Basic Information

Insect: Epinotia demarniana
Gene Symbol: -
Assembly: GCA_945869435.1
Location: CAMBUM010000983.1:120150-121595[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 0.001 0.1 14.6 0.4 1 20 86 105 86 107 0.96

2 14 7.4e-06 0.00072 21.3 4.4 1 23 120 142 120 142 0.97

3 14 3.7e-05 0.0036 19.1 5.2 1 23 148 170 148 170 0.98

4 14 6.3e-06 0.00062 21.5 4.7 1 23 176 198 176 198 0.98

5 14 1.7e-06 0.00017 23.3 3.1 1 23 204 226 204 226 0.99

6 14 7.1e-05 0.0069 18.2 0.5 1 23 232 254 232 254 0.97

7 14 6.2e-05 0.006 18.4 3.0 1 23 261 283 261 283 0.99

8 14 0.0087 0.84 11.7 6.4 1 23 288 310 288 310 0.97

9 14 1.6e-06 0.00015 23.4 0.4 1 23 316 338 316 338 0.99

10 14 6e-08 5.8e-06 27.9 2.7 1 23 344 366 344 366 0.99

11 14 0.00019 0.018 16.9 3.2 1 23 372 394 372 394 0.98

12 14 5.9e-05 0.0057 18.5 0.6 3 23 402 422 401 422 0.97

13 14 5.6e-06 0.00055 21.7 1.2 1 23 428 450 428 450 0.98

14 14 0.00016 0.016 17.1 0.1 1 23 456 478 456 478 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	0.001	0.1	14.6	0.4	1	20	86	105	86	107	0.96
2	14	7.4e-06	0.00072	21.3	4.4	1	23	120	142	120	142	0.97
3	14	3.7e-05	0.0036	19.1	5.2	1	23	148	170	148	170	0.98
4	14	6.3e-06	0.00062	21.5	4.7	1	23	176	198	176	198	0.98
5	14	1.7e-06	0.00017	23.3	3.1	1	23	204	226	204	226	0.99
6	14	7.1e-05	0.0069	18.2	0.5	1	23	232	254	232	254	0.97
7	14	6.2e-05	0.006	18.4	3.0	1	23	261	283	261	283	0.99
8	14	0.0087	0.84	11.7	6.4	1	23	288	310	288	310	0.97
9	14	1.6e-06	0.00015	23.4	0.4	1	23	316	338	316	338	0.99
10	14	6e-08	5.8e-06	27.9	2.7	1	23	344	366	344	366	0.99
11	14	0.00019	0.018	16.9	3.2	1	23	372	394	372	394	0.98
12	14	5.9e-05	0.0057	18.5	0.6	3	23	402	422	401	422	0.97
13	14	5.6e-06	0.00055	21.7	1.2	1	23	428	450	428	450	0.98
14	14	0.00016	0.016	17.1	0.1	1	23	456	478	456	478	0.98

Sequence Information

Coding Sequence: ATGGTAAGAAGAAGACGCAAACGTCGAAGAGTGGTAGTGGAGTATGGCCGGCAGCCCGAGGAACAGCGGAAGTGGCTGAATGTAAACGGGGTACTATACTGGACGTGTTTTGTTTCAGACTCGCCCCGCCCCTCGCTGCCTGCGGCCTGCCCCACCCCCGCCCAGCTCCCCCGCGAGCCCGCCGTGACACAAAACGTGCCACTACTGATGATAGGAAGAACCAACTCTCTCCGACGTGCCCAGGGGACTAACATTTTCGAGTGCGACGCTTGCGCCAAATCGTACAAACGAAAACAGCATTTAGTGCGCCATATCGGCCAGTCCTGTCTGCAGAAGAGACTCCGCACGGCGAAAACACACACCTGCGAAATATGCCAAaagagttttagaaaattagaCAATTTGAAGTCTCACACTCGATATCATACGGGAGAGAGGCCCTACGCCTGCAAAATGTGTAAAAAACAGTTCGCGCACACGAGCCATCTGAAAAACCACGTCAGGATACACACTGGAGAAAAACCGCACTCCTGCGAATACTGTCAAAAACAGTTCGGTAATTTGAGCAATTTAAAGAGGCACAAGAGAACTCACACCGGAGAAAAACCTTACCCCTGTCAAATATGTAAAAGACACTTTTCGAACACGGGCGATTTGAAAAAGCATCTTCGAACGCACACTGGGGAGAAGCCTTATTGCTGTGAAATATGCCCTAAAAAGTTCGCGGAGCCGGGACAGTTAAGGTTACACAAACTGATCCACACGGGAAAAAAATGCCCATACACTTGCGAAATGTGTAATAAGCAATTCCTGCATCCGTATTCTTTGAGAAATCACATACGGAGTCACACCGGCGAGAAGCATCCCTGTGAAGTATGTAAAATGGAGTTTGACATGTACAGTCATTTGAAGCATCACAAGCGCAGTCACAAGGGAGCCAACCCATACACCTGCGACGTCTGTGGGCGAGAGTTCATGCAGTGGGCTCACTTAATGGCGCACAAACGGATCCACACTGGCGAGAGGCCATATACCTGCGAAACATGTAAAAAGAGCTTCAGAGAACTGAGTAATTTAAAGAGACACATACGAACACACACGGGTGAGAAGCCATATTCCTGTCAAAAATGCGACAAGGAGTTTGCGCACTTGAATCTCCTACATAACCACGCGCGAGTTCACACGGGGGAGAAACCGCCGTTCTGCGACGTATGTAACCGGGAGTTTTCGACGGCGCGCAACTTGAAAGTACACAAACTGATCCACACAGGTGAGAAGCCCCACGTCTGTGACGTGTGCAACAAGCAGTTCACTCAGGGCAGCTCGCTGAAGGCACACGCGCGGACACACACCGGGGAGAAACCATACCCGTGTGATGTATGCGCGAAGAGTTTCGCCTTGTTGGGCACTTTGAAGGCGCACAAGAGAAGACATGCTCAAGAATAG
Protein Sequence: MVRRRRKRRRVVVEYGRQPEEQRKWLNVNGVLYWTCFVSDSPRPSLPAACPTPAQLPREPAVTQNVPLLMIGRTNSLRRAQGTNIFECDACAKSYKRKQHLVRHIGQSCLQKRLRTAKTHTCEICQKSFRKLDNLKSHTRYHTGERPYACKMCKKQFAHTSHLKNHVRIHTGEKPHSCEYCQKQFGNLSNLKRHKRTHTGEKPYPCQICKRHFSNTGDLKKHLRTHTGEKPYCCEICPKKFAEPGQLRLHKLIHTGKKCPYTCEMCNKQFLHPYSLRNHIRSHTGEKHPCEVCKMEFDMYSHLKHHKRSHKGANPYTCDVCGREFMQWAHLMAHKRIHTGERPYTCETCKKSFRELSNLKRHIRTHTGEKPYSCQKCDKEFAHLNLLHNHARVHTGEKPPFCDVCNREFSTARNLKVHKLIHTGEKPHVCDVCNKQFTQGSSLKAHARTHTGEKPYPCDVCAKSFALLGTLKAHKRRHAQE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00656351;
90% Identity: iTF_00656351;
80% Identity: -