Basic Information

Insect: Epinotia bilunana
Gene Symbol: -
Assembly: GCA_947049265.1
Location: CAMRIQ010000092.1:84906-86306[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 1.9e-05 0.0016 19.9 0.6 1 20 71 90 71 92 0.96

2 14 7.5e-06 0.0006 21.2 4.5 1 23 105 127 105 127 0.98

3 14 3.6e-05 0.0029 19.1 3.9 3 23 135 155 133 155 0.98

4 14 1.8e-05 0.0015 20.0 3.9 1 23 161 183 161 183 0.98

5 14 8.5e-07 6.9e-05 24.2 2.5 1 23 189 211 189 211 0.99

6 14 6.3e-05 0.0052 18.3 0.5 1 23 217 239 217 239 0.97

7 14 0.00014 0.011 17.2 2.8 1 23 246 268 246 268 0.99

8 14 0.012 0.96 11.1 6.2 1 23 273 295 273 295 0.97

9 14 1.4e-06 0.00011 23.5 0.4 1 23 301 323 301 323 0.99

10 14 5.4e-08 4.3e-06 28.0 2.7 1 23 329 351 329 351 0.99

11 14 0.00013 0.01 17.3 4.0 1 23 357 379 357 379 0.98

12 14 1.6e-05 0.0013 20.2 0.3 3 23 387 407 386 407 0.97

13 14 8.7e-06 0.00071 21.0 1.2 1 23 413 435 413 435 0.97

14 14 0.00011 0.0086 17.6 0.1 1 23 441 463 441 463 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	1.9e-05	0.0016	19.9	0.6	1	20	71	90	71	92	0.96
2	14	7.5e-06	0.0006	21.2	4.5	1	23	105	127	105	127	0.98
3	14	3.6e-05	0.0029	19.1	3.9	3	23	135	155	133	155	0.98
4	14	1.8e-05	0.0015	20.0	3.9	1	23	161	183	161	183	0.98
5	14	8.5e-07	6.9e-05	24.2	2.5	1	23	189	211	189	211	0.99
6	14	6.3e-05	0.0052	18.3	0.5	1	23	217	239	217	239	0.97
7	14	0.00014	0.011	17.2	2.8	1	23	246	268	246	268	0.99
8	14	0.012	0.96	11.1	6.2	1	23	273	295	273	295	0.97
9	14	1.4e-06	0.00011	23.5	0.4	1	23	301	323	301	323	0.99
10	14	5.4e-08	4.3e-06	28.0	2.7	1	23	329	351	329	351	0.99
11	14	0.00013	0.01	17.3	4.0	1	23	357	379	357	379	0.98
12	14	1.6e-05	0.0013	20.2	0.3	3	23	387	407	386	407	0.97
13	14	8.7e-06	0.00071	21.0	1.2	1	23	413	435	413	435	0.97
14	14	0.00011	0.0086	17.6	0.1	1	23	441	463	441	463	0.98

Sequence Information

Coding Sequence: ATGGCCGGCAGCGCGAGGAACAGTGGGAAGTGGCTGAATGTAAACGGGGTATTATACTGGACGTGTTTTGTTTCAGACTCGCCCCGCCCCTCGCTGCCTGCGGCCTGCCCCACCCCCGCCCAGCTCCCCCGCGAGCCCGACGCGACACAAAACGTGCCACGACTGATAGGAAGAACCAACTCTCTCCGACGTTCCGAGGAGACTAACATTTTCGAGTGCAACGCTTGCGGCAAATCGTACAAACGAAAACAGCATTTAGTGCGCCATATCGGCCAGTCCTGTCTGCAGAAGAAACCCCGCACGGCGAAAACACACACCTGCGAAATATGCCAAAAGAGGTTTAGAAAATTAGACAATTTGAAGTCTCACACGCGATCTCATACGGGAGAGAGACCCTACGGCtgcaaaatatgtaaaaaagagTTCGCGCACACAAGCCATCTGAAGAACCACGTCAGGATACACACTGGAGAAAAACCGCACTCCTGCGAATACTGTCTAAAACAGTTTGGTAATTTGAGCAATTTAAAGAGGCACACGAGAACTCACACCGGAGAAAAACCTTACCCCTGTGAAATATGTAAAAGACACTTTTCGAACACGGGTGATTTGAAAAAACATCTTCGGACGCACACCGGGGAGAAGCCTTATTGCTGTGAAATATGTCCTAAAAAGTTCGCGGAGCCGGGACAGTTGAGGTTACACAAACTGATCCACACAGGAGAAAAATCCCCATACACTTGCGAAATATGTTATAAGCAATTCCTGCATCCGTATTCTTTGAGGAATCACATACGGAGTCACACCGGCGAGAAGCATCCCTGTGAAGTATGTAAAATGGAGTTTGACTTGTACAGTCACTTGAAGCATCACAAGCGCAGTCACAAGGGAGCCAACCCATACACCTGCGACGTCTGCGGGCGAGAGTTCATGCAGTGGGCTCATTTAATGGCGCACAAACGGATCCACACTGGCGAGAGGCCATATACCTGCGAAACATGTAAAAAGAGCTTCAGAGAACTGAGTAATTTAAAGAGACACATACGAACACACACGGGTGAGAAGCCATATTCCTGTCAAAAATGCGACAAGAACTTTGCGCACTTGAATCTCCTACATAACCACGTGCGAGTCCACACGGGGGAGAAACCGCCGTTCTGCGACGTATGTGGCCGGGAGTTTTCGACGGCGCGCAACTTGAAAGTGCACAAACTGATCCACACAGGTGAGAAGCCCCACATCTGTGACGTGTGCAACAAGCAGTTCACGCAGGGGAGCTCGCTGAAGGCACACGCGCGGACACATACTGGGGAGAAACCATACCCGTGTGATATATGCGCGAAGAGTTTCGCCTTGTTGGGCACTTTAAAGGCGCACAAGAGAATACACGCTCAAGAATAG
Protein Sequence: MAGSARNSGKWLNVNGVLYWTCFVSDSPRPSLPAACPTPAQLPREPDATQNVPRLIGRTNSLRRSEETNIFECNACGKSYKRKQHLVRHIGQSCLQKKPRTAKTHTCEICQKRFRKLDNLKSHTRSHTGERPYGCKICKKEFAHTSHLKNHVRIHTGEKPHSCEYCLKQFGNLSNLKRHTRTHTGEKPYPCEICKRHFSNTGDLKKHLRTHTGEKPYCCEICPKKFAEPGQLRLHKLIHTGEKSPYTCEICYKQFLHPYSLRNHIRSHTGEKHPCEVCKMEFDLYSHLKHHKRSHKGANPYTCDVCGREFMQWAHLMAHKRIHTGERPYTCETCKKSFRELSNLKRHIRTHTGEKPYSCQKCDKNFAHLNLLHNHVRVHTGEKPPFCDVCGREFSTARNLKVHKLIHTGEKPHICDVCNKQFTQGSSLKAHARTHTGEKPYPCDICAKSFALLGTLKAHKRIHAQE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00658652;
90% Identity: iTF_00658652;
80% Identity: -