Basic Information

Insect: Epinotia demarniana
Gene Symbol: -
Assembly: GCA_945869435.1
Location: CAMBUM010000701.1:40498-53086[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 8.9e-05 0.0086 17.9 7.7 1 23 164 186 164 186 0.98

2 15 2.6e-05 0.0025 19.6 5.5 1 23 192 214 192 214 0.97

3 15 0.0036 0.35 12.9 4.3 1 23 220 242 220 242 0.98

4 15 7.7e-07 7.5e-05 24.4 0.9 1 23 248 270 248 270 0.99

5 15 1.3e-05 0.0013 20.5 4.9 1 23 315 337 315 337 0.97

6 15 0.0039 0.38 12.8 2.8 1 23 341 363 341 363 0.97

7 15 0.0014 0.13 14.2 2.7 1 23 369 391 369 391 0.98

8 15 3e-05 0.0029 19.4 2.1 1 23 397 419 397 419 0.97

9 15 5.6e-06 0.00054 21.7 0.3 1 23 425 447 425 447 0.98

10 15 4.4e-05 0.0043 18.9 1.8 1 23 455 477 455 477 0.98

11 15 2.1e-07 2e-05 26.2 1.1 1 23 483 505 483 505 0.98

12 15 3.7e-06 0.00036 22.3 1.8 1 23 511 533 511 533 0.98

13 15 1.9e-05 0.0018 20.0 4.3 1 23 539 561 539 561 0.98

14 15 0.00045 0.043 15.7 0.7 1 23 567 589 567 589 0.97

15 15 8.7e-07 8.5e-05 24.2 3.6 1 23 595 618 595 618 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	8.9e-05	0.0086	17.9	7.7	1	23	164	186	164	186	0.98
2	15	2.6e-05	0.0025	19.6	5.5	1	23	192	214	192	214	0.97
3	15	0.0036	0.35	12.9	4.3	1	23	220	242	220	242	0.98
4	15	7.7e-07	7.5e-05	24.4	0.9	1	23	248	270	248	270	0.99
5	15	1.3e-05	0.0013	20.5	4.9	1	23	315	337	315	337	0.97
6	15	0.0039	0.38	12.8	2.8	1	23	341	363	341	363	0.97
7	15	0.0014	0.13	14.2	2.7	1	23	369	391	369	391	0.98
8	15	3e-05	0.0029	19.4	2.1	1	23	397	419	397	419	0.97
9	15	5.6e-06	0.00054	21.7	0.3	1	23	425	447	425	447	0.98
10	15	4.4e-05	0.0043	18.9	1.8	1	23	455	477	455	477	0.98
11	15	2.1e-07	2e-05	26.2	1.1	1	23	483	505	483	505	0.98
12	15	3.7e-06	0.00036	22.3	1.8	1	23	511	533	511	533	0.98
13	15	1.9e-05	0.0018	20.0	4.3	1	23	539	561	539	561	0.98
14	15	0.00045	0.043	15.7	0.7	1	23	567	589	567	589	0.97
15	15	8.7e-07	8.5e-05	24.2	3.6	1	23	595	618	595	618	0.97

Sequence Information

Coding Sequence: ATGGACGCATTACTTTCGTGCCGCTGCTGCCTGCTGCGCCCTCCGGACAAAGGTCTCGACACGCTGTACAGCCATCTCGGCAAGACGGAGATTTATTCGGACATGCTGCGGGAATGCTTTGATATACATcTAAATTCAGCAAATGGCGAGTGTGGTATCTGCGAGGTGTGCGTCGCCCGGCTGCGGGACGCGAGCAACTTCAAGCAGCAAGTGCAGCGCAGCCAAGCGGAGCTGCTATCACGGATGCAGACACCCGGGAGTGCCAAAAGTGAGCAAGCTCGGAGTAATGCTGATATAAACCACCGACTACTCCAGCTTGAGTTGGAGAAGGCTTATAGTGACGAGACTGCAATGTGTGAAGTCAAGATGGAAAAGCCAGAATGCCAGGTCGAGATAAATGACAACAAACCACTGTCATCATACAGCACTCCGCCGGCGCCTCAGCCCGTCCCCGCCCCAGCCGCGCCCGCCCGCGGCATCGACGTAGTCCACACCTGCGATATATGCCACAAATCATTCGACCACCAGTCCGCGTTCAAACTCCACCGCCGCATGCACACAGGAGAGAAACCCTTCTCCTGCAATGTCTGCCACAAACGATTCTCACAAAAGGGCAACTTGACCTCCCATTTCAAATATCATATGGGGGACTACCGATACTTCTGTGAAGTATGCAATAAGAGGTTTACGCAAAAGTGCATCATGGTTAAACACATGCAGACGCACACTGGACAAAAACCCTACACCTGTGAAGTATGCGATAAGAAATTTACGCTAAAAAGTTATTTGGCCGCCCATTTAAAAACGCATTTAAAGTATGAAAGTAATGGCGAGAGCGCCGAAGAAAAGCCCGATTGCGAGGAAGAGGTCCCAAAAAAATCCAAGTTAATCGAAGACAACAGTTCTGATTCTAAAGATAACGCCAAGACAGAAAAAGCATTTCACGAGTGTGAAGTATGCAAGAAACGGTTTGCGCAGAAATGCAACTTGACTGCTCATATGAAAAATCATGCGTCAAGATTTTTCTGTGAACAATGCCAGAAGGAATTCGCTTGTAAGTCTAGCTTAAATGCCCATTTGCTACGTCACACGGGAGACCAAGTTTTCTCGTGTGACGTTTGCAGTAAAAAGTATAAATCGAAACGATCTCTAGACCTCCATCGAACTACTCACACAGGTGATTATAAATATACGTGCAACGTGTGCAATAAACAATTCGTACATAAAGAGACGATGACGCGACATATCATTGAACACACAGGAGAGAAACCTTACACCTGTGACATATGCAATAAAGCGTTTCCGGTTCAGACTGCTCTTAACCGACATAAGGAAACACATGGACCTAAGGGTGAAAAACGATTTAGGTGCGAACTTTGTAAGAAACTATTTTCGACTAAAAATTCCCTGGCTACACATATGGATAGGCACATGGGGAAGAAGCCATATATGTGCGAAATATGTAGCAAGACGTTCACAGACAAAAGCAATTTAAAAGTTCATAAAGCAACACACTCTGGCGAGAAATCGTACTCTTGCGAAATATGTCATAAGCGATTCCGGCAGAGCAGAGGCCTACAGGGTCACATGATGATCCACGAGGGAATCAAACAGCACACCTGCGAAGTATGCAGTAAGCTGTTTAGACATAAATCTGCTCTGATGGTCCATATGCGACGACACACAGGACAGAAACCGCATTCGTGCGACGTCTGTAAAAGGGAATTTATAGTTTTGGCTGAATTAAGAGTGCACTATCGTAGTCATACTGGGGAGAAACCGTTTGTTTGTCAAATTTGCGATAAGAAATTTGCACGGTCTAGTCATTACAGGCGACATCTTAAACGCGTGCACAACGAGAAGCCTTCGAAATATACTGTCCTGTAG
Protein Sequence: MDALLSCRCCLLRPPDKGLDTLYSHLGKTEIYSDMLRECFDIHLNSANGECGICEVCVARLRDASNFKQQVQRSQAELLSRMQTPGSAKSEQARSNADINHRLLQLELEKAYSDETAMCEVKMEKPECQVEINDNKPLSSYSTPPAPQPVPAPAAPARGIDVVHTCDICHKSFDHQSAFKLHRRMHTGEKPFSCNVCHKRFSQKGNLTSHFKYHMGDYRYFCEVCNKRFTQKCIMVKHMQTHTGQKPYTCEVCDKKFTLKSYLAAHLKTHLKYESNGESAEEKPDCEEEVPKKSKLIEDNSSDSKDNAKTEKAFHECEVCKKRFAQKCNLTAHMKNHASRFFCEQCQKEFACKSSLNAHLLRHTGDQVFSCDVCSKKYKSKRSLDLHRTTHTGDYKYTCNVCNKQFVHKETMTRHIIEHTGEKPYTCDICNKAFPVQTALNRHKETHGPKGEKRFRCELCKKLFSTKNSLATHMDRHMGKKPYMCEICSKTFTDKSNLKVHKATHSGEKSYSCEICHKRFRQSRGLQGHMMIHEGIKQHTCEVCSKLFRHKSALMVHMRRHTGQKPHSCDVCKREFIVLAELRVHYRSHTGEKPFVCQICDKKFARSSHYRRHLKRVHNEKPSKYTVL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00289867;
90% Identity: iTF_00656352;
80% Identity: -