Basic Information

Insect: Epinotia demarniana
Gene Symbol: -
Assembly: GCA_945869435.1
Location: CAMBUM010000789.1:688731-691872[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 0.00023 0.022 16.7 9.6 1 23 42 64 42 64 0.98

2 16 2.2e-05 0.0021 19.9 5.5 1 23 70 92 70 92 0.97

3 16 0.005 0.49 12.4 3.4 1 23 98 120 98 120 0.97

4 16 1e-06 0.0001 24.0 0.8 1 23 126 148 126 148 0.98

5 16 9.2e-06 0.0009 21.0 3.7 1 23 186 208 186 208 0.98

6 16 5.1e-06 0.00049 21.8 3.6 1 23 212 234 212 234 0.98

7 16 0.00028 0.027 16.4 4.8 1 23 240 262 240 262 0.98

8 16 8.5e-07 8.3e-05 24.3 3.1 1 23 268 290 268 290 0.98

9 16 0.00011 0.01 17.7 2.2 1 23 296 319 296 319 0.95

10 16 4.4e-07 4.3e-05 25.2 1.1 2 23 335 356 334 356 0.97

11 16 5e-06 0.00048 21.9 2.3 1 23 362 384 362 384 0.98

12 16 1.8e-06 0.00017 23.3 4.1 1 23 390 412 390 412 0.98

13 16 3.2e-06 0.00032 22.5 1.2 1 23 418 440 418 440 0.98

14 16 4.7e-06 0.00046 22.0 4.8 1 23 446 468 446 468 0.98

15 16 0.00029 0.028 16.3 1.0 1 23 474 496 474 496 0.97

16 16 1.1e-05 0.001 20.8 3.6 1 23 502 525 502 525 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	0.00023	0.022	16.7	9.6	1	23	42	64	42	64	0.98
2	16	2.2e-05	0.0021	19.9	5.5	1	23	70	92	70	92	0.97
3	16	0.005	0.49	12.4	3.4	1	23	98	120	98	120	0.97
4	16	1e-06	0.0001	24.0	0.8	1	23	126	148	126	148	0.98
5	16	9.2e-06	0.0009	21.0	3.7	1	23	186	208	186	208	0.98
6	16	5.1e-06	0.00049	21.8	3.6	1	23	212	234	212	234	0.98
7	16	0.00028	0.027	16.4	4.8	1	23	240	262	240	262	0.98
8	16	8.5e-07	8.3e-05	24.3	3.1	1	23	268	290	268	290	0.98
9	16	0.00011	0.01	17.7	2.2	1	23	296	319	296	319	0.95
10	16	4.4e-07	4.3e-05	25.2	1.1	2	23	335	356	334	356	0.97
11	16	5e-06	0.00048	21.9	2.3	1	23	362	384	362	384	0.98
12	16	1.8e-06	0.00017	23.3	4.1	1	23	390	412	390	412	0.98
13	16	3.2e-06	0.00032	22.5	1.2	1	23	418	440	418	440	0.98
14	16	4.7e-06	0.00046	22.0	4.8	1	23	446	468	446	468	0.98
15	16	0.00029	0.028	16.3	1.0	1	23	474	496	474	496	0.97
16	16	1.1e-05	0.001	20.8	3.6	1	23	502	525	502	525	0.97

Sequence Information

Coding Sequence: ATGGAGAAAACAGAAAACCAGGTGGATACGAGTGATGAGGAGAATAAACCATTGGCGACATACAGCAGTCCGCTGGCATCGTcaccgcccgcccccgccccgccccgTGGCACTGGCATAATGCACACCTGCAAGATATGCCAAAAATCCTTCGACCACCATTCAGCGCTCAAAAACCATCATCGCATTCACACAGGAGAAAAACCATTTTCGTGCAATGTCTGCCACAAGAGATTCTCACAAAAAGGTAACTTGACCTCCCATTTCAAATATCACATGGGTGATTATAGATTCTTTTGTGAAGTATGCAATAAGAGATTTACACAGAAGTGTATCATGGTTAAACATATGATGATACACACTGGAGTTAGACCTTACGCCTGTGAAGTGTGCGATAAAAGATTTACACTAAAAACCAATTTGACTGTTCATTTAAAAACCCATTTAAAATATGAACATAATAGTGAACACGCAACAGAGAAGCCTTTAAGTGAGAAAAAGACGGAAGAGCCGGAGAAGACTAATTCAAAACATACAAAGTCAAAAGAGCCGTTTTTTGAATGTGAAGTGTGTAAAAAACGGTTTGCACAAAAATGCAATTTAAAAGCTCATTTAAAGTACCACACACCCCGATTCTCTTGCGACCAGTGCGAAAAGAAATTCACCTTTAAGTCTCACCTTAATGCTCATATTCTTCGTCACAAGGGCGAACCGATTTTCTCGTGCAGCGAATGCAGTAAACAGTATAAATCCAAACATTCTTTAAGTCTTCATTTAAAAACCCACACGGGTGATTATAAGTATACTTGCAGTGAGTGCAACAAACAATTCGTACATAAGGAGACTTTGAAACGACATATGCTCGTGCACACTGGAGAGAGAGCCTTTGCCTGTGATATATGCCATAAGACTTTCCCTCTAAAGGGCACCTTGAAGTCTCATCTAAAATACAGACACGGTCAAGGTGTAGAAAGTAACACGAGAGACACATCGTCATCATTAACCTGCGAAACGTGCAACAAGCAATTCAGCCAAAGGTCTGCTCTAAACAGGCACATGCAAATACACACTGGAGAAAAACATTATAGCTGTGAAATCTGTAAAAAGCAATTTTCTCAAAAGAACTATTTGTCCAAACATCTTGAGACGCATTCCGGGAAAAGGCCATTCATGTGCGAAATCTGCAGTAAAACATTCACACATAAAAGCACTTTGAAAGCTCATAGATCGACGCATTCTGAAGAAAAACCATATGCCTGTGAAATATGTCACAAGCGATTCCGACAAAGCAAAGGATTGCAAGGACACATGATGATCCACCAGGGAATCAAACAACACACCTGCGATGTATGCAGTAAGCAATTCAGACATAAGTCCGCCCTAATGGTCCACATGCGACGACACACAGGACAGCGGCCACATTCTTGTGATATCTGCAAAAGGCAATTTATAGTTTTAGCTGAACTAAGAGTGCATTATCGTAGTCACACTGGAGAGAAACCATATGCGTGTGAAATATGTCACACGAAATTCGCGAGACCTGATCATTTCAGGAGACATCTTAAACGTGTTCACAACGAGAAGCCTACGAAATATACTGTACTTTAA
Protein Sequence: MEKTENQVDTSDEENKPLATYSSPLASSPPAPAPPRGTGIMHTCKICQKSFDHHSALKNHHRIHTGEKPFSCNVCHKRFSQKGNLTSHFKYHMGDYRFFCEVCNKRFTQKCIMVKHMMIHTGVRPYACEVCDKRFTLKTNLTVHLKTHLKYEHNSEHATEKPLSEKKTEEPEKTNSKHTKSKEPFFECEVCKKRFAQKCNLKAHLKYHTPRFSCDQCEKKFTFKSHLNAHILRHKGEPIFSCSECSKQYKSKHSLSLHLKTHTGDYKYTCSECNKQFVHKETLKRHMLVHTGERAFACDICHKTFPLKGTLKSHLKYRHGQGVESNTRDTSSSLTCETCNKQFSQRSALNRHMQIHTGEKHYSCEICKKQFSQKNYLSKHLETHSGKRPFMCEICSKTFTHKSTLKAHRSTHSEEKPYACEICHKRFRQSKGLQGHMMIHQGIKQHTCDVCSKQFRHKSALMVHMRRHTGQRPHSCDICKRQFIVLAELRVHYRSHTGEKPYACEICHTKFARPDHFRRHLKRVHNEKPTKYTVL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00658647;
90% Identity: iTF_00657469;
80% Identity: iTF_00658647;