Basic Information

Insect: Epinotia demarniana
Gene Symbol: -
Assembly: GCA_945869435.1
Location: CAMBUM010000457.1:35486-43556[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 9.9e-05 0.0096 17.8 4.6 1 23 134 156 134 156 0.97

2 14 1.1e-05 0.0011 20.8 3.2 1 23 162 184 162 184 0.98

3 14 2.8e-05 0.0028 19.5 0.7 1 23 190 212 190 212 0.95

4 14 6.9e-05 0.0067 18.3 2.2 1 23 218 240 218 240 0.98

5 14 2.5e-07 2.4e-05 26.0 1.7 1 23 275 297 275 297 0.98

6 14 0.00018 0.017 17.0 0.7 1 23 301 323 301 323 0.98

7 14 0.00027 0.026 16.4 4.2 1 23 329 351 329 351 0.97

8 14 0.047 4.5 9.4 0.4 1 23 357 379 357 379 0.97

9 14 0.00034 0.033 16.1 2.3 1 23 387 409 387 409 0.97

10 14 0.00073 0.072 15.0 2.9 1 23 415 437 415 437 0.97

11 14 1.4e-05 0.0014 20.5 0.1 1 23 443 465 443 465 0.97

12 14 1.7e-06 0.00016 23.3 5.0 1 23 471 493 471 493 0.98

13 14 0.0042 0.41 12.7 2.8 1 23 499 521 499 521 0.96

14 14 5.6e-06 0.00055 21.7 2.7 1 23 527 550 527 550 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	9.9e-05	0.0096	17.8	4.6	1	23	134	156	134	156	0.97
2	14	1.1e-05	0.0011	20.8	3.2	1	23	162	184	162	184	0.98
3	14	2.8e-05	0.0028	19.5	0.7	1	23	190	212	190	212	0.95
4	14	6.9e-05	0.0067	18.3	2.2	1	23	218	240	218	240	0.98
5	14	2.5e-07	2.4e-05	26.0	1.7	1	23	275	297	275	297	0.98
6	14	0.00018	0.017	17.0	0.7	1	23	301	323	301	323	0.98
7	14	0.00027	0.026	16.4	4.2	1	23	329	351	329	351	0.97
8	14	0.047	4.5	9.4	0.4	1	23	357	379	357	379	0.97
9	14	0.00034	0.033	16.1	2.3	1	23	387	409	387	409	0.97
10	14	0.00073	0.072	15.0	2.9	1	23	415	437	415	437	0.97
11	14	1.4e-05	0.0014	20.5	0.1	1	23	443	465	443	465	0.97
12	14	1.7e-06	0.00016	23.3	5.0	1	23	471	493	471	493	0.98
13	14	0.0042	0.41	12.7	2.8	1	23	499	521	499	521	0.96
14	14	5.6e-06	0.00055	21.7	2.7	1	23	527	550	527	550	0.97

Sequence Information

Coding Sequence: ATGGACGCACTGCATTCGTGCCGCTGCTGCCTACTGCGCCCTCCGGACAAGGGCCTCGACATGCTGTACACACATCTCGGCAAACCGGAGATATATTCAGATATGCTGAGAGAATGCTTCGATATACATgTAAGTTCAGGAAATGATGTGTGCGGTATCTGCGAGGTGTGTGTGGGCCGGCTGCGGGACGCGAGCAACTTCAAACATCAAGTGCAGCACAGCCAGATGGAGCTGCAGCGGCTGCAGGGAGCACCGAGTGGCACAGGTGAAGTAAAGATAGAGAGACAAGAATTCGACGTTGACATATCCCCAATTGGTGACGAGGAGACTCCACTGGCGTTCTTCGCGTCGACGcagcccgcccccgcccccgccccgcccgCAGCCCGCGGCGTCGTCCACATCTGCGACATATGCCAGAAGTCCTTCGACCACCACTCGGCGCTCGTCACTCACCGCCGCATCCACACAGGAGAGAAACCTTACACCTGCAATGTATGCCACAAACAATTCGCTCAAAAAGGCAACTTAAACGCTCATTTCAAATATCACATGGGGGATTATCGATTCTACTGCGAAATATGCAATAAAGGGTATACCCAAAAATCTACCCTACTCAAACATGCGGTGTCACACACTGGAGAAAAATCTCACACTTGCGAAGTATGCAATAAACAGTTTGCACTAAAAGGTTACTTGACTTCTCATTTAAAAACTCATTGGAAATCTGAACAAAATCGACACACAGAAAGAAAAGGTTGCGAAAAAAAGGGCGCACACGACGTCAATACTAATTCAAAAGATCGGGCAAGTGACAAACCATACGAAtgtgaaatatgtaaaaaacGGTTTGCACAGAAAAGCAACTTAAATTCTCATTTAAAGTATCATACAGCCCGGTTCTCTTGCAATCTGTGTGATCAAAAATTCACAGTGAAGTCTCGCTTAGATGCCCACATACTTCGTCACAAGAGGGGACAGATTTATGCTTGTGGAATATGCAATAAGCACTTTAAATCAAAAAGTGTGTTGACCCATCATTCGAAAATTCACCCAGGTGACTATCGATTTACTTGTGATGTATGTAACCAAAAATTTGAACTGAAAGAGATCATGCTACAACATATGCAAGTACACACGGAACCAAAGCAACATAATTTCTGCTGTGAAATATGTGGAAAAcagtttttgcaaaaaaattcTTTATCCAAACACATGGATGTACATATGGGAATAAGGCCATTCATTTGTGAAGTATGCAATAAAAGTTTCACACACAAAAACATCTTGAATTCCCATAAATTAACACACACTAATGAAAAGCCCTATGCTTGCGAAGTGTGTGATAAGCGATTCCGGCAGAGCAACGCTTTACAAGGCCACTTGTTGATTCACGAAGGTCTTAAACCACACACCTGCGAAGTATGTAAAAAGGAATTCAGACATAAATCTGCGTTGACAGTTCATATGCGACGACACACAGGACAAAAACCACATTGTTGTGACATATGTAAAAAGGAATATATAGTTTTAGCTGAATTAAAAATGCATTACCGCAGTCATACTGGGGAAAAACCATATGCTTGTCATATTTGTGACGCCAAATTTGCACGACCTGATCATTTCAGGAGACATCTTAAACGCGTTCACAACGAGAAGCCTCCGAAATCTGAAAAATCTCTTGTAATGTGA
Protein Sequence: MDALHSCRCCLLRPPDKGLDMLYTHLGKPEIYSDMLRECFDIHVSSGNDVCGICEVCVGRLRDASNFKHQVQHSQMELQRLQGAPSGTGEVKIERQEFDVDISPIGDEETPLAFFASTQPAPAPAPPAARGVVHICDICQKSFDHHSALVTHRRIHTGEKPYTCNVCHKQFAQKGNLNAHFKYHMGDYRFYCEICNKGYTQKSTLLKHAVSHTGEKSHTCEVCNKQFALKGYLTSHLKTHWKSEQNRHTERKGCEKKGAHDVNTNSKDRASDKPYECEICKKRFAQKSNLNSHLKYHTARFSCNLCDQKFTVKSRLDAHILRHKRGQIYACGICNKHFKSKSVLTHHSKIHPGDYRFTCDVCNQKFELKEIMLQHMQVHTEPKQHNFCCEICGKQFLQKNSLSKHMDVHMGIRPFICEVCNKSFTHKNILNSHKLTHTNEKPYACEVCDKRFRQSNALQGHLLIHEGLKPHTCEVCKKEFRHKSALTVHMRRHTGQKPHCCDICKKEYIVLAELKMHYRSHTGEKPYACHICDAKFARPDHFRRHLKRVHNEKPPKSEKSLVM

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00659133;
90% Identity: iTF_00659133;
80% Identity: iTF_00659133;