCGCTGCAGGCCGCCGCCGGCGCGCGGCTGGCGGCGCAGCTGCAGCGGCTCAAGGCGCAGGCCGACGCCAGGGACGACGCGGAGGAGCAGCTCAAGCAGGAGCGGAGGAAACTGCAGAGAGAGGTCAGTCACTACTCAGTGGAGGCCGAGGCGGCGCTGCAGGCCGCCGCCGGCGCGCGGCTGGCGGCGCAGCTGCAGCGGCTCAAGGCGCAGGCCGACGCCAGGGACGACGCGGAGGAGCAGCTCAAGCAGGAGCGGAGAAAACTGCAGAGAGAGGCCCGAGAGGCGCTAAACCGAGTGGAGGAGCTCGAGACGGAGAACAGCCACCTCACCAAGCGGCTCGACAAACTCAAGAACGCCAAGTCCGCGCTACTCAAGGAGCTGTGA
Protein Sequence: MTQIMGLQSKSATPDNSDEESGEAFTDGDFGDSDDEINIDVDIVDRSDDSKTSPVPVETVNTELAGMEVAHGARNGFEHDHAKVNGFKSDDAECVAMPEIRRDSHGDQNPSIVGILGGQQDHAEQRLAARRAARAEAREIRMRELERQQREQEDHADKAYDMYAETVGRRAGTRLTALSPAVHHTPRRASEDSADDSFNVKDLRGELKEVEEKFRKAMILNAQLDNDKAALGYQIELLKDRIEELQEDYAQLQREHKEKCSAHERLKREHASLERELGAARDAVRARDAAAADAGFAFVDAAPAANGDEGQAHTFPPLALVSHQNEKLLNDAGEGTLDVRLQKLLSAKQSLEGEVRRLKLQLNEERHNGVARAHDQDLESELEALRKSNAEAKARAARAEAEAALQAAAGARLAAQLQRLKAQADARDDAEEQLKQERRKLQREVSHYSVEAEAALQAAAGARLAAQLQRLKAQADARDDAEEQLKQERRKLQREVSHYSVEAEAALQAAAGARLAAQLQRLKAQADARDDAEEQLKQERRKLQREVSHYSVEAEAALQAAAGARLAAQLQRLKAQADARDDAEEQLKQERRKLQREVSHYSVEAEAALQAAAGARLAAQLQRLKAQADARDDAEEQLKQERRKLQREVSHYSVEAEAALQAAAGARLAAQLQRLKAQADARDDAEEQLKQERRKLQREVSHYSVEAEAALQAAAGARLAAQLQRLKAQADARDDAEEQLKQERRKLQREVSHYSVEAEAALQAAAGARLAAQLQRLKAQADARDDAEEQLKQERRKLQREVSHYSVEAEAALQAAAGARLAAQLQRLKAQADARDDAEEQLKQERRKLQREVSHYSVEAEAALQAAAGARLAAQLQRLKAQADARDDAEEQLKQERRKLQREVSHYSVEAEAALQAAAGARLAAQLQRLKAQADARDDAEEQLKQERRKLQREVSHYSVEAEAALQAAAGARLAAQLQRLKAQADARDDAEEQLKQERRKLQREVSHYSVEAEAALQAAAGARLAAQLQRLKAQADARDDAEEQLKQERRKLQREVSHYSVEAEAALQAAAGARLAAQLQRLKAQADARDDAEEQLKQERRKLQREVSHYSVEAEAALQAAAGARLAAQLQRLKAQADARDDAEEQLKQERRKLQREVSHYSVEAEAALQAAAGARLAAQLQRLKAQADARDDAEEQLKQERRKLQREVSHYSVEAEAALQAAAGARLAAQLQRLKAQADARDDAEEQLKQERRKLQREVSHYSVEAEAALQAAAGARLAAQLQRLKAQADARDDAEEQLKQERRKLQREVSHYSVEAEAALQAAAGARLAAQLQRLKAQADARDDAEEQLKQERRKLQREVSHYSVEAEAALQAAAGARLAAQLQRLKAQADARDDAEEQLKQERRKLQREVSHYSVEAEAALQAAAGARLAAQLQRLKAQADARDDAEEQLKQERRKLQREVSHYSVEAEAALQAAAGARLAAQLQRLKAQADARDDAEEQLKQERRKLQREVSHYSVEAEAALQAAAGARLAAQLQRLKAQADARDDAEEQLKQERRKLQREVSHYSVEAEAALQAAAGARLAAQLQRLKAQADARDDAEEQLKQERRKLQREVSHYSVEAEAALQAAAGARLAAQLQRLKAQADARDDAEEQLKQERRKLQREVSHYSVEAEAALQAAAGARLAAQLQRLKAQADARDDAEEQLKQERRKLQREVSHYSVEAEAALQAAAGARLAAQLQRLKAQADARDDAEEQLKQERRKLQREVSHYSVEAEAALQAAAGARLAAQLQRLKAQADARDDAEEQLKQERRKLQREVSHYSVEAEAALQAAAGARLAAQLQRLKAQADARDDAEEQLKQERRKLQREVSHYSVEAEAALQAAAGARLAAQLQRLKAQADARDDAEEQLKQERRKLQREVSHYSVEAEAALQAAAGARLAAQLQRLKAQADARDDAEEQLKQERRKLQREVSHYSVEAEAALQAAAGARLAAQLQRLKAQADARDDAEEQLKQERRKLQREVSHYSVEAEAALQAAAGARLAAQLQRLKAQADARDDAEEQLKQERRKLQREVSHYSVEAEAALQAAAGARLAAQLQRLKAQADARDDAEEQLKQERRKLQREVSHYSVEAEAALQAAAGARLAAQLQRLKAQADARDDAEEQLKQERRKLQREVSHYSVEAEAALQAAAGARLAAQLQRLKAQADARDDAEEQLKQERRKLQREVSHYSVEAEAALQAAAGARLAAQLQRLKAQADARDDAEEQLKQERRKLQREAREALNRVEELETENSHLTKRLDKLKNAKSALLKEL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -