Edem008292.1
Basic Information
- Insect
- Epinotia demarniana
- Gene Symbol
- Gcfc2
- Assembly
- GCA_945869435.1
- Location
- CAMBUM010000135.1:47259-55761[+]
Transcription Factor Domain
- TF Family
- GCFC
- Domain
- GCFC domain
- PFAM
- PF07842
- TF Group
- Unclassified Structure
- Description
- This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 4.1e-11 7e-07 30.6 1.1 4 94 106 169 103 185 0.78 2 2 0.00027 4.7 8.2 0.0 128 162 222 254 215 287 0.64
Sequence Information
- Coding Sequence
- atgatgatgagtaaagGTTATATGAAGTTGAATATCGCGAGTGCAGGTCGCGCGGGGAAGGCGGTGGATTCCGAGGAGAAGATCCGGCGCACAGCGGAGCGCgaggggcggcggcgcgcgcggcggctgcggcgcgaggcggcggcggcggcggccggcgcgcccccgccccgctcGCACCGCGACGGCGACTCCAGCGACGACGAGCTGCCGCCCAACGAGGAACACTACTACAGACAGGAGAAAGAGAGCAtccgcgcggcggcggcgggcgtgtTCGCGGACGCGCTGCCGGCGtggcgcagcgcgcgcggcgtgtGCGCGCGGCTAGCGCGCTGGCGGCGCCGCGATCCCGCGCTCTACGCGGAGGCCTACGTGCCCGACTGCCTGCCCAAGCTGCTCGCGCCGTATGTGCGCCACCAGCTTATTCTGTGGAATCCACTCGCTGACGAAGACAACGAAGATTACGAGAGGATGGATTGGTACAAATGGGTGATGATGTACGGGGTGCGCAACGAGAAGCTGTCGAGCGAGTCGGAGCAGTCGAGCGAGGAGGagggcggcggtggcggtggcggtggcgatggcggtggcggtggcggtggcggcgcggtgAGCGAGGCGAGCGTGCGCGCCGACCCCGACCTGCTACTCGCGCCCGCCGTCGTGTGCGGGGTCGTGCTGCCTAAGCTCGCAGAGCTAGTGGAGTGCGCGTGGGACCCGGTGTGCGTGCGCGCGTGCGTGCGGCTGCGGCAGCTGCTGGTGCGCGCGTGCGCGCTGccgggcgccgcgcccgcggccgcgcgcgtggcggccgcggcgcgcgccggcctgcagcgcgcgctgcACGCCGACGTCTTCCTGCCGCCGTTGCCGCTCAACCAGACGCTGGAGGGCGGTCACGGCGCGTTCTGGCGGCGCTGCCTCGGCGCCGGCGTGCGGCTgctgcgcgccgcgctcgcgctcACCGCGCCGCcggcgctgctgcgcgccgacGACGTCGCGCTCTCACTCATAGAGACGCTGAGcacgggcgcgggcgcgtgcgcgggcccggcggcggcggcggccgcggccgcgctcgcCGAGACGCTACCGCGCGGCGCcagcgagctgcgcgcgcgagcgctgcgccgcctcgcgcgcctcgccgcgctcgcgctcgaCCGCCTCGACCAGGCCAACCCGCTGCACATAAAAGCAGTGGAACAAGCCAAATCAGTGATAGCCGAGGCGCGGGCGGTGGAGTGA
- Protein Sequence
- MMMSKGYMKLNIASAGRAGKAVDSEEKIRRTAEREGRRRARRLRREAAAAAAGAPPPRSHRDGDSSDDELPPNEEHYYRQEKESIRAAAAGVFADALPAWRSARGVCARLARWRRRDPALYAEAYVPDCLPKLLAPYVRHQLILWNPLADEDNEDYERMDWYKWVMMYGVRNEKLSSESEQSSEEEGGGGGGGGDGGGGGGGGAVSEASVRADPDLLLAPAVVCGVVLPKLAELVECAWDPVCVRACVRLRQLLVRACALPGAAPAAARVAAAARAGLQRALHADVFLPPLPLNQTLEGGHGAFWRRCLGAGVRLLRAALALTAPPALLRADDVALSLIETLSTGAGACAGPAAAAAAAALAETLPRGASELRARALRRLARLAALALDRLDQANPLHIKAVEQAKSVIAEARAVE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00657218;
- 90% Identity
- iTF_00657218;
- 80% Identity
- -